RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 NT5C2P49902 561 aa24.49■■□□□ 1.51
PDXDC1-205ENST00000535621 PICALMQ13492 652 aa24.49■■□□□ 1.51
PDXDC1-205ENST00000535621 DDX4Q9NQI0 724 aaKnown RBP24.49■■□□□ 1.51
PDXDC1-205ENST00000535621 USP40Q9NVE5 1235 aa24.49■■□□□ 1.51
PDXDC1-205ENST00000535621 DICER1Q9UPY3 1922 aaKnown RBP24.49■■□□□ 1.51
PDXDC1-205ENST00000535621 GSE1Q14687 1217 aa24.49■■□□□ 1.51
PDXDC1-205ENST00000535621 NTRK3Q16288 839 aa24.49■■□□□ 1.51
PDXDC1-205ENST00000535621 FAM47AQ5JRC9 791 aa24.49■■□□□ 1.51
PDXDC1-205ENST00000535621 ZDHHC15Q96MV8 337 aa24.49■■□□□ 1.51
PDXDC1-205ENST00000535621 MRIQ9BWK5 157 aa24.49■■□□□ 1.51
PDXDC1-205ENST00000535621 CNPY2Q9Y2B0 182 aa24.49■■□□□ 1.51
PDXDC1-205ENST00000535621 WDHD1O75717 1129 aaPredicted RBP24.48■■□□□ 1.51
PDXDC1-205ENST00000535621 CDKL5O76039 1030 aa24.48■■□□□ 1.51
PDXDC1-205ENST00000535621 KLHL40Q2TBA0 621 aa24.48■■□□□ 1.51
PDXDC1-205ENST00000535621 ZNF654Q8IZM8 581 aa24.48■■□□□ 1.51
PDXDC1-205ENST00000535621 ORC3Q9UBD5 711 aaPredicted RBP24.48■■□□□ 1.51
PDXDC1-205ENST00000535621 DDX49Q9Y6V7 483 aaKnown RBP24.48■■□□□ 1.51
PDXDC1-205ENST00000535621 DNM1Q05193 864 aaKnown RBP24.47■■□□□ 1.51
PDXDC1-205ENST00000535621 NFIAQ12857 509 aa24.47■■□□□ 1.51
PDXDC1-205ENST00000535621 CIAPIN1Q6FI81 312 aa24.47■■□□□ 1.51
PDXDC1-205ENST00000535621 GDPD2Q9HCC8 539 aa24.47■■□□□ 1.51
PDXDC1-205ENST00000535621 CFAP100Q494V2 611 aa24.47■■□□□ 1.51
PDXDC1-205ENST00000535621 IFIT1BQ5T764 474 aaKnown RBP24.47■■□□□ 1.51
PDXDC1-205ENST00000535621 CPLX2Q6PUV4 134 aaKnown RBP24.47■■□□□ 1.51
PDXDC1-205ENST00000535621 TMEM87AQ8NBN3 555 aa24.47■■□□□ 1.51
PDXDC1-205ENST00000535621 TSPY2A6NKD2 308 aa24.46■■□□□ 1.51
PDXDC1-205ENST00000535621 PRMT6Q96LA8 375 aaPredicted RBP24.46■■□□□ 1.51
PDXDC1-205ENST00000535621 SERPINA10Q9UK55 444 aa24.46■■□□□ 1.51
PDXDC1-205ENST00000535621 NMT2O60551 498 aa24.45■■□□□ 1.51
PDXDC1-205ENST00000535621 HDLBPQ00341 1268 aaKnown RBP24.45■■□□□ 1.51
PDXDC1-205ENST00000535621 RESTQ13127 1097 aa24.45■■□□□ 1.51
PDXDC1-205ENST00000535621 USP48Q86UV5 1035 aa24.45■■□□□ 1.51
PDXDC1-205ENST00000535621 MKNK2Q9HBH9 465 aa24.45■■□□□ 1.51
PDXDC1-205ENST00000535621 ZNF541Q9H0D2 1346 aa24.45■■□□□ 1.51
PDXDC1-205ENST00000535621 FOSBP53539 338 aa24.45■■□□□ 1.5
PDXDC1-205ENST00000535621 RTN1Q16799 776 aa24.45■■□□□ 1.5
PDXDC1-205ENST00000535621 FANCBQ8NB91 859 aa24.45■■□□□ 1.5
PDXDC1-205ENST00000535621 SLC44A5Q8NCS7 719 aa24.45■■□□□ 1.5
PDXDC1-205ENST00000535621 GZF1Q9H116 711 aaPredicted RBP24.45■■□□□ 1.5
PDXDC1-205ENST00000535621 MYO3BQ8WXR4 1341 aa24.45■■□□□ 1.5
PDXDC1-205ENST00000535621 FAM173BQ6P4H8 233 aa24.44■■□□□ 1.5
PDXDC1-205ENST00000535621 C16orf86Q6ZW13 317 aa24.44■■□□□ 1.5
PDXDC1-205ENST00000535621 ZFPM1Q8IX07 1006 aa24.44■■□□□ 1.5
PDXDC1-205ENST00000535621 ZSCAN16Q9H4T2 348 aaPredicted RBP24.44■■□□□ 1.5
PDXDC1-205ENST00000535621 TDRD3Q9H7E2 651 aaKnown RBP24.44■■□□□ 1.5
PDXDC1-205ENST00000535621 TFAP4Q01664 338 aa24.44■■□□□ 1.5
PDXDC1-205ENST00000535621 GPT2Q8TD30 523 aa24.44■■□□□ 1.5
PDXDC1-205ENST00000535621 NUP133Q8WUM0 1156 aa24.44■■□□□ 1.5
PDXDC1-205ENST00000535621 PHKBQ93100 1093 aa24.44■■□□□ 1.5
PDXDC1-205ENST00000535621 ZNF287Q9HBT7 754 aa24.44■■□□□ 1.5
PDXDC1-205ENST00000535621 FZD9O00144 591 aa24.43■■□□□ 1.5
PDXDC1-205ENST00000535621 IFNAR1P17181 557 aa24.43■■□□□ 1.5
PDXDC1-205ENST00000535621 NCLP19338 710 aaKnown RBP24.43■■□□□ 1.5
PDXDC1-205ENST00000535621 GJA3Q9Y6H8 435 aa24.43■■□□□ 1.5
PDXDC1-205ENST00000535621 CCDC196A0A1B0GTZ2 297 aa24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 SLURP2P0DP57 97 aa24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 RASA1P20936 1047 aa24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 TROAPQ12815 778 aa24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 PPP2R5BQ15173 497 aa24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 RCSD1Q6JBY9 416 aa24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 CATIPQ7Z7H3 387 aa24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 FBXO18Q8NFZ0 1043 aa24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 C8orf76Q96K31 380 aa24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 IL17RBQ9NRM6 502 aa24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 CDK8P49336 464 aa24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 GUCY1B3Q02153 619 aa24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 TCP10Q12799 353 aa24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 ZNF444Q8N0Y2 327 aaPredicted RBP24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 AGBL3Q8NEM8 1001 aa24.42■■□□□ 1.5
PDXDC1-205ENST00000535621 FIBPO43427 364 aa24.41■■□□□ 1.5
PDXDC1-205ENST00000535621 RGS22Q8NE09 1264 aa24.41■■□□□ 1.5
PDXDC1-205ENST00000535621 STK36Q9NRP7 1315 aa24.41■■□□□ 1.5
PDXDC1-205ENST00000535621 SIPA1L1O43166 1804 aa24.41■■□□□ 1.5
PDXDC1-205ENST00000535621 EGFRP00533 1210 aa24.4■■□□□ 1.5
PDXDC1-205ENST00000535621 KRT85P78386 507 aa24.4■■□□□ 1.5
PDXDC1-205ENST00000535621 TCP11L1Q9NUJ3 509 aa24.4■■□□□ 1.5
PDXDC1-205ENST00000535621 FAM198AQ9UFP1 575 aa24.4■■□□□ 1.5
PDXDC1-205ENST00000535621 CLRN2A0PK11 232 aa24.4■■□□□ 1.5
PDXDC1-205ENST00000535621 DDAH1O94760 285 aa24.4■■□□□ 1.5
PDXDC1-205ENST00000535621 FMNL1O95466 1100 aaPredicted RBP24.4■■□□□ 1.5
PDXDC1-205ENST00000535621 TSPY3P0CV98 308 aa24.4■■□□□ 1.5
PDXDC1-205ENST00000535621 TSPY8P0CW00 308 aa24.4■■□□□ 1.5
PDXDC1-205ENST00000535621 LMNB1P20700 586 aa24.4■■□□□ 1.5
PDXDC1-205ENST00000535621 DGKHQ86XP1 1220 aa24.4■■□□□ 1.5
PDXDC1-205ENST00000535621 OSBPL5Q9H0X9 879 aaPredicted RBP24.4■■□□□ 1.5
PDXDC1-205ENST00000535621 SPDYE2BA6NHP3 402 aa24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 GADD45BO75293 160 aaPredicted RBP24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 SPDYE6P0CI01 402 aa24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 CALM1P0DP23 149 aa24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 CALM2P0DP24 149 aa24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 CALM3P0DP25 149 aa24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 GMPSP49915 693 aaPredicted RBP24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 SSRP1Q08945 709 aaKnown RBP24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 TNIP1Q15025 636 aa24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 OTUD7BQ6GQQ9 843 aa24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 NBPF11Q86T75 865 aa24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 TTC6Q86TZ1 520 aa24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 OGFOD1Q8N543 542 aa24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 ANKS1AQ92625 1134 aa24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 AIFM3Q96NN9 605 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms