RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 HDAC9Q9UKV0 1011 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 MTMR6Q9Y217 621 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 GJA3Q9Y6H8 435 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 USP17L12C9JPN9 530 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 USP17L21D6R901 530 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 WDHD1O75717 1129 aaPredicted RBP10.34□□□□□ -0.75
DDB1-213ENST00000539332 GMPSP49915 693 aaPredicted RBP10.34□□□□□ -0.75
DDB1-213ENST00000539332 RCAN1P53805 252 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 ZNF445P59923 1031 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 HMGN5P82970 282 aaKnown RBP10.34□□□□□ -0.75
DDB1-213ENST00000539332 STK3Q13188 491 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 C9orf131Q5VYM1 1079 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 DPF2Q92785 391 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 USP40Q9NVE5 1235 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 FLT1P17948 1338 aa10.33□□□□□ -0.76
DDB1-213ENST00000539332 KLF18A0A0U1RQI7 1052 aa10.33□□□□□ -0.76
DDB1-213ENST00000539332 SPDYE2BA6NHP3 402 aa10.33□□□□□ -0.76
DDB1-213ENST00000539332 KDM4AO75164 1064 aa10.33□□□□□ -0.76
DDB1-213ENST00000539332 F13A1P00488 732 aa10.33□□□□□ -0.76
DDB1-213ENST00000539332 SPDYE6P0CI01 402 aa10.33□□□□□ -0.76
DDB1-213ENST00000539332 MMP14P50281 582 aa10.33□□□□□ -0.76
DDB1-213ENST00000539332 ZNF280AP59817 542 aaPredicted RBP10.33□□□□□ -0.76
DDB1-213ENST00000539332 DLGAP5Q15398 846 aa10.33□□□□□ -0.76
DDB1-213ENST00000539332 APOA5Q6Q788 366 aa10.33□□□□□ -0.76
DDB1-213ENST00000539332 MAPKAPK5Q8IW41 473 aa10.33□□□□□ -0.76
DDB1-213ENST00000539332 GPC2Q8N158 579 aa10.33□□□□□ -0.76
DDB1-213ENST00000539332 MTMR14Q8NCE2 650 aa10.33□□□□□ -0.76
DDB1-213ENST00000539332 PRMT6Q96LA8 375 aaPredicted RBP10.33□□□□□ -0.76
DDB1-213ENST00000539332 INCENPQ9NQS7 918 aa10.33□□□□□ -0.76
DDB1-213ENST00000539332 MCM9Q9NXL9 1143 aa10.33□□□□□ -0.76
DDB1-213ENST00000539332 CYP2D7A0A087X1C5 515 aa10.32□□□□□ -0.76
DDB1-213ENST00000539332 SHTN1A0MZ66 631 aa10.32□□□□□ -0.76
DDB1-213ENST00000539332 MINDY4BA8MYZ0 360 aa10.32□□□□□ -0.76
DDB1-213ENST00000539332 SMIM22K7EJ46 135 aa10.32□□□□□ -0.76
DDB1-213ENST00000539332 ZNF500O60304 480 aaPredicted RBP10.32□□□□□ -0.76
DDB1-213ENST00000539332 JAK2O60674 1132 aa10.32□□□□□ -0.76
DDB1-213ENST00000539332 SEC23AQ15436 765 aa10.32□□□□□ -0.76
DDB1-213ENST00000539332 C12orf60Q5U649 245 aa10.32□□□□□ -0.76
DDB1-213ENST00000539332 PTPDC1A2A3K4 754 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 GOLGA8BA8MQT2 603 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 CACNB3P54284 484 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 EVX2Q03828 476 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 NFIAQ12857 509 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 PICALMQ13492 652 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 TMEM67Q5HYA8 995 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 FOXD4L5Q5VV16 416 aaPredicted RBP10.31□□□□□ -0.76
DDB1-213ENST00000539332 MICALL2Q8IY33 904 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 FOXD4L4Q8WXT5 416 aaPredicted RBP10.31□□□□□ -0.76
DDB1-213ENST00000539332 ESR2Q92731 530 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 ZBED3Q96IU2 234 aaPredicted RBP10.31□□□□□ -0.76
DDB1-213ENST00000539332 IDI2Q9BXS1 227 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 TDRD3Q9H7E2 651 aaKnown RBP10.31□□□□□ -0.76
DDB1-213ENST00000539332 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 NCOA5Q9HCD5 579 aaKnown RBP10.31□□□□□ -0.76
DDB1-213ENST00000539332 MYOZ2Q9NPC6 264 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 DDX4Q9NQI0 724 aaKnown RBP10.31□□□□□ -0.76
DDB1-213ENST00000539332 LMBRD1Q9NUN5 540 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 SAP30BPQ9UHR5 308 aaKnown RBP10.31□□□□□ -0.76
DDB1-213ENST00000539332 CNOT7Q9UIV1 285 aaKnown RBP10.31□□□□□ -0.76
DDB1-213ENST00000539332 POLR2AP24928 1970 aaKnown RBP10.31□□□□□ -0.76
DDB1-213ENST00000539332 WNT10BO00744 389 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 DHX16O60231 1041 aaKnown RBP10.31□□□□□ -0.76
DDB1-213ENST00000539332 CYP2D6P10635 497 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 SART3Q15020 963 aaKnown RBP10.31□□□□□ -0.76
DDB1-213ENST00000539332 SLC4A8Q2Y0W8 1093 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 LARP1BQ659C4 914 aaKnown RBP10.31□□□□□ -0.76
DDB1-213ENST00000539332 GAS2L3Q86XJ1 694 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 TMTC2Q8N394 836 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 TMEM87AQ8NBN3 555 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 GPRC5DQ9NZD1 345 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 NOL7Q9UMY1 257 aaKnown RBP10.31□□□□□ -0.76
DDB1-213ENST00000539332 KIF3AQ9Y496 699 aa10.31□□□□□ -0.76
DDB1-213ENST00000539332 IFIT3O14879 490 aaKnown RBP10.3□□□□□ -0.76
DDB1-213ENST00000539332 DDNO94850 711 aaPredicted RBP10.3□□□□□ -0.76
DDB1-213ENST00000539332 EGFRP00533 1210 aa10.3□□□□□ -0.76
DDB1-213ENST00000539332 SLC3A2P08195 630 aaKnown RBP10.3□□□□□ -0.76
DDB1-213ENST00000539332 FDPSP14324 419 aaKnown RBP10.3□□□□□ -0.76
DDB1-213ENST00000539332 CCT2P78371 535 aaKnown RBP10.3□□□□□ -0.76
DDB1-213ENST00000539332 NBPF9Q3BBW0 867 aa10.3□□□□□ -0.76
DDB1-213ENST00000539332 SPDYE2Q495Y8 402 aa10.3□□□□□ -0.76
DDB1-213ENST00000539332 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.3□□□□□ -0.76
DDB1-213ENST00000539332 CDC37L1Q7L3B6 337 aa10.3□□□□□ -0.76
DDB1-213ENST00000539332 AMOTL1Q8IY63 956 aa10.3□□□□□ -0.76
DDB1-213ENST00000539332 FAM217BQ9NTX9 383 aaPredicted RBP10.3□□□□□ -0.76
DDB1-213ENST00000539332 FAM198AQ9UFP1 575 aa10.3□□□□□ -0.76
DDB1-213ENST00000539332 ATP6V1DQ9Y5K8 247 aa10.3□□□□□ -0.76
DDB1-213ENST00000539332 MYH4Q9Y623 1939 aa10.3□□□□□ -0.76
DDB1-213ENST00000539332 ZC3H4Q9UPT8 1303 aaKnown RBP10.3□□□□□ -0.76
DDB1-213ENST00000539332 CLRN2A0PK11 232 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 H7C1D1 291 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 ZBTB43O43298 467 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 POLR3DP05423 398 aaPredicted RBP10.29□□□□□ -0.76
DDB1-213ENST00000539332 PLCD1P51178 756 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 TCP10Q12799 353 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 WTAPQ15007 396 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 NTRK3Q16288 839 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 RRP12Q5JTH9 1297 aaKnown RBP10.29□□□□□ -0.76
DDB1-213ENST00000539332 RBM26Q5T8P6 1007 aaKnown RBP10.29□□□□□ -0.76
DDB1-213ENST00000539332 MCTP1Q6DN14 999 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 SAMD7Q7Z3H4 446 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms