RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 STRBPQ96SI9 672 aaKnown RBP15.86■□□□□ 0.13
PRKDC-206ENST00000536429 SEC62Q99442 399 aaKnown RBP15.86■□□□□ 0.13
PRKDC-206ENST00000536429 SLC4A4Q9Y6R1 1079 aa15.86■□□□□ 0.13
PRKDC-206ENST00000536429 DOCK1Q14185 1865 aa15.86■□□□□ 0.13
PRKDC-206ENST00000536429 GH2P01242 217 aa15.85■□□□□ 0.13
PRKDC-206ENST00000536429 CYP2C8P10632 490 aa15.85■□□□□ 0.13
PRKDC-206ENST00000536429 TREML2Q5T2D2 321 aa15.85■□□□□ 0.13
PRKDC-206ENST00000536429 CHD1LQ86WJ1 897 aa15.85■□□□□ 0.13
PRKDC-206ENST00000536429 ZNF280CQ8ND82 737 aa15.85■□□□□ 0.13
PRKDC-206ENST00000536429 FSD1Q9BTV5 496 aa15.85■□□□□ 0.13
PRKDC-206ENST00000536429 ZCCHC17Q9NP64 241 aaKnown RBP15.85■□□□□ 0.13
PRKDC-206ENST00000536429 ATP8A2Q9NTI2 1148 aa15.85■□□□□ 0.13
PRKDC-206ENST00000536429 GPAA1O43292 621 aa15.84■□□□□ 0.13
PRKDC-206ENST00000536429 TLR2O60603 784 aa15.84■□□□□ 0.13
PRKDC-206ENST00000536429 ASNSP08243 561 aa15.84■□□□□ 0.13
PRKDC-206ENST00000536429 HMGCS2P54868 508 aa15.84■□□□□ 0.13
PRKDC-206ENST00000536429 SP3Q02447 781 aa15.84■□□□□ 0.13
PRKDC-206ENST00000536429 CPA4Q9UI42 421 aa15.84■□□□□ 0.13
PRKDC-206ENST00000536429 ADGRA2Q96PE1 1338 aa15.84■□□□□ 0.13
PRKDC-206ENST00000536429 PHIPQ8WWQ0 1821 aa15.84■□□□□ 0.13
PRKDC-206ENST00000536429 GSG1L2A8MUP6 293 aa15.83■□□□□ 0.12
PRKDC-206ENST00000536429 USP17L12C9JPN9 530 aa15.83■□□□□ 0.12
PRKDC-206ENST00000536429 USP17L21D6R901 530 aa15.83■□□□□ 0.12
PRKDC-206ENST00000536429 ZFYP08048 801 aaPredicted RBP15.83■□□□□ 0.12
PRKDC-206ENST00000536429 GUCY1A2P33402 732 aa15.83■□□□□ 0.12
PRKDC-206ENST00000536429 MTMR2Q13614 643 aa15.83■□□□□ 0.12
PRKDC-206ENST00000536429 CERKLQ49MI3 558 aaPredicted RBP15.83■□□□□ 0.12
PRKDC-206ENST00000536429 C17orf99Q6UX52 265 aa15.83■□□□□ 0.12
PRKDC-206ENST00000536429 FASTKD5Q7L8L6 764 aaKnown RBP15.83■□□□□ 0.12
PRKDC-206ENST00000536429 PLEKHM2Q8IWE5 1019 aa15.83■□□□□ 0.12
PRKDC-206ENST00000536429 WDR18Q9BV38 432 aa15.83■□□□□ 0.12
PRKDC-206ENST00000536429 EPB41L4AQ9HCS5 686 aaPredicted RBP15.83■□□□□ 0.12
PRKDC-206ENST00000536429 MYH1P12882 1939 aa15.83■□□□□ 0.12
PRKDC-206ENST00000536429 NAV1Q8NEY1 1877 aa15.82■□□□□ 0.12
PRKDC-206ENST00000536429 CENPFP49454 3210 aa15.82■□□□□ 0.12
PRKDC-206ENST00000536429 ECM2O94769 699 aaPredicted RBP15.82■□□□□ 0.12
PRKDC-206ENST00000536429 ZMYM1Q5SVZ6 1142 aa15.82■□□□□ 0.12
PRKDC-206ENST00000536429 C12orf60Q5U649 245 aa15.82■□□□□ 0.12
PRKDC-206ENST00000536429 CTR9Q6PD62 1173 aa15.82■□□□□ 0.12
PRKDC-206ENST00000536429 OTOP1Q7RTM1 612 aa15.82■□□□□ 0.12
PRKDC-206ENST00000536429 ARHGAP39Q9C0H5 1083 aa15.82■□□□□ 0.12
PRKDC-206ENST00000536429 AGTPBP1Q9UPW5 1226 aa15.82■□□□□ 0.12
PRKDC-206ENST00000536429 TRIM17Q9Y577 477 aa15.82■□□□□ 0.12
PRKDC-206ENST00000536429 PDE4AP27815 886 aa15.81■□□□□ 0.12
PRKDC-206ENST00000536429 CTGFP29279 349 aa15.81■□□□□ 0.12
PRKDC-206ENST00000536429 BACE1P56817 501 aa15.81■□□□□ 0.12
PRKDC-206ENST00000536429 RAB3GAP1Q15042 981 aa15.81■□□□□ 0.12
PRKDC-206ENST00000536429 ABCB5Q2M3G0 1257 aa15.81■□□□□ 0.12
PRKDC-206ENST00000536429 SH3D19Q5HYK7 790 aa15.81■□□□□ 0.12
PRKDC-206ENST00000536429 CCDC129Q6ZRS4 1044 aa15.81■□□□□ 0.12
PRKDC-206ENST00000536429 ACER1Q8TDN7 264 aa15.81■□□□□ 0.12
PRKDC-206ENST00000536429 ERO1AQ96HE7 468 aa15.81■□□□□ 0.12
PRKDC-206ENST00000536429 PARK7Q99497 189 aaKnown RBP15.81■□□□□ 0.12
PRKDC-206ENST00000536429 TBC1D2Q9BYX2 928 aa15.81■□□□□ 0.12
PRKDC-206ENST00000536429 AS3MTQ9HBK9 375 aa15.81■□□□□ 0.12
PRKDC-206ENST00000536429 GINM1Q9NU53 330 aa15.81■□□□□ 0.12
PRKDC-206ENST00000536429 MYH7P12883 1935 aa15.8■□□□□ 0.12
PRKDC-206ENST00000536429 FOXP2O15409 715 aa15.8■□□□□ 0.12
PRKDC-206ENST00000536429 SEPT2Q15019 361 aa15.8■□□□□ 0.12
PRKDC-206ENST00000536429 EVI5LQ96CN4 794 aa15.8■□□□□ 0.12
PRKDC-206ENST00000536429 HPS5Q9UPZ3 1129 aa15.8■□□□□ 0.12
PRKDC-206ENST00000536429 CCDC85CA6NKD9 419 aa15.79■□□□□ 0.12
PRKDC-206ENST00000536429 BCRP11274 1271 aa15.79■□□□□ 0.12
PRKDC-206ENST00000536429 AKR1B1P15121 316 aa15.79■□□□□ 0.12
PRKDC-206ENST00000536429 CDK8P49336 464 aa15.79■□□□□ 0.12
PRKDC-206ENST00000536429 LRRFIP1Q32MZ4 808 aaKnown RBP15.79■□□□□ 0.12
PRKDC-206ENST00000536429 C16orf86Q6ZW13 317 aa15.79■□□□□ 0.12
PRKDC-206ENST00000536429 CLEC10AQ8IUN9 316 aa15.79■□□□□ 0.12
PRKDC-206ENST00000536429 STK11IPQ8N1F8 1099 aa15.79■□□□□ 0.12
PRKDC-206ENST00000536429 PROCA1Q8NCQ7 364 aaPredicted RBP15.79■□□□□ 0.12
PRKDC-206ENST00000536429 EFCC1Q9HA90 598 aa15.79■□□□□ 0.12
PRKDC-206ENST00000536429 EMILIN3Q9NT22 766 aa15.79■□□□□ 0.12
PRKDC-206ENST00000536429 SLC45A1Q9Y2W3 748 aa15.79■□□□□ 0.12
PRKDC-206ENST00000536429 ATAD5Q96QE3 1844 aa15.79■□□□□ 0.12
PRKDC-206ENST00000536429 PTPRFP10586 1907 aa15.78■□□□□ 0.12
PRKDC-206ENST00000536429 USP17L10C9JJH3 530 aa15.78■□□□□ 0.12
PRKDC-206ENST00000536429 MPHOSPH10O00566 681 aaKnown RBP15.78■□□□□ 0.12
PRKDC-206ENST00000536429 LACTBP83111 547 aaPredicted RBP15.78■□□□□ 0.12
PRKDC-206ENST00000536429 ZYXQ15942 572 aaKnown RBP15.78■□□□□ 0.12
PRKDC-206ENST00000536429 DDRGK1Q96HY6 314 aa15.78■□□□□ 0.12
PRKDC-206ENST00000536429 FAM227BQ96M60 508 aa15.78■□□□□ 0.12
PRKDC-206ENST00000536429 OSBPL3Q9H4L5 887 aa15.78■□□□□ 0.12
PRKDC-206ENST00000536429 SWAP70Q9UH65 585 aa15.78■□□□□ 0.12
PRKDC-206ENST00000536429 BAZ2AQ9UIF9 1905 aaKnown RBP15.77■□□□□ 0.12
PRKDC-206ENST00000536429 A0A0D9SFI3 127 aa15.77■□□□□ 0.12
PRKDC-206ENST00000536429 A0A1W2PRG0 241 aa15.77■□□□□ 0.12
PRKDC-206ENST00000536429 MINDY4BA8MYZ0 360 aa15.77■□□□□ 0.12
PRKDC-206ENST00000536429 TRIM6-TRIM34B2RNG4 842 aa15.77■□□□□ 0.12
PRKDC-206ENST00000536429 PATL2C9JE40 543 aaKnown RBP15.77■□□□□ 0.12
PRKDC-206ENST00000536429 APPP05067 770 aa15.77■□□□□ 0.12
PRKDC-206ENST00000536429 PKN2Q16513 984 aaKnown RBP15.77■□□□□ 0.12
PRKDC-206ENST00000536429 SBK1Q52WX2 424 aa15.77■□□□□ 0.12
PRKDC-206ENST00000536429 VPS53Q5VIR6 699 aa15.77■□□□□ 0.12
PRKDC-206ENST00000536429 GIMAP6Q6P9H5 292 aa15.77■□□□□ 0.12
PRKDC-206ENST00000536429 FBXO46Q6PJ61 603 aaPredicted RBP15.77■□□□□ 0.12
PRKDC-206ENST00000536429 IFNL3Q8IZI9 196 aa15.77■□□□□ 0.12
PRKDC-206ENST00000536429 RILPL2Q969X0 211 aa15.77■□□□□ 0.12
PRKDC-206ENST00000536429 ASCC2Q9H1I8 757 aaPredicted RBP15.77■□□□□ 0.12
PRKDC-206ENST00000536429 CABP5Q9NP86 173 aa15.77■□□□□ 0.12
PRKDC-206ENST00000536429 TMOD4Q9NZQ9 345 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms