RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 AKR1B15C9JRZ8 316 aaPredicted RBP13.86□□□□□ -0.19
CPSF7-218ENST00000537641 IRS4O14654 1257 aaPredicted RBP13.86□□□□□ -0.19
CPSF7-218ENST00000537641 PDE8AO60658 829 aa13.86□□□□□ -0.19
CPSF7-218ENST00000537641 FMR1Q06787 632 aaKnown RBP eCLIP13.86□□□□□ -0.19
CPSF7-218ENST00000537641 METTL24Q5JXM2 366 aa13.86□□□□□ -0.19
CPSF7-218ENST00000537641 LDHAL6AQ6ZMR3 332 aa13.86□□□□□ -0.19
CPSF7-218ENST00000537641 SYNE4Q8N205 404 aa13.86□□□□□ -0.19
CPSF7-218ENST00000537641 HNRNPLLQ8WVV9 542 aaKnown RBP13.86□□□□□ -0.19
CPSF7-218ENST00000537641 DHX58Q96C10 678 aa13.86□□□□□ -0.19
CPSF7-218ENST00000537641 PARD6BQ9BYG5 372 aa13.86□□□□□ -0.19
CPSF7-218ENST00000537641 GREM2Q9H772 168 aa13.86□□□□□ -0.19
CPSF7-218ENST00000537641 CNNM2Q9H8M5 875 aa13.86□□□□□ -0.19
CPSF7-218ENST00000537641 SERTAD1Q9UHV2 236 aa13.86□□□□□ -0.19
CPSF7-218ENST00000537641 TRMT112Q9UI30 125 aaKnown RBP13.86□□□□□ -0.19
CPSF7-218ENST00000537641 SEMA3EO15041 775 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 POLR3GO15318 223 aaPredicted RBP13.85□□□□□ -0.19
CPSF7-218ENST00000537641 FOXN1O15353 648 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 UQCRFS1P1P0C7P4 283 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 PRR29P0C7W0 189 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 RXRAP19793 462 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 RCAN1P53805 252 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 SLC9C2Q5TAH2 1124 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 SRGAP1Q7Z6B7 1085 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 ZNF34Q8IZ26 560 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 FAM177A1Q8N128 213 aaPredicted RBP13.85□□□□□ -0.19
CPSF7-218ENST00000537641 SPATA20Q8TB22 786 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 CCDC12Q8WUD4 166 aaPredicted RBP13.85□□□□□ -0.19
CPSF7-218ENST00000537641 EXOC4Q96A65 974 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 AK7Q96M32 723 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 SLC26A6Q9BXS9 759 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 FUT8Q9BYC5 575 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 TMEM51Q9NW97 253 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 SRPRBQ9Y5M8 271 aaKnown RBP13.85□□□□□ -0.19
CPSF7-218ENST00000537641 SLC12A7Q9Y666 1083 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 SPATA31A1Q5TZJ5 1347 aa13.85□□□□□ -0.19
CPSF7-218ENST00000537641 MAP2K7O14733 419 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 ACTN4O43707 911 aaKnown RBP13.84□□□□□ -0.19
CPSF7-218ENST00000537641 ARID4AP29374 1257 aaPredicted RBP13.84□□□□□ -0.19
CPSF7-218ENST00000537641 ADKP55263 362 aaKnown RBP13.84□□□□□ -0.19
CPSF7-218ENST00000537641 DIS3L2Q8IYB7 885 aaKnown RBP13.84□□□□□ -0.19
CPSF7-218ENST00000537641 TRIM22Q8IYM9 498 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 VGLL2Q8N8G2 317 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 CCDC51Q96ER9 411 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 KRT23Q9C075 422 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 CNNM1Q9NRU3 951 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 DENND2AQ9ULE3 1009 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 BCORQ6W2J9 1755 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 ZNF532Q9HCE3 1301 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 MYH6P13533 1939 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 LTBP4Q8N2S1 1624 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 POLR2DO15514 142 aaKnown RBP13.84□□□□□ -0.19
CPSF7-218ENST00000537641 PDE6AP16499 860 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 FECHP22830 423 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 TOB1P50616 345 aaPredicted RBP13.84□□□□□ -0.19
CPSF7-218ENST00000537641 LONRF2Q1L5Z9 754 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 PI16Q6UXB8 463 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 MSANTD4Q8NCY6 345 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 CTAGE1Q96RT6 745 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 SENP2Q9HC62 589 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 PIH1D3Q9NQM4 214 aaKnown RBP13.84□□□□□ -0.19
CPSF7-218ENST00000537641 CDC23Q9UJX2 597 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 RAB21Q9UL25 225 aa13.84□□□□□ -0.19
CPSF7-218ENST00000537641 BCL9LQ86UU0 1499 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 SLIT2O94813 1529 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 TCRBV5S4A2TA0A5A2 114 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 IFIT3O14879 490 aaKnown RBP13.83□□□□□ -0.2
CPSF7-218ENST00000537641 KIF5CO60282 957 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 DEXIO95424 95 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 APPP05067 770 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 PBX1P40424 430 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 USP5P45974 858 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 EIF5P55010 431 aaKnown RBP13.83□□□□□ -0.2
CPSF7-218ENST00000537641 CHMP4BP1P59074 171 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 KARSQ15046 597 aaKnown RBP13.83□□□□□ -0.2
CPSF7-218ENST00000537641 DDB1Q16531 1140 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 SPATA1Q5VX52 437 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 PPFIBP1Q86W92 1011 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 NKX2-3Q8TAU0 364 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 STRBPQ96SI9 672 aaKnown RBP13.83□□□□□ -0.2
CPSF7-218ENST00000537641 MRPL44Q9H9J2 332 aaKnown RBP13.83□□□□□ -0.2
CPSF7-218ENST00000537641 CWC15Q9P013 229 aaKnown RBP13.83□□□□□ -0.2
CPSF7-218ENST00000537641 ADGRG1Q9Y653 693 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 ITIH6Q6UXX5 1313 aa13.83□□□□□ -0.2
CPSF7-218ENST00000537641 ZNF831Q5JPB2 1677 aa13.82□□□□□ -0.2
CPSF7-218ENST00000537641 BTBD18B2RXH4 712 aa13.82□□□□□ -0.2
CPSF7-218ENST00000537641 PATL2C9JE40 543 aaKnown RBP13.82□□□□□ -0.2
CPSF7-218ENST00000537641 ERLIN1O75477 346 aa13.82□□□□□ -0.2
CPSF7-218ENST00000537641 PDE8BO95263 885 aa13.82□□□□□ -0.2
CPSF7-218ENST00000537641 TUBBP07437 444 aa13.82□□□□□ -0.2
CPSF7-218ENST00000537641 COL5A3P25940 1745 aaPredicted RBP13.82□□□□□ -0.2
CPSF7-218ENST00000537641 RTN1Q16799 776 aa13.82□□□□□ -0.2
CPSF7-218ENST00000537641 PTPN21Q16825 1174 aa13.82□□□□□ -0.2
CPSF7-218ENST00000537641 FILIP1LQ4L180 1135 aa13.82□□□□□ -0.2
CPSF7-218ENST00000537641 APTXQ7Z2E3 356 aaKnown RBP13.82□□□□□ -0.2
CPSF7-218ENST00000537641 TRMT44Q8IYL2 757 aaKnown RBP13.82□□□□□ -0.2
CPSF7-218ENST00000537641 NEK11Q8NG66 645 aa13.82□□□□□ -0.2
CPSF7-218ENST00000537641 AIDAQ96BJ3 306 aa13.82□□□□□ -0.2
CPSF7-218ENST00000537641 EPC1Q9H2F5 836 aa13.82□□□□□ -0.2
CPSF7-218ENST00000537641 CCDC87Q9NVE4 849 aa13.82□□□□□ -0.2
CPSF7-218ENST00000537641 AATFQ9NY61 560 aaKnown RBP eCLIP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms