RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SHISA4Q96DD7 197 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 MAST2Q6P0Q8 1798 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 MYH6P13533 1939 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 GOLGA6L19H0YKK7 550 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 ZBTB22O15209 634 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 FUT2Q10981 343 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 PPP2R5BQ15173 497 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 GRIK5Q16478 980 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 FAM47AQ5JRC9 791 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 SPTY2D1Q68D10 685 aaPredicted RBP15.43■□□□□ 0.06
VPS33B-202ENST00000535906 CCDC186Q7Z3E2 898 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 CATIPQ7Z7H3 387 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 JMYQ8N9B5 988 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 RNF26Q9BY78 433 aaPredicted RBP15.43■□□□□ 0.06
VPS33B-202ENST00000535906 FOXP1Q9H334 677 aaPredicted RBP15.43■□□□□ 0.06
VPS33B-202ENST00000535906 HPSEQ9Y251 543 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 XDHP47989 1333 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 ORC4O43929 436 aa15.42■□□□□ 0.06
VPS33B-202ENST00000535906 CDC25BP30305 580 aa15.42■□□□□ 0.06
VPS33B-202ENST00000535906 SLC4A8Q2Y0W8 1093 aa15.42■□□□□ 0.06
VPS33B-202ENST00000535906 DRC7Q8IY82 874 aa15.42■□□□□ 0.06
VPS33B-202ENST00000535906 OXER1Q8TDS5 423 aa15.42■□□□□ 0.06
VPS33B-202ENST00000535906 MAP7D2Q96T17 732 aa15.42■□□□□ 0.06
VPS33B-202ENST00000535906 FAM13BQ9NYF5 915 aa15.42■□□□□ 0.06
VPS33B-202ENST00000535906 hCG_1642624A0A1W2PR95 340 aa15.42■□□□□ 0.06
VPS33B-202ENST00000535906 PLEKHA8P1O95397 391 aa15.42■□□□□ 0.06
VPS33B-202ENST00000535906 LDHBP07195 334 aaKnown RBP15.42■□□□□ 0.06
VPS33B-202ENST00000535906 SLC3A2P08195 630 aaKnown RBP15.42■□□□□ 0.06
VPS33B-202ENST00000535906 SYKP43405 635 aa15.42■□□□□ 0.06
VPS33B-202ENST00000535906 PKN1Q16512 942 aa15.42■□□□□ 0.06
VPS33B-202ENST00000535906 SBK1Q52WX2 424 aa15.42■□□□□ 0.06
VPS33B-202ENST00000535906 SARM1Q6SZW1 724 aa15.42■□□□□ 0.06
VPS33B-202ENST00000535906 WDR66Q8TBY9 1149 aa15.42■□□□□ 0.06
VPS33B-202ENST00000535906 RPGRQ92834 1020 aaKnown RBP15.42■□□□□ 0.06
VPS33B-202ENST00000535906 ARPP21Q9UBL0 812 aaPredicted RBP15.42■□□□□ 0.06
VPS33B-202ENST00000535906 LAMB1P07942 1786 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 DLEC1Q9Y238 1755 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 KIAA1551Q9HCM1 1747 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 SERPINB2P05120 415 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 USP17L8P0C7I0 530 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 GPSM2P81274 684 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 DPCR1Q3MIW9 517 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 CRY2Q49AN0 593 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 RESP18Q5W5W9 173 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 TMED8Q6PL24 325 aaPredicted RBP15.41■□□□□ 0.06
VPS33B-202ENST00000535906 CEP57L1Q8IYX8 460 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 CERKQ8TCT0 537 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 UBE2Q2Q8WVN8 375 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 QTRT2Q9H974 415 aaKnown RBP15.41■□□□□ 0.06
VPS33B-202ENST00000535906 MCM9Q9NXL9 1143 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 NRBP1Q9UHY1 535 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 BECN2A8MW95 431 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 GTF2F1P35269 517 aaKnown RBP eCLIP15.41■□□□□ 0.06
VPS33B-202ENST00000535906 DIXDC1Q155Q3 683 aa15.41■□□□□ 0.06
VPS33B-202ENST00000535906 MKRN1Q9UHC7 482 aaKnown RBP15.41■□□□□ 0.06
VPS33B-202ENST00000535906 FAM237AA0A1B0GTK4 181 aa15.4■□□□□ 0.06
VPS33B-202ENST00000535906 CUTAO60888 179 aa15.4■□□□□ 0.06
VPS33B-202ENST00000535906 AOPEPQ8N6M6 819 aa15.4■□□□□ 0.06
VPS33B-202ENST00000535906 VPS54Q9P1Q0 977 aa15.4■□□□□ 0.06
VPS33B-202ENST00000535906 CLIP2Q9UDT6 1046 aa15.4■□□□□ 0.06
VPS33B-202ENST00000535906 V9GY48 417 aaPredicted RBP15.4■□□□□ 0.06
VPS33B-202ENST00000535906 BIN1O00499 593 aa15.39■□□□□ 0.05
VPS33B-202ENST00000535906 AKAP17AQ02040 695 aaKnown RBP15.39■□□□□ 0.05
VPS33B-202ENST00000535906 RILPL1Q5EBL4 403 aa15.39■□□□□ 0.05
VPS33B-202ENST00000535906 ZNF804AQ7Z570 1209 aa15.39■□□□□ 0.05
VPS33B-202ENST00000535906 SH3RF3Q8TEJ3 882 aaPredicted RBP15.39■□□□□ 0.05
VPS33B-202ENST00000535906 TIGD1Q96MW7 591 aa15.39■□□□□ 0.05
VPS33B-202ENST00000535906 RBM28Q9NW13 759 aaKnown RBP15.39■□□□□ 0.05
VPS33B-202ENST00000535906 PCDHB6Q9Y5E3 794 aa15.39■□□□□ 0.05
VPS33B-202ENST00000535906 PRPF3O43395 683 aaKnown RBP15.39■□□□□ 0.05
VPS33B-202ENST00000535906 CALM1P0DP23 149 aa15.39■□□□□ 0.05
VPS33B-202ENST00000535906 CALM2P0DP24 149 aa15.39■□□□□ 0.05
VPS33B-202ENST00000535906 CALM3P0DP25 149 aa15.39■□□□□ 0.05
VPS33B-202ENST00000535906 PDE4BQ07343 736 aa15.39■□□□□ 0.05
VPS33B-202ENST00000535906 C15orf52Q6ZUT6 534 aaKnown RBP15.39■□□□□ 0.05
VPS33B-202ENST00000535906 MTERF4Q7Z6M4 381 aaKnown RBP15.39■□□□□ 0.05
VPS33B-202ENST00000535906 MRFAP1L1Q96HT8 127 aa15.39■□□□□ 0.05
VPS33B-202ENST00000535906 NAT10Q9H0A0 1025 aaKnown RBP15.39■□□□□ 0.05
VPS33B-202ENST00000535906 DDAH1O94760 285 aa15.38■□□□□ 0.05
VPS33B-202ENST00000535906 TRIM37O94972 964 aa15.38■□□□□ 0.05
VPS33B-202ENST00000535906 PRKCSHP14314 528 aaPredicted RBP15.38■□□□□ 0.05
VPS33B-202ENST00000535906 ST5P78524 1137 aa15.38■□□□□ 0.05
VPS33B-202ENST00000535906 GRIN1Q05586 938 aa15.38■□□□□ 0.05
VPS33B-202ENST00000535906 SPECC1Q5M775 1068 aa15.38■□□□□ 0.05
VPS33B-202ENST00000535906 KRI1Q8N9T8 703 aaKnown RBP15.38■□□□□ 0.05
VPS33B-202ENST00000535906 CABP5Q9NP86 173 aa15.38■□□□□ 0.05
VPS33B-202ENST00000535906 TSPY2A6NKD2 308 aa15.38■□□□□ 0.05
VPS33B-202ENST00000535906 UFL1O94874 794 aa15.38■□□□□ 0.05
VPS33B-202ENST00000535906 USP5P45974 858 aa15.38■□□□□ 0.05
VPS33B-202ENST00000535906 RBM6P78332 1123 aaKnown RBP15.38■□□□□ 0.05
VPS33B-202ENST00000535906 ZRSR1Q15695 479 aaKnown RBP15.38■□□□□ 0.05
VPS33B-202ENST00000535906 GLIPR1L2Q4G1C9 344 aa15.38■□□□□ 0.05
VPS33B-202ENST00000535906 SLC27A3Q5K4L6 730 aa15.38■□□□□ 0.05
VPS33B-202ENST00000535906 C12orf60Q5U649 245 aa15.38■□□□□ 0.05
VPS33B-202ENST00000535906 TMTC3Q6ZXV5 915 aa15.38■□□□□ 0.05
VPS33B-202ENST00000535906 PHF20Q9BVI0 1012 aa15.38■□□□□ 0.05
VPS33B-202ENST00000535906 BAZ2BQ9UIF8 2168 aaKnown RBP15.38■□□□□ 0.05
VPS33B-202ENST00000535906 FAM205CA6NFA0 338 aa15.37■□□□□ 0.05
VPS33B-202ENST00000535906 DDR1Q08345 913 aa15.37■□□□□ 0.05
VPS33B-202ENST00000535906 LRMPQ12912 555 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms