RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 FAM110CQ1W6H9 321 aa15.93■□□□□ 0.14
SEMA4D-223ENST00000540475 CRACR2BQ8N4Y2 399 aaPredicted RBP15.93■□□□□ 0.14
SEMA4D-223ENST00000540475 SMCR8Q8TEV9 937 aaPredicted RBP15.93■□□□□ 0.14
SEMA4D-223ENST00000540475 SAP30BPQ9UHR5 308 aaKnown RBP15.93■□□□□ 0.14
SEMA4D-223ENST00000540475 ZBTB21Q9ULJ3 1066 aa15.93■□□□□ 0.14
SEMA4D-223ENST00000540475 PLXNB2O15031 1838 aa15.93■□□□□ 0.14
SEMA4D-223ENST00000540475 GRK4P32298 578 aa15.92■□□□□ 0.14
SEMA4D-223ENST00000540475 USP5P45974 858 aa15.92■□□□□ 0.14
SEMA4D-223ENST00000540475 PRKCZQ05513 592 aa15.92■□□□□ 0.14
SEMA4D-223ENST00000540475 SLC9C2Q5TAH2 1124 aa15.92■□□□□ 0.14
SEMA4D-223ENST00000540475 RAET1EQ8TD07 263 aa15.92■□□□□ 0.14
SEMA4D-223ENST00000540475 PXYLP1Q8TE99 480 aa15.92■□□□□ 0.14
SEMA4D-223ENST00000540475 ASCC2Q9H1I8 757 aaPredicted RBP15.92■□□□□ 0.14
SEMA4D-223ENST00000540475 SERPINB13Q9UIV8 391 aa15.92■□□□□ 0.14
SEMA4D-223ENST00000540475 GABRQQ9UN88 632 aa15.92■□□□□ 0.14
SEMA4D-223ENST00000540475 MAGEB6P1A0A0J9YX57 407 aa15.91■□□□□ 0.14
SEMA4D-223ENST00000540475 USP17L10C9JJH3 530 aa15.91■□□□□ 0.14
SEMA4D-223ENST00000540475 GABPAQ06546 454 aa15.91■□□□□ 0.14
SEMA4D-223ENST00000540475 SHROOM1Q2M3G4 852 aaPredicted RBP15.91■□□□□ 0.14
SEMA4D-223ENST00000540475 TTC6Q86TZ1 520 aa15.91■□□□□ 0.14
SEMA4D-223ENST00000540475 ANKRD13CQ8N6S4 541 aa15.91■□□□□ 0.14
SEMA4D-223ENST00000540475 SLAIN1Q8ND83 568 aa15.91■□□□□ 0.14
SEMA4D-223ENST00000540475 HAUS7Q99871 368 aa15.91■□□□□ 0.14
SEMA4D-223ENST00000540475 MORF4L1Q9UBU8 362 aa15.91■□□□□ 0.14
SEMA4D-223ENST00000540475 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
SEMA4D-223ENST00000540475 MYH8P13535 1937 aa15.91■□□□□ 0.14
SEMA4D-223ENST00000540475 ZNF532Q9HCE3 1301 aa15.91■□□□□ 0.14
SEMA4D-223ENST00000540475 GOLIM4O00461 696 aa15.9■□□□□ 0.14
SEMA4D-223ENST00000540475 SLC34A2O95436 690 aa15.9■□□□□ 0.14
SEMA4D-223ENST00000540475 FLT3LGP49771 235 aa15.9■□□□□ 0.14
SEMA4D-223ENST00000540475 PLCD1P51178 756 aa15.9■□□□□ 0.14
SEMA4D-223ENST00000540475 MTMR2Q13614 643 aa15.9■□□□□ 0.14
SEMA4D-223ENST00000540475 MTFR1Q15390 333 aa15.9■□□□□ 0.14
SEMA4D-223ENST00000540475 C12orf42Q96LP6 360 aa15.9■□□□□ 0.14
SEMA4D-223ENST00000540475 TRIM34Q9BYJ4 488 aa15.9■□□□□ 0.14
SEMA4D-223ENST00000540475 BAZ2AQ9UIF9 1905 aaKnown RBP15.9■□□□□ 0.14
SEMA4D-223ENST00000540475 APBB1O00213 710 aa15.89■□□□□ 0.13
SEMA4D-223ENST00000540475 GDF11O95390 407 aa15.89■□□□□ 0.13
SEMA4D-223ENST00000540475 CAPN2P17655 700 aa15.89■□□□□ 0.13
SEMA4D-223ENST00000540475 SHMT1P34896 483 aa15.89■□□□□ 0.13
SEMA4D-223ENST00000540475 ADD2P35612 726 aa15.89■□□□□ 0.13
SEMA4D-223ENST00000540475 SLC4A8Q2Y0W8 1093 aa15.89■□□□□ 0.13
SEMA4D-223ENST00000540475 LRRCC1Q9C099 1032 aa15.89■□□□□ 0.13
SEMA4D-223ENST00000540475 DCTPP1Q9H773 170 aa15.89■□□□□ 0.13
SEMA4D-223ENST00000540475 EMILIN3Q9NT22 766 aa15.89■□□□□ 0.13
SEMA4D-223ENST00000540475 PAG1Q9NWQ8 432 aa15.89■□□□□ 0.13
SEMA4D-223ENST00000540475 GJD2Q9UKL4 321 aa15.89■□□□□ 0.13
SEMA4D-223ENST00000540475 TNPO2O14787 897 aaKnown RBP15.88■□□□□ 0.13
SEMA4D-223ENST00000540475 ECM2O94769 699 aaPredicted RBP15.88■□□□□ 0.13
SEMA4D-223ENST00000540475 GH2P01242 217 aa15.88■□□□□ 0.13
SEMA4D-223ENST00000540475 GJB1P08034 283 aa15.88■□□□□ 0.13
SEMA4D-223ENST00000540475 GJA8P48165 433 aa15.88■□□□□ 0.13
SEMA4D-223ENST00000540475 UBE2Q1Q7Z7E8 422 aa15.88■□□□□ 0.13
SEMA4D-223ENST00000540475 SHISA4Q96DD7 197 aa15.88■□□□□ 0.13
SEMA4D-223ENST00000540475 EDC3Q96F86 508 aaKnown RBP15.88■□□□□ 0.13
SEMA4D-223ENST00000540475 DNAJC2Q99543 621 aaKnown RBP15.88■□□□□ 0.13
SEMA4D-223ENST00000540475 P2RX7Q99572 595 aaKnown RBP15.88■□□□□ 0.13
SEMA4D-223ENST00000540475 CRNKL1Q9BZJ0 848 aaKnown RBP15.88■□□□□ 0.13
SEMA4D-223ENST00000540475 BOLA2Q9H3K6 86 aa15.88■□□□□ 0.13
SEMA4D-223ENST00000540475 TMOD4Q9NZQ9 345 aa15.88■□□□□ 0.13
SEMA4D-223ENST00000540475 ADCY3O60266 1144 aa15.87■□□□□ 0.13
SEMA4D-223ENST00000540475 CCL5P13501 91 aa15.87■□□□□ 0.13
SEMA4D-223ENST00000540475 UBXN2AP68543 259 aa15.87■□□□□ 0.13
SEMA4D-223ENST00000540475 UBE3CQ15386 1083 aa15.87■□□□□ 0.13
SEMA4D-223ENST00000540475 CERKLQ49MI3 558 aaPredicted RBP15.87■□□□□ 0.13
SEMA4D-223ENST00000540475 USP17L2Q6R6M4 530 aa15.87■□□□□ 0.13
SEMA4D-223ENST00000540475 LCORLQ8N3X6 602 aa15.87■□□□□ 0.13
SEMA4D-223ENST00000540475 NKX2-3Q8TAU0 364 aa15.87■□□□□ 0.13
SEMA4D-223ENST00000540475 COA7Q96BR5 231 aa15.87■□□□□ 0.13
SEMA4D-223ENST00000540475 KIAA1683Q9H0B3 1180 aa15.87■□□□□ 0.13
SEMA4D-223ENST00000540475 DCP1AQ9NPI6 582 aaPredicted RBP15.87■□□□□ 0.13
SEMA4D-223ENST00000540475 GUCY1A2P33402 732 aa15.86■□□□□ 0.13
SEMA4D-223ENST00000540475 HERVK_113P62684 666 aa15.86■□□□□ 0.13
SEMA4D-223ENST00000540475 ABCB5Q2M3G0 1257 aa15.86■□□□□ 0.13
SEMA4D-223ENST00000540475 POTEEQ6S8J3 1075 aa15.86■□□□□ 0.13
SEMA4D-223ENST00000540475 GTF3C2Q8WUA4 911 aaPredicted RBP15.86■□□□□ 0.13
SEMA4D-223ENST00000540475 ATP8A2Q9NTI2 1148 aa15.86■□□□□ 0.13
SEMA4D-223ENST00000540475 RBPJLQ9UBG7 517 aa15.86■□□□□ 0.13
SEMA4D-223ENST00000540475 RLFQ13129 1914 aa15.86■□□□□ 0.13
SEMA4D-223ENST00000540475 POLR3DP05423 398 aaPredicted RBP15.85■□□□□ 0.13
SEMA4D-223ENST00000540475 USP14P54578 494 aa15.85■□□□□ 0.13
SEMA4D-223ENST00000540475 IRX3P78415 501 aaPredicted RBP15.85■□□□□ 0.13
SEMA4D-223ENST00000540475 SDR42E1Q8WUS8 393 aa15.85■□□□□ 0.13
SEMA4D-223ENST00000540475 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.85■□□□□ 0.13
SEMA4D-223ENST00000540475 TXNRD2Q9NNW7 524 aa15.85■□□□□ 0.13
SEMA4D-223ENST00000540475 MCM9Q9NXL9 1143 aa15.85■□□□□ 0.13
SEMA4D-223ENST00000540475 SMARCA5O60264 1052 aaPredicted RBP15.84■□□□□ 0.13
SEMA4D-223ENST00000540475 MYCP01106 439 aaPredicted RBP15.84■□□□□ 0.13
SEMA4D-223ENST00000540475 EVX2Q03828 476 aa15.84■□□□□ 0.13
SEMA4D-223ENST00000540475 LBX2Q6XYB7 198 aa15.84■□□□□ 0.13
SEMA4D-223ENST00000540475 GPRC5AQ8NFJ5 357 aa15.84■□□□□ 0.13
SEMA4D-223ENST00000540475 RNF208Q9H0X6 261 aa15.84■□□□□ 0.13
SEMA4D-223ENST00000540475 ARMT1Q9H993 441 aa15.84■□□□□ 0.13
SEMA4D-223ENST00000540475 PAK6Q9NQU5 681 aaPredicted RBP15.84■□□□□ 0.13
SEMA4D-223ENST00000540475 ECHDC1Q9NTX5 307 aa15.84■□□□□ 0.13
SEMA4D-223ENST00000540475 SWAP70Q9UH65 585 aa15.84■□□□□ 0.13
SEMA4D-223ENST00000540475 PARP14Q460N5 1801 aa15.83■□□□□ 0.12
SEMA4D-223ENST00000540475 USP17L15C9J2P7 530 aa15.83■□□□□ 0.12
SEMA4D-223ENST00000540475 USP17L13C9JLJ4 530 aa15.83■□□□□ 0.12
SEMA4D-223ENST00000540475 USP17L11C9JVI0 530 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms