RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 GSG1L2A8MUP6 293 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 IRS4O14654 1257 aaPredicted RBP11.04□□□□□ -0.64
CDH13-204ENST00000539548 TBC1D8O95759 1140 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 STARD3NLO95772 234 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 FGFR2P21802 821 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 MAP3K12Q12852 859 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 HLFQ16534 295 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 RTN1Q16799 776 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 HSP90AA4PQ58FG1 418 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 LPIN2Q92539 896 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 PRDM11Q9NQV5 511 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 SAMSN1Q9NSI8 373 aaKnown RBP11.04□□□□□ -0.64
CDH13-204ENST00000539548 TMOD3Q9NYL9 352 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 PCDHB6Q9Y5E3 794 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 AKR1B15C9JRZ8 316 aaPredicted RBP11.03□□□□□ -0.64
CDH13-204ENST00000539548 PDE8AO60658 829 aa11.03□□□□□ -0.64
CDH13-204ENST00000539548 SEC31AO94979 1220 aaKnown RBP11.03□□□□□ -0.64
CDH13-204ENST00000539548 MBD4O95243 580 aa11.03□□□□□ -0.64
CDH13-204ENST00000539548 SART3Q15020 963 aaKnown RBP11.03□□□□□ -0.64
CDH13-204ENST00000539548 PUM3Q15397 648 aaKnown RBP11.03□□□□□ -0.64
CDH13-204ENST00000539548 JAKMIP3Q5VZ66 844 aa11.03□□□□□ -0.64
CDH13-204ENST00000539548 SPATA5Q8NB90 893 aa11.03□□□□□ -0.64
CDH13-204ENST00000539548 STAG1Q8WVM7 1258 aa11.03□□□□□ -0.64
CDH13-204ENST00000539548 COL5A2P05997 1499 aaPredicted RBP11.03□□□□□ -0.64
CDH13-204ENST00000539548 STRCP1A6NGW2 1772 aa11.03□□□□□ -0.64
CDH13-204ENST00000539548 MROH5Q6ZUA9 1318 aa11.03□□□□□ -0.64
CDH13-204ENST00000539548 MYH6P13533 1939 aa11.03□□□□□ -0.64
CDH13-204ENST00000539548 CCDC175P0C221 793 aa11.03□□□□□ -0.64
CDH13-204ENST00000539548 GPTP24298 496 aa11.03□□□□□ -0.64
CDH13-204ENST00000539548 WTAPQ15007 396 aa11.03□□□□□ -0.64
CDH13-204ENST00000539548 TRMT44Q8IYL2 757 aaKnown RBP11.03□□□□□ -0.64
CDH13-204ENST00000539548 MAGEB6Q8N7X4 407 aa11.03□□□□□ -0.64
CDH13-204ENST00000539548 NAA15Q9BXJ9 866 aaKnown RBP11.03□□□□□ -0.64
CDH13-204ENST00000539548 PARD6BQ9BYG5 372 aa11.03□□□□□ -0.64
CDH13-204ENST00000539548 ERICH4A6NGS2 130 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 SASH3O75995 380 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 GNAT2P19087 354 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 ZNF827Q17R98 1081 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 SPATA1Q5VX52 437 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 APTXQ7Z2E3 356 aaKnown RBP11.02□□□□□ -0.65
CDH13-204ENST00000539548 GRAMD1CQ8IYS0 662 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 FANCBQ8NB91 859 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 GOLGA1Q92805 767 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 CCDC34Q96HJ3 373 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 CSRNP2Q9H175 543 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 EPC1Q9H2F5 836 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 ARMT1Q9H993 441 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 ARFGAP3Q9NP61 516 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 SEC31BQ9NQW1 1179 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 STRN4Q9NRL3 753 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 AATFQ9NY61 560 aaKnown RBP eCLIP11.02□□□□□ -0.65
CDH13-204ENST00000539548 BCORQ6W2J9 1755 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 NUP98P52948 1817 aa11.02□□□□□ -0.65
CDH13-204ENST00000539548 ERICH2A1L162 156 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 TXLNAP40222 546 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 PBX1P40424 430 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 NR5A1Q13285 461 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 PPP2R5BQ15173 497 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 USP49Q70CQ1 688 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 SH3RF1Q7Z6J0 888 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 DHX58Q96C10 678 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 NACAP1Q9BZK3 213 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 MRPL44Q9H9J2 332 aaKnown RBP11.01□□□□□ -0.65
CDH13-204ENST00000539548 TRMT112Q9UI30 125 aaKnown RBP11.01□□□□□ -0.65
CDH13-204ENST00000539548 ASAP1Q9ULH1 1129 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 ADGRG1Q9Y653 693 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 PNPLA7Q6ZV29 1317 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 SEMA3EO15041 775 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 TEX33O43247 280 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 SLC5A1P13866 664 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 TUBB2AQ13885 445 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 BRD3Q15059 726 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 PPFIBP1Q86W92 1011 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 OXER1Q8TDS5 423 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 CCDC12Q8WUD4 166 aaPredicted RBP11.01□□□□□ -0.65
CDH13-204ENST00000539548 PIGBQ92521 554 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 DESI2Q9BSY9 194 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 TUBB2BQ9BVA1 445 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 FUT8Q9BYC5 575 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 CABP5Q9NP86 173 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 LRP5O75197 1615 aa11.01□□□□□ -0.65
CDH13-204ENST00000539548 POLR3GO15318 223 aaPredicted RBP11□□□□□ -0.65
CDH13-204ENST00000539548 TUBB4BP68371 445 aa11□□□□□ -0.65
CDH13-204ENST00000539548 RBL2Q08999 1139 aa11□□□□□ -0.65
CDH13-204ENST00000539548 CUL4BQ13620 913 aa11□□□□□ -0.65
CDH13-204ENST00000539548 SMC1AQ14683 1233 aaKnown RBP11□□□□□ -0.65
CDH13-204ENST00000539548 MTF1Q14872 753 aa11□□□□□ -0.65
CDH13-204ENST00000539548 KARSQ15046 597 aaKnown RBP11□□□□□ -0.65
CDH13-204ENST00000539548 RRP12Q5JTH9 1297 aaKnown RBP11□□□□□ -0.65
CDH13-204ENST00000539548 CDKAL1Q5VV42 579 aa11□□□□□ -0.65
CDH13-204ENST00000539548 SRGAP1Q7Z6B7 1085 aa11□□□□□ -0.65
CDH13-204ENST00000539548 ZNF654Q8IZM8 581 aa11□□□□□ -0.65
CDH13-204ENST00000539548 CTAGE1Q96RT6 745 aa11□□□□□ -0.65
CDH13-204ENST00000539548 ZKSCAN3Q9BRR0 538 aa11□□□□□ -0.65
CDH13-204ENST00000539548 RNF26Q9BY78 433 aaPredicted RBP11□□□□□ -0.65
CDH13-204ENST00000539548 RNF41Q9H4P4 317 aaPredicted RBP11□□□□□ -0.65
CDH13-204ENST00000539548 ADD3Q9UEY8 706 aaKnown RBP11□□□□□ -0.65
CDH13-204ENST00000539548 CCDC151A5D8V7 595 aa11□□□□□ -0.65
CDH13-204ENST00000539548 SOWAHDA6NJG2 315 aa11□□□□□ -0.65
CDH13-204ENST00000539548 TRIM75PA6NK02 468 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms