RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 SMC6Q96SB8 1091 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 UPF3BQ9BZI7 483 aaKnown RBP6.9□□□□□ -1.3
SNHG1-211ENST00000539921 FAM192AQ9GZU8 254 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 PCDH18Q9HCL0 1135 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 DMAP1Q9NPF5 467 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-211ENST00000539921 DNAAF2Q9NVR5 837 aaKnown RBP6.9□□□□□ -1.3
SNHG1-211ENST00000539921 TMOD4Q9NZQ9 345 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 ATXN10Q9UBB4 475 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 CFAP45Q9UL16 551 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 CCDC162PA2VCL2 907 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 LRRD1A4D1F6 860 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 C5orf60A6NFR6 353 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 TMEM221A6NGB7 291 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 TTLL13PA6NNM8 815 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 LRRIQ3A6PVS8 624 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-211ENST00000539921 HMGB1P1B2RPK0 211 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-211ENST00000539921 WNT7AO00755 349 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 SEMA3EO15041 775 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 FANCGO15287 622 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 TPD52L2O43399 206 aaKnown RBP6.89□□□□□ -1.31
SNHG1-211ENST00000539921 PFKFB2O60825 505 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 FLOT1O75955 427 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 WFS1O76024 890 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 BAG3O95817 575 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 FAM200BP0CF97 657 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 BCRP11274 1271 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 TOP1P11387 765 aaKnown RBP6.89□□□□□ -1.31
SNHG1-211ENST00000539921 TNFRSF8P28908 595 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 RANBP1P43487 201 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 GNG11P61952 73 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 VSNL1P62760 191 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 GNGT1P63211 74 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 ZBED6P86452 979 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 SNX1Q13596 522 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 ARID5BQ14865 1188 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 IFI16Q16666 785 aaKnown RBP6.89□□□□□ -1.31
SNHG1-211ENST00000539921 CCDC181Q5TID7 509 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 SFMBT2Q5VUG0 894 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 NAA35Q5VZE5 725 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 PPP4R3AQ6IN85 833 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 IQCEQ6IPM2 695 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 SEPT14Q6ZU15 432 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 OTUD6AQ7L8S5 288 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 FAM228AQ86W67 206 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 TMEM139Q8IV31 216 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 SIRT2Q8IXJ6 389 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 IQCF2Q8IXL9 164 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 CCDC65Q8IXS2 484 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 CCDC155Q8N6L0 562 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 NSMCE1Q8WV22 266 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 OPTNQ96CV9 577 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 FAM163AQ96GL9 167 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-211ENST00000539921 SPATA32Q96LK8 384 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 RUFY1Q96T51 708 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 PNKPQ96T60 521 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 SLC5A4Q9NY91 659 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 WDR35Q9P2L0 1181 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 IQSEC3Q9UPP2 1182 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-211ENST00000539921 ZNF148Q9UQR1 794 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 FRMD4BQ9Y2L6 1034 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 ZFYVE9O95405 1425 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 TROQ12816 1431 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-211ENST00000539921 CARMIL2Q6F5E8 1435 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 SETD1AO15047 1707 aaKnown RBP6.89□□□□□ -1.31
SNHG1-211ENST00000539921 CASZ1Q86V15 1759 aa6.89□□□□□ -1.31
SNHG1-211ENST00000539921 KNDC1Q76NI1 1749 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 CRYBG1Q9Y4K1 1723 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 GPATCH8Q9UKJ3 1502 aaKnown RBP6.88□□□□□ -1.31
SNHG1-211ENST00000539921 SALL3Q9BXA9 1300 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 ANKRD65E5RJM6 399 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 TBC1D12O60347 775 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 ATP6V1G1O75348 118 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 ATP6V1G2O95670 118 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 CCDC175P0C221 793 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 LINGO3P0C6S8 592 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 GNAT1P11488 350 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 FECHP22830 423 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 PAX3P23760 479 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 CCND1P24385 295 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 KIF5BP33176 963 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 CCT6AP40227 531 aaKnown RBP6.88□□□□□ -1.31
SNHG1-211ENST00000539921 USP14P54578 494 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 EXOSC9Q06265 439 aaKnown RBP6.88□□□□□ -1.31
SNHG1-211ENST00000539921 CKAP4Q07065 602 aaKnown RBP6.88□□□□□ -1.31
SNHG1-211ENST00000539921 CCDC15Q0P6D6 951 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 CUL4BQ13620 913 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 PKN1Q16512 942 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 Q4G0T1 1027 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 GLE1Q53GS7 698 aaKnown RBP6.88□□□□□ -1.31
SNHG1-211ENST00000539921 THEMIS2Q5TEJ8 643 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 FOXD4L5Q5VV16 416 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-211ENST00000539921 ZNF280DQ6N043 979 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 EMBQ6PCB8 327 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 TMC6Q7Z403 805 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 MAATS1Q7Z4T9 603 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 VSTM4Q8IW00 320 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 CD302Q8IX05 232 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 KRI1Q8N9T8 703 aaKnown RBP6.88□□□□□ -1.31
SNHG1-211ENST00000539921 EHBP1Q8NDI1 1231 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 ZC3H15Q8WU90 426 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms