RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 MPHOSPH10O00566 681 aaKnown RBP12.04□□□□□ -0.48
CLPB-210ENST00000539148 MCM2P49736 904 aa12.04□□□□□ -0.48
CLPB-210ENST00000539148 GABPAQ06546 454 aa12.04□□□□□ -0.48
CLPB-210ENST00000539148 ABCB5Q2M3G0 1257 aa12.04□□□□□ -0.48
CLPB-210ENST00000539148 NBPF12Q5TAG4 269 aaPredicted RBP12.04□□□□□ -0.48
CLPB-210ENST00000539148 MAP1SQ66K74 1059 aaPredicted RBP12.04□□□□□ -0.48
CLPB-210ENST00000539148 TATDN1Q6P1N9 297 aa12.04□□□□□ -0.48
CLPB-210ENST00000539148 TMEM179Q6ZVK1 233 aa12.04□□□□□ -0.48
CLPB-210ENST00000539148 DHX32Q7L7V1 743 aaKnown RBP12.04□□□□□ -0.48
CLPB-210ENST00000539148 ZFPM1Q8IX07 1006 aa12.04□□□□□ -0.48
CLPB-210ENST00000539148 IL17RAQ96F46 866 aa12.04□□□□□ -0.48
CLPB-210ENST00000539148 TTC14Q96N46 770 aa12.04□□□□□ -0.48
CLPB-210ENST00000539148 GLIS2Q9BZE0 524 aaPredicted RBP12.04□□□□□ -0.48
CLPB-210ENST00000539148 AS3MTQ9HBK9 375 aa12.04□□□□□ -0.48
CLPB-210ENST00000539148 PICK1Q9NRD5 415 aa12.04□□□□□ -0.48
CLPB-210ENST00000539148 PAPPA2Q9BXP8 1791 aa12.04□□□□□ -0.48
CLPB-210ENST00000539148 SIPA1L1O43166 1804 aa12.04□□□□□ -0.48
CLPB-210ENST00000539148 MYH4Q9Y623 1939 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 CYP2D7A0A087X1C5 515 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 ADM5C9JUS6 153 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 KIF3CO14782 793 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 KDM4AO75164 1064 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 CYP2D6P10635 497 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 CASTP20810 708 aaKnown RBP12.03□□□□□ -0.48
CLPB-210ENST00000539148 TFAP4Q01664 338 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 SLC4A8Q2Y0W8 1093 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 SYNE3Q6ZMZ3 975 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 RUFY3Q7L099 469 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 SH3BP5LQ7L8J4 393 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 ANKRD13AQ8IZ07 590 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 KANSL2Q9H9L4 492 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 TCP11L1Q9NUJ3 509 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 SYNPO2Q9UMS6 1093 aa12.03□□□□□ -0.48
CLPB-210ENST00000539148 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLPB-210ENST00000539148 RASA1P20936 1047 aa12.02□□□□□ -0.49
CLPB-210ENST00000539148 CAP2P40123 477 aa12.02□□□□□ -0.49
CLPB-210ENST00000539148 MAP3K9P80192 1104 aa12.02□□□□□ -0.49
CLPB-210ENST00000539148 MIGA2Q7L4E1 593 aa12.02□□□□□ -0.49
CLPB-210ENST00000539148 DGKHQ86XP1 1220 aa12.02□□□□□ -0.49
CLPB-210ENST00000539148 TBC1D10CQ8IV04 446 aa12.02□□□□□ -0.49
CLPB-210ENST00000539148 HSCBQ8IWL3 235 aa12.02□□□□□ -0.49
CLPB-210ENST00000539148 NEDD1Q8NHV4 660 aa12.02□□□□□ -0.49
CLPB-210ENST00000539148 DYNLL2Q96FJ2 89 aa12.02□□□□□ -0.49
CLPB-210ENST00000539148 WRNIP1Q96S55 665 aa12.02□□□□□ -0.49
CLPB-210ENST00000539148 ARHGEF10LQ9HCE6 1279 aa12.02□□□□□ -0.49
CLPB-210ENST00000539148 ZSWIM6Q9HCJ5 1215 aa12.02□□□□□ -0.49
CLPB-210ENST00000539148 B4E1Z4 1266 aa12.01□□□□□ -0.49
CLPB-210ENST00000539148 IFIT3O14879 490 aaKnown RBP12.01□□□□□ -0.49
CLPB-210ENST00000539148 PRC1O43663 620 aa12.01□□□□□ -0.49
CLPB-210ENST00000539148 RPS6KB1P23443 525 aa12.01□□□□□ -0.49
CLPB-210ENST00000539148 SHMT1P34896 483 aa12.01□□□□□ -0.49
CLPB-210ENST00000539148 NEK4P51957 841 aa12.01□□□□□ -0.49
CLPB-210ENST00000539148 MAP3K11Q16584 847 aa12.01□□□□□ -0.49
CLPB-210ENST00000539148 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
CLPB-210ENST00000539148 SCYL3Q8IZE3 742 aa12.01□□□□□ -0.49
CLPB-210ENST00000539148 STK11IPQ8N1F8 1099 aa12.01□□□□□ -0.49
CLPB-210ENST00000539148 KLRG1Q96E93 195 aa12.01□□□□□ -0.49
CLPB-210ENST00000539148 ZSCAN10Q96SZ4 725 aaPredicted RBP12.01□□□□□ -0.49
CLPB-210ENST00000539148 ZNF408Q9H9D4 720 aa12.01□□□□□ -0.49
CLPB-210ENST00000539148 GBA2Q9HCG7 927 aaPredicted RBP12.01□□□□□ -0.49
CLPB-210ENST00000539148 ZSWIM5Q9P217 1185 aa12.01□□□□□ -0.49
CLPB-210ENST00000539148 ZNF112Q9UJU3 913 aa12.01□□□□□ -0.49
CLPB-210ENST00000539148 ANGEL1Q9UNK9 670 aaKnown RBP12.01□□□□□ -0.49
CLPB-210ENST00000539148 PLIN4Q96Q06 1357 aa12.01□□□□□ -0.49
CLPB-210ENST00000539148 GREB1LQ9C091 1923 aaPredicted RBP12□□□□□ -0.49
CLPB-210ENST00000539148 CCDC69A6NI79 296 aa12□□□□□ -0.49
CLPB-210ENST00000539148 USP17L5A8MUK1 530 aa12□□□□□ -0.49
CLPB-210ENST00000539148 PRDM1O75626 825 aa12□□□□□ -0.49
CLPB-210ENST00000539148 CELF2O95319 508 aaKnown RBP12□□□□□ -0.49
CLPB-210ENST00000539148 TTLL1O95922 423 aa12□□□□□ -0.49
CLPB-210ENST00000539148 CALM1P0DP23 149 aa12□□□□□ -0.49
CLPB-210ENST00000539148 CALM2P0DP24 149 aa12□□□□□ -0.49
CLPB-210ENST00000539148 CALM3P0DP25 149 aa12□□□□□ -0.49
CLPB-210ENST00000539148 WTAPQ15007 396 aa12□□□□□ -0.49
CLPB-210ENST00000539148 PPP2R5BQ15173 497 aa12□□□□□ -0.49
CLPB-210ENST00000539148 TMEM67Q5HYA8 995 aa12□□□□□ -0.49
CLPB-210ENST00000539148 NOL9Q5SY16 702 aaKnown RBP12□□□□□ -0.49
CLPB-210ENST00000539148 IFIT1BQ5T764 474 aaKnown RBP12□□□□□ -0.49
CLPB-210ENST00000539148 NFXL1Q6ZNB6 911 aa12□□□□□ -0.49
CLPB-210ENST00000539148 MB21D2Q8IYB1 491 aaPredicted RBP12□□□□□ -0.49
CLPB-210ENST00000539148 FBXL16Q8N461 479 aa12□□□□□ -0.49
CLPB-210ENST00000539148 NBPF3Q9H094 633 aa12□□□□□ -0.49
CLPB-210ENST00000539148 ALDH8A1Q9H2A2 487 aaPredicted RBP12□□□□□ -0.49
CLPB-210ENST00000539148 KAT14Q9H8E8 782 aa12□□□□□ -0.49
CLPB-210ENST00000539148 PDRG1Q9NUG6 133 aa12□□□□□ -0.49
CLPB-210ENST00000539148 NEDD4P46934 1319 aa12□□□□□ -0.49
CLPB-210ENST00000539148 USP2O75604 605 aaPredicted RBP11.99□□□□□ -0.49
CLPB-210ENST00000539148 ITGBL1O95965 494 aaPredicted RBP11.99□□□□□ -0.49
CLPB-210ENST00000539148 POTEIP0CG38 1075 aa11.99□□□□□ -0.49
CLPB-210ENST00000539148 POTEJP0CG39 1038 aa11.99□□□□□ -0.49
CLPB-210ENST00000539148 LIFRP42702 1097 aa11.99□□□□□ -0.49
CLPB-210ENST00000539148 ICA1Q05084 483 aa11.99□□□□□ -0.49
CLPB-210ENST00000539148 RAB3GAP1Q15042 981 aa11.99□□□□□ -0.49
CLPB-210ENST00000539148 PRAMEF18Q5VWM3 479 aa11.99□□□□□ -0.49
CLPB-210ENST00000539148 SLC44A5Q8NCS7 719 aa11.99□□□□□ -0.49
CLPB-210ENST00000539148 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLPB-210ENST00000539148 NYAP2Q9P242 653 aa11.99□□□□□ -0.49
CLPB-210ENST00000539148 ZBTB21Q9ULJ3 1066 aa11.99□□□□□ -0.49
CLPB-210ENST00000539148 CIZ1Q9ULV3 898 aaPredicted RBP11.99□□□□□ -0.49
CLPB-210ENST00000539148 STX8Q9UNK0 236 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms