RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 EXOSC10Q01780 885 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 DNM1Q05193 864 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 TCP10Q12799 353 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 TNIP1Q15025 636 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 C12orf60Q5U649 245 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 MFSD6Q6ZSS7 791 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 DHX32Q7L7V1 743 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 CERS3Q8IU89 383 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 OGFOD1Q8N543 542 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 FUCA2Q9BTY2 467 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 SCAF8Q9UPN6 1271 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 ZKSCAN5Q9Y2L8 839 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 GPR162Q16538 588 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 SBK1Q52WX2 424 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 MICALL2Q8IY33 904 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 BRF1Q92994 677 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 ZKSCAN3Q9BRR0 538 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 FAM198AQ9UFP1 575 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 FIBPO43427 364 aa15.1■□□□□ 0.01
CDK5RAP3-202ENST00000536708 POLR3DP05423 398 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-202ENST00000536708 RNF214Q8ND24 703 aa15.1■□□□□ 0.01
CDK5RAP3-202ENST00000536708 MRIQ9BWK5 157 aa15.1■□□□□ 0.01
CDK5RAP3-202ENST00000536708 OSBPL5Q9H0X9 879 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-202ENST00000536708 PDCL3Q9H2J4 239 aa15.1■□□□□ 0.01
CDK5RAP3-202ENST00000536708 SENP2Q9HC62 589 aa15.1■□□□□ 0.01
CDK5RAP3-202ENST00000536708 HDAC9Q9UKV0 1011 aa15.1■□□□□ 0.01
CDK5RAP3-202ENST00000536708 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.1■□□□□ 0.01
CDK5RAP3-202ENST00000536708 ASTN2O75129 1339 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-202ENST00000536708 HMGB1P09429 215 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-202ENST00000536708 KRT85P78386 507 aa15.09■□□□□ 0.01
CDK5RAP3-202ENST00000536708 TRDNQ13061 729 aa15.09■□□□□ 0.01
CDK5RAP3-202ENST00000536708 DLGAP5Q15398 846 aa15.09■□□□□ 0.01
CDK5RAP3-202ENST00000536708 NBPF9Q3BBW0 867 aa15.09■□□□□ 0.01
CDK5RAP3-202ENST00000536708 C9orf131Q5VYM1 1079 aa15.09■□□□□ 0.01
CDK5RAP3-202ENST00000536708 ZMYND15Q9H091 742 aa15.09■□□□□ 0.01
CDK5RAP3-202ENST00000536708 MYOZ2Q9NPC6 264 aa15.09■□□□□ 0.01
CDK5RAP3-202ENST00000536708 VPS37CA5D8V6 355 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-202ENST00000536708 FGD1P98174 961 aa15.09■□□□□ 0.01
CDK5RAP3-202ENST00000536708 APOBRQ0VD83 1088 aa15.09■□□□□ 0.01
CDK5RAP3-202ENST00000536708 RBM26Q5T8P6 1007 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-202ENST00000536708 SAMD7Q7Z3H4 446 aa15.09■□□□□ 0.01
CDK5RAP3-202ENST00000536708 ZSWIM5Q9P217 1185 aa15.09■□□□□ 0.01
CDK5RAP3-202ENST00000536708 POLR2AP24928 1970 aaKnown RBP15.08■□□□□ 0.01
CDK5RAP3-202ENST00000536708 FAM196BA6NMK8 535 aa15.08■□□□□ 0
CDK5RAP3-202ENST00000536708 WNT10BO00744 389 aa15.08■□□□□ 0
CDK5RAP3-202ENST00000536708 STK3Q13188 491 aa15.08■□□□□ 0
CDK5RAP3-202ENST00000536708 TBC1D10BQ4KMP7 808 aaPredicted RBP15.08■□□□□ 0
CDK5RAP3-202ENST00000536708 SH3BP5LQ7L8J4 393 aa15.08■□□□□ 0
CDK5RAP3-202ENST00000536708 RAB11FIP4Q86YS3 637 aa15.08■□□□□ 0
CDK5RAP3-202ENST00000536708 CDAN1Q8IWY9 1227 aa15.08■□□□□ 0
CDK5RAP3-202ENST00000536708 DDTLA6NHG4 134 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 TCP10L2B9ZVM9 353 aa15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 RANBP6O60518 1105 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 NMT2O60551 498 aa15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 RPS12P25398 132 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 ZNF280AP59817 542 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 FAM47AQ5JRC9 791 aa15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 GTF3C6Q969F1 213 aa15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 ZBED3Q96IU2 234 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 AGXT2Q9BYV1 514 aa15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 RNF41Q9H4P4 317 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 CNNM2Q9H8M5 875 aa15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 VEZTQ9HBM0 779 aa15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 ZNF70Q9UC06 446 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 GREB1LQ9C091 1923 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 DDNO94850 711 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 SPDYE2Q495Y8 402 aa15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 CDC37L1Q7L3B6 337 aa15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 IDI2Q9BXS1 227 aa15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 KRT23Q9C075 422 aa15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 CNOT7Q9UIV1 285 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 CNTNAP1P78357 1384 aa15.07■□□□□ 0
CDK5RAP3-202ENST00000536708 FGRP09769 529 aa15.06■□□□□ 0
CDK5RAP3-202ENST00000536708 TTC6Q86TZ1 520 aa15.06■□□□□ 0
CDK5RAP3-202ENST00000536708 AMOTL1Q8IY63 956 aa15.06■□□□□ 0
CDK5RAP3-202ENST00000536708 GPC2Q8N158 579 aa15.06■□□□□ 0
CDK5RAP3-202ENST00000536708 SCAND2PQ9GZW5 306 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-202ENST00000536708 DNAJC18Q9H819 358 aa15.06■□□□□ 0
CDK5RAP3-202ENST00000536708 NAP1L2Q9ULW6 460 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-202ENST00000536708 MYH4Q9Y623 1939 aa15.06■□□□□ 0
CDK5RAP3-202ENST00000536708 SH2B2O14492 632 aaPredicted RBP15.05■□□□□ 0
CDK5RAP3-202ENST00000536708 TRPM4Q8TD43 1214 aa15.05■□□□□ 0
CDK5RAP3-202ENST00000536708 LLPHQ9BRT6 129 aaKnown RBP15.05■□□□□ 0
CDK5RAP3-202ENST00000536708 ORC4O43929 436 aa15.05■□□□□ -0
CDK5RAP3-202ENST00000536708 RASA1P20936 1047 aa15.05■□□□□ -0
CDK5RAP3-202ENST00000536708 PDE4BQ07343 736 aa15.05■□□□□ -0
CDK5RAP3-202ENST00000536708 C16orf86Q6ZW13 317 aa15.05■□□□□ -0
CDK5RAP3-202ENST00000536708 ZSCAN29Q8IWY8 852 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-202ENST00000536708 MTMR14Q8NCE2 650 aa15.05■□□□□ -0
CDK5RAP3-202ENST00000536708 SMARCC2Q8TAQ2 1214 aa15.05■□□□□ -0
CDK5RAP3-202ENST00000536708 ESR2Q92731 530 aa15.05■□□□□ -0
CDK5RAP3-202ENST00000536708 MYL10Q9BUA6 226 aa15.05■□□□□ -0
CDK5RAP3-202ENST00000536708 LY9Q9HBG7 655 aa15.05■□□□□ -0
CDK5RAP3-202ENST00000536708 ATAD5Q96QE3 1844 aa15.05■□□□□ -0
CDK5RAP3-202ENST00000536708 TNKSO95271 1327 aa15.05■□□□□ -0
CDK5RAP3-202ENST00000536708 WDR19Q8NEZ3 1342 aa15.05■□□□□ -0
CDK5RAP3-202ENST00000536708 SLC3A2P08195 630 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 RXRAP19793 462 aa15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 EPS15P42566 896 aa15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 CDK8P49336 464 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms