RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 TSKSQ9UJT2 592 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 SSX2IPQ9Y2D8 614 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 PHLPP2Q6ZVD8 1323 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 KRIT1O00522 736 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 CNGA1P29973 690 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 DRC3Q9H069 523 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 MAPK8IP1Q9UQF2 711 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 BEND3Q5T5X7 828 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 AEBP2Q6ZN18 517 aaPredicted RBP6.27□□□□□ -1.41
CSMD1-215ENST00000537824 FNBP4Q8N3X1 1017 aaPredicted RBP6.27□□□□□ -1.41
CSMD1-215ENST00000537824 OSBPL1AQ9BXW6 950 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 PAIP2BQ9ULR5 123 aaKnown RBP6.27□□□□□ -1.41
CSMD1-215ENST00000537824 CADPSQ9ULU8 1353 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 VWA3BQ502W6 1294 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 PPP4R3AQ6IN85 833 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 AFAP1L2Q8N4X5 818 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 EIF2AK4Q9P2K8 1649 aaKnown RBP6.27□□□□□ -1.41
CSMD1-215ENST00000537824 EIF4E1BA6NMX2 242 aaKnown RBP6.27□□□□□ -1.41
CSMD1-215ENST00000537824 MAK16Q9BXY0 300 aaKnown RBP6.27□□□□□ -1.41
CSMD1-215ENST00000537824 RAB17Q9H0T7 212 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 GUCY2DQ02846 1103 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 HEATR3Q7Z4Q2 680 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 NUP205Q92621 2012 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 CHAMP1Q96JM3 812 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 EFCAB5A4FU69 1503 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 SLMAPQ14BN4 828 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 KIAA2013Q8IYS2 634 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 ANKRD44Q8N8A2 993 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 NELFBQ8WX92 580 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 VAT1LQ9HCJ6 419 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 CTTNBP2NLQ9P2B4 639 aa6.27□□□□□ -1.41
CSMD1-215ENST00000537824 SART1O43290 800 aaKnown RBP6.26□□□□□ -1.41
CSMD1-215ENST00000537824 MAN1A2O60476 641 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 PPP4R1Q8TF05 950 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 MAP7D3Q8IWC1 876 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 PRAM1Q96QH2 718 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 CDC25BP30305 580 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 CHST3Q7LGC8 479 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 C2CD5Q86YS7 1000 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 CSRNP2Q9H175 543 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 ADAM21Q9UKJ8 722 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 ITSN2Q9NZM3 1697 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 CCDC88AQ3V6T2 1871 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 KDM2BQ8NHM5 1336 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 GJC2Q5T442 439 aaPredicted RBP6.26□□□□□ -1.41
CSMD1-215ENST00000537824 NBPF14Q5TI25 921 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 PARP9Q8IXQ6 854 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 TRMT44Q8IYL2 757 aaKnown RBP6.26□□□□□ -1.41
CSMD1-215ENST00000537824 ABTB2Q8N961 1025 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 NAIPQ13075 1403 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 SFMBT2Q5VUG0 894 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 HIBCHQ6NVY1 386 aaPredicted RBP6.26□□□□□ -1.41
CSMD1-215ENST00000537824 SCYL3Q8IZE3 742 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 MYD88Q99836 296 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 CUTAO60888 179 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 TRAF5O00463 557 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 DTNBO60941 627 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 HVCN1Q96D96 273 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 ST7Q9NRC1 585 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 TNNQ9UQP3 1299 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 ZNF638Q14966 1978 aaKnown RBP6.26□□□□□ -1.41
CSMD1-215ENST00000537824 KRT2P35908 639 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 MRPS9P82933 396 aaKnown RBP6.26□□□□□ -1.41
CSMD1-215ENST00000537824 CUL3Q13618 768 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 RCN2Q14257 317 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 CCDC93Q567U6 631 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 FAM173BQ6P4H8 233 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 IQUBQ8NA54 791 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 UHMK1Q8TAS1 419 aaKnown RBP6.26□□□□□ -1.41
CSMD1-215ENST00000537824 CABP1Q9NZU7 370 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 CDC23Q9UJX2 597 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 DOCK10Q96BY6 2186 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 ATP8B1O43520 1251 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 CHMLP26374 656 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 PSMD7P51665 324 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 CDC37L1Q7L3B6 337 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 ARMCX6Q7L4S7 300 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 CACTINQ8WUQ7 758 aaKnown RBP6.26□□□□□ -1.41
CSMD1-215ENST00000537824 PRPF31Q8WWY3 499 aaKnown RBP6.26□□□□□ -1.41
CSMD1-215ENST00000537824 NOC4LQ9BVI4 516 aaKnown RBP6.26□□□□□ -1.41
CSMD1-215ENST00000537824 SPZ1Q9BXG8 430 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 VWA3AA6NCI4 1184 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 PABPN1LA6NDY0 278 aaKnown RBP6.26□□□□□ -1.41
CSMD1-215ENST00000537824 NDC80O14777 642 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 CHMP2AO43633 222 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 ZPR1O75312 459 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 MAP3K7CLP57077 242 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 MAP3K12Q12852 859 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 ZNF513Q8N8E2 541 aaPredicted RBP6.26□□□□□ -1.41
CSMD1-215ENST00000537824 NLRP7Q8WX94 980 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 PARD6BQ9BYG5 372 aa6.26□□□□□ -1.41
CSMD1-215ENST00000537824 RALGAPBQ86X10 1494 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 SCN1AP35498 2009 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 CUL5Q93034 780 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 CD2APQ9Y5K6 639 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 DYTNA2CJ06 578 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 FAM13AO94988 1023 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 GOLGA8FQ08AF8 430 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 GOLGA8DPQ0D2H9 430 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 SRGAP1Q7Z6B7 1085 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms