RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 TTC6Q86TZ1 520 aa25.41■■□□□ 1.66
CHFR-217ENST00000540537 BOLA2Q9H3K6 86 aa25.41■■□□□ 1.66
CHFR-217ENST00000540537 PAG1Q9NWQ8 432 aa25.41■■□□□ 1.66
CHFR-217ENST00000540537 ZBTB21Q9ULJ3 1066 aa25.41■■□□□ 1.66
CHFR-217ENST00000540537 NAV1Q8NEY1 1877 aa25.4■■□□□ 1.66
CHFR-217ENST00000540537 BACE1P56817 501 aa25.4■■□□□ 1.66
CHFR-217ENST00000540537 TATDN1Q6P1N9 297 aa25.4■■□□□ 1.66
CHFR-217ENST00000540537 EDC3Q96F86 508 aaKnown RBP25.4■■□□□ 1.66
CHFR-217ENST00000540537 HAUS7Q99871 368 aa25.4■■□□□ 1.66
CHFR-217ENST00000540537 TMEM106CQ9BVX2 250 aa25.4■■□□□ 1.66
CHFR-217ENST00000540537 CRNKL1Q9BZJ0 848 aaKnown RBP25.4■■□□□ 1.66
CHFR-217ENST00000540537 SERPINB13Q9UIV8 391 aa25.4■■□□□ 1.66
CHFR-217ENST00000540537 MYPNQ86TC9 1320 aa25.39■■□□□ 1.66
CHFR-217ENST00000540537 MTMR2Q13614 643 aa25.39■■□□□ 1.66
CHFR-217ENST00000540537 SHROOM1Q2M3G4 852 aaPredicted RBP25.39■■□□□ 1.66
CHFR-217ENST00000540537 SH3TC2Q8TF17 1288 aa25.39■■□□□ 1.66
CHFR-217ENST00000540537 BRCA2P51587 3418 aa25.38■■□□□ 1.65
CHFR-217ENST00000540537 C19orf81C9J6K1 198 aa25.38■■□□□ 1.65
CHFR-217ENST00000540537 FAM110CQ1W6H9 321 aa25.38■■□□□ 1.65
CHFR-217ENST00000540537 RAET1EQ8TD07 263 aa25.38■■□□□ 1.65
CHFR-217ENST00000540537 DCTPP1Q9H773 170 aa25.38■■□□□ 1.65
CHFR-217ENST00000540537 TMOD4Q9NZQ9 345 aa25.38■■□□□ 1.65
CHFR-217ENST00000540537 USP17L10C9JJH3 530 aa25.37■■□□□ 1.65
CHFR-217ENST00000540537 SMARCA5O60264 1052 aaPredicted RBP25.37■■□□□ 1.65
CHFR-217ENST00000540537 ADD2P35612 726 aa25.37■■□□□ 1.65
CHFR-217ENST00000540537 GCLCP48506 637 aaPredicted RBP25.37■■□□□ 1.65
CHFR-217ENST00000540537 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.37■■□□□ 1.65
CHFR-217ENST00000540537 ASCC2Q9H1I8 757 aaPredicted RBP25.37■■□□□ 1.65
CHFR-217ENST00000540537 MYH7P12883 1935 aa25.37■■□□□ 1.65
CHFR-217ENST00000540537 PRKCZQ05513 592 aa25.36■■□□□ 1.65
CHFR-217ENST00000540537 ANKRD13CQ8N6S4 541 aa25.36■■□□□ 1.65
CHFR-217ENST00000540537 MKI67P46013 3256 aaKnown RBP25.36■■□□□ 1.65
CHFR-217ENST00000540537 GH2P01242 217 aa25.35■■□□□ 1.65
CHFR-217ENST00000540537 POLR3DP05423 398 aaPredicted RBP25.35■■□□□ 1.65
CHFR-217ENST00000540537 GRK4P32298 578 aa25.35■■□□□ 1.65
CHFR-217ENST00000540537 PLCD1P51178 756 aa25.35■■□□□ 1.65
CHFR-217ENST00000540537 LCORLQ8N3X6 602 aa25.35■■□□□ 1.65
CHFR-217ENST00000540537 EN2P19622 333 aaPredicted RBP25.34■■□□□ 1.65
CHFR-217ENST00000540537 HOXA7P31268 230 aaPredicted RBP25.34■■□□□ 1.65
CHFR-217ENST00000540537 CERKLQ49MI3 558 aaPredicted RBP25.34■■□□□ 1.65
CHFR-217ENST00000540537 MCM9Q9NXL9 1143 aa25.34■■□□□ 1.65
CHFR-217ENST00000540537 DOCK3Q8IZD9 2030 aa25.34■■□□□ 1.65
CHFR-217ENST00000540537 TNPO2O14787 897 aaKnown RBP25.33■■□□□ 1.65
CHFR-217ENST00000540537 SHMT1P34896 483 aa25.33■■□□□ 1.65
CHFR-217ENST00000540537 RRP1P56182 461 aaKnown RBP25.33■■□□□ 1.65
CHFR-217ENST00000540537 IRX3P78415 501 aaPredicted RBP25.33■■□□□ 1.65
CHFR-217ENST00000540537 GABPAQ06546 454 aa25.33■■□□□ 1.65
CHFR-217ENST00000540537 UBE3CQ15386 1083 aa25.33■■□□□ 1.65
CHFR-217ENST00000540537 SDR42E1Q8WUS8 393 aa25.33■■□□□ 1.65
CHFR-217ENST00000540537 DCP1AQ9NPI6 582 aaPredicted RBP25.33■■□□□ 1.65
CHFR-217ENST00000540537 ECHDC1Q9NTX5 307 aa25.33■■□□□ 1.65
CHFR-217ENST00000540537 GABRQQ9UN88 632 aa25.33■■□□□ 1.65
CHFR-217ENST00000540537 ABCB5Q2M3G0 1257 aa25.32■■□□□ 1.64
CHFR-217ENST00000540537 USP17L2Q6R6M4 530 aa25.32■■□□□ 1.64
CHFR-217ENST00000540537 SLAIN1Q8ND83 568 aa25.32■■□□□ 1.64
CHFR-217ENST00000540537 ARMT1Q9H993 441 aa25.32■■□□□ 1.64
CHFR-217ENST00000540537 MBD4O95243 580 aa25.31■■□□□ 1.64
CHFR-217ENST00000540537 MYCP01106 439 aaPredicted RBP25.31■■□□□ 1.64
CHFR-217ENST00000540537 PRPF38BQ5VTL8 546 aaKnown RBP25.31■■□□□ 1.64
CHFR-217ENST00000540537 ZSCAN25Q6NSZ9 544 aa25.31■■□□□ 1.64
CHFR-217ENST00000540537 COA7Q96BR5 231 aa25.31■■□□□ 1.64
CHFR-217ENST00000540537 GPATCH3Q96I76 525 aa25.31■■□□□ 1.64
CHFR-217ENST00000540537 CABP5Q9NP86 173 aa25.31■■□□□ 1.64
CHFR-217ENST00000540537 TAOK2Q9UL54 1235 aa25.31■■□□□ 1.64
CHFR-217ENST00000540537 FLT3LGP49771 235 aa25.3■■□□□ 1.64
CHFR-217ENST00000540537 IRF5Q13568 498 aa25.3■■□□□ 1.64
CHFR-217ENST00000540537 SLFNL1Q499Z3 407 aa25.3■■□□□ 1.64
CHFR-217ENST00000540537 C12orf42Q96LP6 360 aa25.3■■□□□ 1.64
CHFR-217ENST00000540537 EMILIN3Q9NT22 766 aa25.3■■□□□ 1.64
CHFR-217ENST00000540537 ATP8A2Q9NTI2 1148 aa25.3■■□□□ 1.64
CHFR-217ENST00000540537 MORF4L1Q9UBU8 362 aa25.3■■□□□ 1.64
CHFR-217ENST00000540537 PCDHB15Q9Y5E8 787 aa25.3■■□□□ 1.64
CHFR-217ENST00000540537 UBXN2AP68543 259 aa25.29■■□□□ 1.64
CHFR-217ENST00000540537 RAB3GAP1Q15042 981 aa25.29■■□□□ 1.64
CHFR-217ENST00000540537 MTFR1Q15390 333 aa25.29■■□□□ 1.64
CHFR-217ENST00000540537 P2RX7Q99572 595 aaKnown RBP25.29■■□□□ 1.64
CHFR-217ENST00000540537 FEZ1Q99689 392 aa25.29■■□□□ 1.64
CHFR-217ENST00000540537 BAZ2AQ9UIF9 1905 aaKnown RBP25.28■■□□□ 1.64
CHFR-217ENST00000540537 ADCY3O60266 1144 aa25.28■■□□□ 1.64
CHFR-217ENST00000540537 USP14P54578 494 aa25.28■■□□□ 1.64
CHFR-217ENST00000540537 HERVK_113P62684 666 aa25.28■■□□□ 1.64
CHFR-217ENST00000540537 PXYLP1Q8TE99 480 aa25.28■■□□□ 1.64
CHFR-217ENST00000540537 GTF3C2Q8WUA4 911 aaPredicted RBP25.28■■□□□ 1.64
CHFR-217ENST00000540537 BIN2Q9UBW5 565 aaPredicted RBP25.28■■□□□ 1.64
CHFR-217ENST00000540537 PRKAB2O43741 272 aa25.27■■□□□ 1.64
CHFR-217ENST00000540537 EVX2Q03828 476 aa25.27■■□□□ 1.64
CHFR-217ENST00000540537 KIAA1683Q9H0B3 1180 aa25.27■■□□□ 1.64
CHFR-217ENST00000540537 SWAP70Q9UH65 585 aa25.27■■□□□ 1.64
CHFR-217ENST00000540537 CHGBP05060 677 aa25.26■■□□□ 1.63
CHFR-217ENST00000540537 CYP2D6P10635 497 aa25.26■■□□□ 1.63
CHFR-217ENST00000540537 GUCY1A2P33402 732 aa25.26■■□□□ 1.63
CHFR-217ENST00000540537 MYH8P13535 1937 aa25.25■■□□□ 1.63
CHFR-217ENST00000540537 CCL5P13501 91 aa25.25■■□□□ 1.63
CHFR-217ENST00000540537 KBTBD3Q8NAB2 608 aa25.25■■□□□ 1.63
CHFR-217ENST00000540537 NKX2-3Q8TAU0 364 aa25.25■■□□□ 1.63
CHFR-217ENST00000540537 ACER1Q8TDN7 264 aa25.25■■□□□ 1.63
CHFR-217ENST00000540537 SEPT2Q15019 361 aa25.24■■□□□ 1.63
CHFR-217ENST00000540537 ZYXQ15942 572 aaKnown RBP25.24■■□□□ 1.63
CHFR-217ENST00000540537 AMOTL1Q8IY63 956 aa25.24■■□□□ 1.63
CHFR-217ENST00000540537 GPRC5AQ8NFJ5 357 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms