RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 MYCP01106 439 aaPredicted RBP26.94■■□□□ 1.9
SCARB1-206ENST00000539320 EN2P19622 333 aaPredicted RBP26.94■■□□□ 1.9
SCARB1-206ENST00000539320 JAG1P78504 1218 aa26.94■■□□□ 1.9
SCARB1-206ENST00000539320 PRKCZQ05513 592 aa26.94■■□□□ 1.9
SCARB1-206ENST00000539320 MTMR2Q13614 643 aa26.94■■□□□ 1.9
SCARB1-206ENST00000539320 SHROOM1Q2M3G4 852 aaPredicted RBP26.94■■□□□ 1.9
SCARB1-206ENST00000539320 SLC9C2Q5TAH2 1124 aa26.94■■□□□ 1.9
SCARB1-206ENST00000539320 EHD4Q9H223 541 aa26.94■■□□□ 1.9
SCARB1-206ENST00000539320 MAGEB6P1A0A0J9YX57 407 aa26.93■■□□□ 1.9
SCARB1-206ENST00000539320 FAM110CQ1W6H9 321 aa26.93■■□□□ 1.9
SCARB1-206ENST00000539320 GRK4P32298 578 aa26.92■■□□□ 1.9
SCARB1-206ENST00000539320 BACE1P56817 501 aa26.92■■□□□ 1.9
SCARB1-206ENST00000539320 TTC6Q86TZ1 520 aa26.92■■□□□ 1.9
SCARB1-206ENST00000539320 ANKRD13CQ8N6S4 541 aa26.92■■□□□ 1.9
SCARB1-206ENST00000539320 EDC3Q96F86 508 aaKnown RBP26.92■■□□□ 1.9
SCARB1-206ENST00000539320 TMOD4Q9NZQ9 345 aa26.92■■□□□ 1.9
SCARB1-206ENST00000539320 SERPINB13Q9UIV8 391 aa26.92■■□□□ 1.9
SCARB1-206ENST00000539320 ZNF532Q9HCE3 1301 aa26.91■■□□□ 1.9
SCARB1-206ENST00000539320 TNPO2O14787 897 aaKnown RBP26.91■■□□□ 1.9
SCARB1-206ENST00000539320 GCLCP48506 637 aaPredicted RBP26.91■■□□□ 1.9
SCARB1-206ENST00000539320 CRNKL1Q9BZJ0 848 aaKnown RBP26.91■■□□□ 1.9
SCARB1-206ENST00000539320 LRRCC1Q9C099 1032 aa26.91■■□□□ 1.9
SCARB1-206ENST00000539320 ASCC2Q9H1I8 757 aaPredicted RBP26.91■■□□□ 1.9
SCARB1-206ENST00000539320 BOLA2Q9H3K6 86 aa26.91■■□□□ 1.9
SCARB1-206ENST00000539320 PAG1Q9NWQ8 432 aa26.91■■□□□ 1.9
SCARB1-206ENST00000539320 ATP5JP18859 108 aa26.9■■□□□ 1.9
SCARB1-206ENST00000539320 MKI67P46013 3256 aaKnown RBP26.89■■□□□ 1.9
SCARB1-206ENST00000539320 TCRBV5S4A2TA0A5A2 114 aa26.89■■□□□ 1.9
SCARB1-206ENST00000539320 C19orf81C9J6K1 198 aa26.89■■□□□ 1.9
SCARB1-206ENST00000539320 GH2P01242 217 aa26.89■■□□□ 1.9
SCARB1-206ENST00000539320 IRX3P78415 501 aaPredicted RBP26.89■■□□□ 1.9
SCARB1-206ENST00000539320 TATDN1Q6P1N9 297 aa26.89■■□□□ 1.9
SCARB1-206ENST00000539320 SLAIN1Q8ND83 568 aa26.89■■□□□ 1.9
SCARB1-206ENST00000539320 GABRQQ9UN88 632 aa26.89■■□□□ 1.9
SCARB1-206ENST00000539320 USP17L10C9JJH3 530 aa26.88■■□□□ 1.89
SCARB1-206ENST00000539320 MTFR1Q15390 333 aa26.88■■□□□ 1.89
SCARB1-206ENST00000539320 HAUS7Q99871 368 aa26.88■■□□□ 1.89
SCARB1-206ENST00000539320 POLR3DP05423 398 aaPredicted RBP26.87■■□□□ 1.89
SCARB1-206ENST00000539320 FLT3LGP49771 235 aa26.87■■□□□ 1.89
SCARB1-206ENST00000539320 LCORLQ8N3X6 602 aa26.87■■□□□ 1.89
SCARB1-206ENST00000539320 SMARCA5O60264 1052 aaPredicted RBP26.86■■□□□ 1.89
SCARB1-206ENST00000539320 ADD2P35612 726 aa26.86■■□□□ 1.89
SCARB1-206ENST00000539320 UBXN2AP68543 259 aa26.86■■□□□ 1.89
SCARB1-206ENST00000539320 DOCK3Q8IZD9 2030 aa26.86■■□□□ 1.89
SCARB1-206ENST00000539320 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.86■■□□□ 1.895e-8■■■■■ 28.3
SCARB1-206ENST00000539320 BIN2Q9UBW5 565 aaPredicted RBP26.86■■□□□ 1.89
SCARB1-206ENST00000539320 HOXA7P31268 230 aaPredicted RBP26.85■■□□□ 1.89
SCARB1-206ENST00000539320 PLCD1P51178 756 aa26.85■■□□□ 1.89
SCARB1-206ENST00000539320 COA7Q96BR5 231 aa26.85■■□□□ 1.89
SCARB1-206ENST00000539320 MCM9Q9NXL9 1143 aa26.85■■□□□ 1.89
SCARB1-206ENST00000539320 MYH7P12883 1935 aa26.84■■□□□ 1.89
SCARB1-206ENST00000539320 ADCY3O60266 1144 aa26.84■■□□□ 1.89
SCARB1-206ENST00000539320 SHMT1P34896 483 aa26.84■■□□□ 1.89
SCARB1-206ENST00000539320 IRF5Q13568 498 aa26.84■■□□□ 1.89
SCARB1-206ENST00000539320 CERKLQ49MI3 558 aaPredicted RBP26.84■■□□□ 1.89
SCARB1-206ENST00000539320 SDR42E1Q8WUS8 393 aa26.84■■□□□ 1.89
SCARB1-206ENST00000539320 FEZ1Q99689 392 aa26.84■■□□□ 1.89
SCARB1-206ENST00000539320 MORF4L1Q9UBU8 362 aa26.84■■□□□ 1.89
SCARB1-206ENST00000539320 MBD4O95243 580 aa26.83■■□□□ 1.89
SCARB1-206ENST00000539320 GABPAQ06546 454 aa26.83■■□□□ 1.89
SCARB1-206ENST00000539320 ABCB5Q2M3G0 1257 aa26.83■■□□□ 1.89
SCARB1-206ENST00000539320 USP17L2Q6R6M4 530 aa26.83■■□□□ 1.89
SCARB1-206ENST00000539320 ARMT1Q9H993 441 aa26.83■■□□□ 1.89
SCARB1-206ENST00000539320 DCP1AQ9NPI6 582 aaPredicted RBP26.83■■□□□ 1.89
SCARB1-206ENST00000539320 CCL5P13501 91 aa26.82■■□□□ 1.88
SCARB1-206ENST00000539320 RAB3GAP1Q15042 981 aa26.82■■□□□ 1.88
SCARB1-206ENST00000539320 SHISA4Q96DD7 197 aa26.82■■□□□ 1.88
SCARB1-206ENST00000539320 CABP5Q9NP86 173 aa26.82■■□□□ 1.88
SCARB1-206ENST00000539320 EMILIN3Q9NT22 766 aa26.82■■□□□ 1.88
SCARB1-206ENST00000539320 ELNP15502 786 aa26.81■■□□□ 1.88
SCARB1-206ENST00000539320 HERVK_113P62684 666 aa26.81■■□□□ 1.88
SCARB1-206ENST00000539320 SLFNL1Q499Z3 407 aa26.81■■□□□ 1.88
SCARB1-206ENST00000539320 NKX2-3Q8TAU0 364 aa26.81■■□□□ 1.88
SCARB1-206ENST00000539320 PXYLP1Q8TE99 480 aa26.81■■□□□ 1.88
SCARB1-206ENST00000539320 C12orf42Q96LP6 360 aa26.81■■□□□ 1.88
SCARB1-206ENST00000539320 P2RX7Q99572 595 aaKnown RBP26.81■■□□□ 1.88
SCARB1-206ENST00000539320 DCTPP1Q9H773 170 aa26.81■■□□□ 1.88
SCARB1-206ENST00000539320 TAOK2Q9UL54 1235 aa26.81■■□□□ 1.88
SCARB1-206ENST00000539320 EVX2Q03828 476 aa26.8■■□□□ 1.88
SCARB1-206ENST00000539320 UBE3CQ15386 1083 aa26.8■■□□□ 1.88
SCARB1-206ENST00000539320 ZYXQ15942 572 aaKnown RBP26.8■■□□□ 1.88
SCARB1-206ENST00000539320 GTF3C2Q8WUA4 911 aaPredicted RBP26.8■■□□□ 1.88
SCARB1-206ENST00000539320 RNF208Q9H0X6 261 aa26.8■■□□□ 1.88
SCARB1-206ENST00000539320 ECHDC1Q9NTX5 307 aa26.8■■□□□ 1.88
SCARB1-206ENST00000539320 INHAP05111 366 aa26.79■■□□□ 1.88
SCARB1-206ENST00000539320 GJB1P08034 283 aa26.79■■□□□ 1.88
SCARB1-206ENST00000539320 USP14P54578 494 aa26.79■■□□□ 1.88
SCARB1-206ENST00000539320 PRKAB2O43741 272 aa26.78■■□□□ 1.88
SCARB1-206ENST00000539320 CYP2D6P10635 497 aa26.78■■□□□ 1.88
SCARB1-206ENST00000539320 ZSCAN25Q6NSZ9 544 aa26.78■■□□□ 1.88
SCARB1-206ENST00000539320 GPATCH3Q96I76 525 aa26.78■■□□□ 1.88
SCARB1-206ENST00000539320 KIAA1683Q9H0B3 1180 aa26.78■■□□□ 1.88
SCARB1-206ENST00000539320 UNC93B1Q9H1C4 597 aa26.78■■□□□ 1.88
SCARB1-206ENST00000539320 TXNRD2Q9NNW7 524 aa26.78■■□□□ 1.88
SCARB1-206ENST00000539320 ATP8A2Q9NTI2 1148 aa26.78■■□□□ 1.88
SCARB1-206ENST00000539320 CHGBP05060 677 aa26.77■■□□□ 1.88
SCARB1-206ENST00000539320 GJA8P48165 433 aa26.77■■□□□ 1.88
SCARB1-206ENST00000539320 ACER1Q8TDN7 264 aa26.77■■□□□ 1.88
SCARB1-206ENST00000539320 SWAP70Q9UH65 585 aa26.77■■□□□ 1.88
SCARB1-206ENST00000539320 BAZ2AQ9UIF9 1905 aaKnown RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms