RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 TMEM179Q6ZVK1 233 aa13.77□□□□□ -0.21
VTN-202ENST00000539746 METTL16Q86W50 562 aaKnown RBP13.77□□□□□ -0.21
VTN-202ENST00000539746 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.21
VTN-202ENST00000539746 ANKS1AQ92625 1134 aa13.77□□□□□ -0.21
VTN-202ENST00000539746 GTF3C6Q969F1 213 aa13.77□□□□□ -0.21
VTN-202ENST00000539746 DCPSQ96C86 337 aaKnown RBP13.77□□□□□ -0.21
VTN-202ENST00000539746 WDR33Q9C0J8 1336 aaKnown RBP13.77□□□□□ -0.21
VTN-202ENST00000539746 TDRD3Q9H7E2 651 aaKnown RBP13.77□□□□□ -0.21
VTN-202ENST00000539746 KANSL2Q9H9L4 492 aa13.77□□□□□ -0.21
VTN-202ENST00000539746 KCNQ5Q9NR82 932 aa13.77□□□□□ -0.21
VTN-202ENST00000539746 SAP30BPQ9UHR5 308 aaKnown RBP13.77□□□□□ -0.21
VTN-202ENST00000539746 NID2Q14112 1375 aa13.76□□□□□ -0.21
VTN-202ENST00000539746 WNT10BO00744 389 aa13.76□□□□□ -0.21
VTN-202ENST00000539746 CSPP1Q1MSJ5 1256 aa13.76□□□□□ -0.21
VTN-202ENST00000539746 CERKLQ49MI3 558 aaPredicted RBP13.76□□□□□ -0.21
VTN-202ENST00000539746 RBM26Q5T8P6 1007 aaKnown RBP13.76□□□□□ -0.21
VTN-202ENST00000539746 STOX1Q6ZVD7 989 aa13.76□□□□□ -0.21
VTN-202ENST00000539746 ZBED3Q96IU2 234 aaPredicted RBP13.76□□□□□ -0.21
VTN-202ENST00000539746 PRMT6Q96LA8 375 aaPredicted RBP13.76□□□□□ -0.21
VTN-202ENST00000539746 GBP4Q96PP9 640 aa13.76□□□□□ -0.21
VTN-202ENST00000539746 MXD3Q9BW11 206 aa13.76□□□□□ -0.21
VTN-202ENST00000539746 HACL1Q9UJ83 578 aa13.76□□□□□ -0.21
VTN-202ENST00000539746 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
VTN-202ENST00000539746 GLTPD2A6NH11 291 aa13.75□□□□□ -0.21
VTN-202ENST00000539746 TTLL1O95922 423 aa13.75□□□□□ -0.21
VTN-202ENST00000539746 TOP1P11387 765 aaKnown RBP13.75□□□□□ -0.21
VTN-202ENST00000539746 TOB2Q14106 344 aaPredicted RBP13.75□□□□□ -0.21
VTN-202ENST00000539746 APOA5Q6Q788 366 aa13.75□□□□□ -0.21
VTN-202ENST00000539746 SLC51AQ86UW1 340 aa13.75□□□□□ -0.21
VTN-202ENST00000539746 SULF1Q8IWU6 871 aa13.75□□□□□ -0.21
VTN-202ENST00000539746 IGDCC4Q8TDY8 1250 aa13.75□□□□□ -0.21
VTN-202ENST00000539746 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.75□□□□□ -0.21
VTN-202ENST00000539746 ARHGEF10LQ9HCE6 1279 aa13.75□□□□□ -0.21
VTN-202ENST00000539746 PNMA2Q9UL42 364 aa13.75□□□□□ -0.21
VTN-202ENST00000539746 DICER1Q9UPY3 1922 aaKnown RBP13.74□□□□□ -0.21
VTN-202ENST00000539746 MYO5AQ9Y4I1 1855 aaKnown RBP13.74□□□□□ -0.21
VTN-202ENST00000539746 GOLGA8AA7E2F4 631 aa13.74□□□□□ -0.21
VTN-202ENST00000539746 ASNSP08243 561 aa13.74□□□□□ -0.21
VTN-202ENST00000539746 SMARCA1P28370 1054 aa13.74□□□□□ -0.21
VTN-202ENST00000539746 PDIA3P30101 505 aaKnown RBP13.74□□□□□ -0.21
VTN-202ENST00000539746 GABPAQ06546 454 aa13.74□□□□□ -0.21
VTN-202ENST00000539746 RTN1Q16799 776 aa13.74□□□□□ -0.21
VTN-202ENST00000539746 TEX2Q8IWB9 1127 aa13.74□□□□□ -0.21
VTN-202ENST00000539746 NBPF3Q9H094 633 aa13.74□□□□□ -0.21
VTN-202ENST00000539746 LY9Q9HBG7 655 aa13.74□□□□□ -0.21
VTN-202ENST00000539746 TPCN1Q9ULQ1 816 aa13.74□□□□□ -0.21
VTN-202ENST00000539746 ZNF541Q9H0D2 1346 aa13.73□□□□□ -0.21
VTN-202ENST00000539746 UNCXA6NJT0 531 aa13.73□□□□□ -0.21
VTN-202ENST00000539746 TCP10L2B9ZVM9 353 aa13.73□□□□□ -0.21
VTN-202ENST00000539746 YBX3P16989 372 aaKnown RBP eCLIP13.73□□□□□ -0.21
VTN-202ENST00000539746 RASA1P20936 1047 aa13.73□□□□□ -0.21
VTN-202ENST00000539746 TCP10Q12799 353 aa13.73□□□□□ -0.21
VTN-202ENST00000539746 ABCB5Q2M3G0 1257 aa13.73□□□□□ -0.21
VTN-202ENST00000539746 GPATCH4Q5T3I0 446 aaKnown RBP13.73□□□□□ -0.21
VTN-202ENST00000539746 TATDN1Q6P1N9 297 aa13.73□□□□□ -0.21
VTN-202ENST00000539746 USP48Q86UV5 1035 aa13.73□□□□□ -0.21
VTN-202ENST00000539746 ZNF654Q8IZM8 581 aa13.73□□□□□ -0.21
VTN-202ENST00000539746 CCDC12Q8WUD4 166 aaPredicted RBP13.73□□□□□ -0.21
VTN-202ENST00000539746 ANP32EQ9BTT0 268 aa13.73□□□□□ -0.21
VTN-202ENST00000539746 BRMS1Q9HCU9 246 aa13.73□□□□□ -0.21
VTN-202ENST00000539746 FAM198AQ9UFP1 575 aa13.73□□□□□ -0.21
VTN-202ENST00000539746 STX8Q9UNK0 236 aa13.73□□□□□ -0.21
VTN-202ENST00000539746 FOCADQ5VW36 1801 aa13.73□□□□□ -0.21
VTN-202ENST00000539746 SCN9AQ15858 1988 aa13.72□□□□□ -0.21
VTN-202ENST00000539746 STK36Q9NRP7 1315 aa13.72□□□□□ -0.21
VTN-202ENST00000539746 H3BQV1 296 aa13.72□□□□□ -0.21
VTN-202ENST00000539746 hCG_1984214I3L0E3 225 aa13.72□□□□□ -0.21
VTN-202ENST00000539746 MPHOSPH10O00566 681 aaKnown RBP13.72□□□□□ -0.21
VTN-202ENST00000539746 PPP1R12BO60237 982 aaPredicted RBP13.72□□□□□ -0.21
VTN-202ENST00000539746 PLCD1P51178 756 aa13.72□□□□□ -0.21
VTN-202ENST00000539746 APOBRQ0VD83 1088 aa13.72□□□□□ -0.21
VTN-202ENST00000539746 SAFBQ15424 915 aaKnown RBP eCLIP13.72□□□□□ -0.21
VTN-202ENST00000539746 ME3Q16798 604 aa13.72□□□□□ -0.21
VTN-202ENST00000539746 ASPRV1Q53RT3 343 aa13.72□□□□□ -0.21
VTN-202ENST00000539746 IFFO2Q5TF58 517 aa13.72□□□□□ -0.21
VTN-202ENST00000539746 NOL8Q76FK4 1167 aaKnown RBP13.72□□□□□ -0.21
VTN-202ENST00000539746 CCDC83Q8IWF9 413 aa13.72□□□□□ -0.21
VTN-202ENST00000539746 ZNF713Q8N859 430 aaPredicted RBP13.72□□□□□ -0.21
VTN-202ENST00000539746 ENAHQ8N8S7 591 aaPredicted RBP13.72□□□□□ -0.21
VTN-202ENST00000539746 FANCBQ8NB91 859 aa13.72□□□□□ -0.21
VTN-202ENST00000539746 ZNF341Q9BYN7 854 aa13.72□□□□□ -0.21
VTN-202ENST00000539746 AS3MTQ9HBK9 375 aa13.72□□□□□ -0.21
VTN-202ENST00000539746 NYAP2Q9P242 653 aa13.72□□□□□ -0.21
VTN-202ENST00000539746 CLRN2A0PK11 232 aa13.71□□□□□ -0.21
VTN-202ENST00000539746 PRDM1O75626 825 aa13.71□□□□□ -0.21
VTN-202ENST00000539746 ANTXR2P58335 489 aa13.71□□□□□ -0.21
VTN-202ENST00000539746 SSRP1Q08945 709 aaKnown RBP13.71□□□□□ -0.21
VTN-202ENST00000539746 NFIAQ12857 509 aa13.71□□□□□ -0.21
VTN-202ENST00000539746 RASA3Q14644 834 aa13.71□□□□□ -0.21
VTN-202ENST00000539746 SEC23AQ15436 765 aa13.71□□□□□ -0.21
VTN-202ENST00000539746 CYB5R4Q7L1T6 521 aa13.71□□□□□ -0.21
VTN-202ENST00000539746 MICU3Q86XE3 530 aa13.71□□□□□ -0.21
VTN-202ENST00000539746 PNMA1Q8ND90 353 aa13.71□□□□□ -0.21
VTN-202ENST00000539746 DEFB129Q9H1M3 183 aa13.71□□□□□ -0.21
VTN-202ENST00000539746 ZSCAN16Q9H4T2 348 aaPredicted RBP13.71□□□□□ -0.21
VTN-202ENST00000539746 GOPCQ9HD26 462 aa13.71□□□□□ -0.21
VTN-202ENST00000539746 DDX4Q9NQI0 724 aaKnown RBP13.71□□□□□ -0.21
VTN-202ENST00000539746 DDX60LQ5H9U9 1706 aaKnown RBP13.7□□□□□ -0.22
VTN-202ENST00000539746 COL4A5P29400 1685 aa13.7□□□□□ -0.22
VTN-202ENST00000539746 ECM29Q5VYK3 1845 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms