RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 C12orf60Q5U649 245 aa25.68■■□□□ 1.7
PKP3-211ENST00000534401 CCDC84Q86UT8 332 aaPredicted RBP25.68■■□□□ 1.7
PKP3-211ENST00000534401 SLC4A4Q9Y6R1 1079 aa25.68■■□□□ 1.7
PKP3-211ENST00000534401 SLC4A8Q2Y0W8 1093 aa25.67■■□□□ 1.7
PKP3-211ENST00000534401 SH3D19Q5HYK7 790 aa25.67■■□□□ 1.7
PKP3-211ENST00000534401 FASTKD5Q7L8L6 764 aaKnown RBP25.67■■□□□ 1.7
PKP3-211ENST00000534401 ZNF280CQ8ND82 737 aa25.67■■□□□ 1.7
PKP3-211ENST00000534401 FSD1Q9BTV5 496 aa25.67■■□□□ 1.7
PKP3-211ENST00000534401 ZBTB21Q9ULJ3 1066 aa25.67■■□□□ 1.7
PKP3-211ENST00000534401 M0R2C6 588 aa25.66■■□□□ 1.7
PKP3-211ENST00000534401 GPAA1O43292 621 aa25.66■■□□□ 1.7
PKP3-211ENST00000534401 FKTNO75072 461 aa25.66■■□□□ 1.7
PKP3-211ENST00000534401 CYP2D6P10635 497 aa25.66■■□□□ 1.7
PKP3-211ENST00000534401 TAF1CQ15572 869 aaPredicted RBP25.66■■□□□ 1.7
PKP3-211ENST00000534401 SHROOM1Q2M3G4 852 aaPredicted RBP25.66■■□□□ 1.7
PKP3-211ENST00000534401 SBK1Q52WX2 424 aa25.66■■□□□ 1.7
PKP3-211ENST00000534401 TRIM34Q9BYJ4 488 aa25.66■■□□□ 1.7
PKP3-211ENST00000534401 ZFYVE28Q9HCC9 887 aa25.66■■□□□ 1.7
PKP3-211ENST00000534401 SLC45A1Q9Y2W3 748 aa25.66■■□□□ 1.7
PKP3-211ENST00000534401 LOC285556D6RIA3 1793 aa25.66■■□□□ 1.7
PKP3-211ENST00000534401 USP17L12C9JPN9 530 aa25.65■■□□□ 1.7
PKP3-211ENST00000534401 USP17L21D6R901 530 aa25.65■■□□□ 1.7
PKP3-211ENST00000534401 GNAT2P19087 354 aa25.65■■□□□ 1.7
PKP3-211ENST00000534401 SPP2Q13103 211 aa25.65■■□□□ 1.7
PKP3-211ENST00000534401 CTR9Q6PD62 1173 aa25.65■■□□□ 1.7
PKP3-211ENST00000534401 ADGRA2Q96PE1 1338 aa25.64■■□□□ 1.7
PKP3-211ENST00000534401 TLR2O60603 784 aa25.64■■□□□ 1.7
PKP3-211ENST00000534401 PDE4AP27815 886 aa25.64■■□□□ 1.7
PKP3-211ENST00000534401 PROCA1Q8NCQ7 364 aaPredicted RBP25.64■■□□□ 1.7
PKP3-211ENST00000534401 SEC62Q99442 399 aaKnown RBP25.64■■□□□ 1.7
PKP3-211ENST00000534401 SWAP70Q9UH65 585 aa25.64■■□□□ 1.7
PKP3-211ENST00000534401 TRIM75PA6NK02 468 aa25.63■■□□□ 1.69
PKP3-211ENST00000534401 PDHXO00330 501 aa25.63■■□□□ 1.69
PKP3-211ENST00000534401 GDF11O95390 407 aa25.63■■□□□ 1.69
PKP3-211ENST00000534401 CERKLQ49MI3 558 aaPredicted RBP25.63■■□□□ 1.69
PKP3-211ENST00000534401 AS3MTQ9HBK9 375 aa25.63■■□□□ 1.69
PKP3-211ENST00000534401 PATL2C9JE40 543 aaKnown RBP25.62■■□□□ 1.69
PKP3-211ENST00000534401 SMIM22K7EJ46 135 aa25.62■■□□□ 1.69
PKP3-211ENST00000534401 GH2P01242 217 aa25.62■■□□□ 1.69
PKP3-211ENST00000534401 GUCY1A2P33402 732 aa25.62■■□□□ 1.69
PKP3-211ENST00000534401 C16orf86Q6ZW13 317 aa25.62■■□□□ 1.69
PKP3-211ENST00000534401 CTU1Q7Z7A3 348 aaKnown RBP25.62■■□□□ 1.69
PKP3-211ENST00000534401 EPB41L4AQ9HCS5 686 aaPredicted RBP25.62■■□□□ 1.69
PKP3-211ENST00000534401 MYH8P13535 1937 aa25.62■■□□□ 1.69
PKP3-211ENST00000534401 CYP2D7A0A087X1C5 515 aa25.61■■□□□ 1.69
PKP3-211ENST00000534401 BACE1P56817 501 aa25.61■■□□□ 1.69
PKP3-211ENST00000534401 C17orf99Q6UX52 265 aa25.61■■□□□ 1.69
PKP3-211ENST00000534401 DYNLL2Q96FJ2 89 aa25.61■■□□□ 1.69
PKP3-211ENST00000534401 DDRGK1Q96HY6 314 aa25.61■■□□□ 1.69
PKP3-211ENST00000534401 HELLSQ9NRZ9 838 aa25.61■■□□□ 1.69
PKP3-211ENST00000534401 ARPP21Q9UBL0 812 aaPredicted RBP25.61■■□□□ 1.69
PKP3-211ENST00000534401 AGTPBP1Q9UPW5 1226 aa25.61■■□□□ 1.69
PKP3-211ENST00000534401 C19orf81C9J6K1 198 aa25.6■■□□□ 1.69
PKP3-211ENST00000534401 FOXP2O15409 715 aa25.6■■□□□ 1.69
PKP3-211ENST00000534401 ABCB5Q2M3G0 1257 aa25.6■■□□□ 1.69
PKP3-211ENST00000534401 MCOLN1Q9GZU1 580 aa25.6■■□□□ 1.69
PKP3-211ENST00000534401 ROBO3Q96MS0 1386 aa25.59■■□□□ 1.69
PKP3-211ENST00000534401 CDK8P49336 464 aa25.59■■□□□ 1.69
PKP3-211ENST00000534401 SP3Q02447 781 aa25.59■■□□□ 1.69
PKP3-211ENST00000534401 SLC44A5Q8NCS7 719 aa25.59■■□□□ 1.69
PKP3-211ENST00000534401 CAP1Q01518 475 aa25.58■■□□□ 1.69
PKP3-211ENST00000534401 DGKZQ13574 1117 aa25.58■■□□□ 1.69
PKP3-211ENST00000534401 GADL1Q6ZQY3 521 aa25.58■■□□□ 1.69
PKP3-211ENST00000534401 AMOTL1Q8IY63 956 aa25.58■■□□□ 1.69
PKP3-211ENST00000534401 IFNL3Q8IZI9 196 aa25.58■■□□□ 1.69
PKP3-211ENST00000534401 CCDC17Q96LX7 622 aa25.58■■□□□ 1.69
PKP3-211ENST00000534401 USP17L10C9JJH3 530 aa25.57■■□□□ 1.68
PKP3-211ENST00000534401 HMGCS2P54868 508 aa25.57■■□□□ 1.68
PKP3-211ENST00000534401 PKN2Q16513 984 aaKnown RBP25.57■■□□□ 1.68
PKP3-211ENST00000534401 TREML2Q5T2D2 321 aa25.57■■□□□ 1.68
PKP3-211ENST00000534401 ERO1AQ96HE7 468 aa25.57■■□□□ 1.68
PKP3-211ENST00000534401 CABP5Q9NP86 173 aa25.57■■□□□ 1.68
PKP3-211ENST00000534401 BCRP11274 1271 aa25.56■■□□□ 1.68
PKP3-211ENST00000534401 HOXA7P31268 230 aaPredicted RBP25.56■■□□□ 1.68
PKP3-211ENST00000534401 C12orf42Q96LP6 360 aa25.56■■□□□ 1.68
PKP3-211ENST00000534401 PARK7Q99497 189 aaKnown RBP25.56■■□□□ 1.68
PKP3-211ENST00000534401 GREB1LQ9C091 1923 aaPredicted RBP25.56■■□□□ 1.68
PKP3-211ENST00000534401 A0A0D9SFI3 127 aa25.55■■□□□ 1.68
PKP3-211ENST00000534401 TRIM6-TRIM34B2RNG4 842 aa25.55■■□□□ 1.68
PKP3-211ENST00000534401 MTMR2Q13614 643 aa25.55■■□□□ 1.68
PKP3-211ENST00000534401 ALX1Q15699 326 aa25.55■■□□□ 1.68
PKP3-211ENST00000534401 FAM227BQ96M60 508 aa25.55■■□□□ 1.68
PKP3-211ENST00000534401 KIAA1683Q9H0B3 1180 aa25.55■■□□□ 1.68
PKP3-211ENST00000534401 EMILIN3Q9NT22 766 aa25.55■■□□□ 1.68
PKP3-211ENST00000534401 CYP2C8P10632 490 aa25.54■■□□□ 1.68
PKP3-211ENST00000534401 SDSP20132 328 aa25.54■■□□□ 1.68
PKP3-211ENST00000534401 SEPT2Q15019 361 aa25.54■■□□□ 1.68
PKP3-211ENST00000534401 MCMDC2Q4G0Z9 681 aa25.54■■□□□ 1.68
PKP3-211ENST00000534401 CCDC129Q6ZRS4 1044 aa25.54■■□□□ 1.68
PKP3-211ENST00000534401 TMEM179Q6ZVK1 233 aa25.54■■□□□ 1.68
PKP3-211ENST00000534401 SIAH1Q8IUQ4 282 aa25.54■■□□□ 1.68
PKP3-211ENST00000534401 ABHD8Q96I13 439 aa25.54■■□□□ 1.68
PKP3-211ENST00000534401 USP17L2Q6R6M4 530 aa25.53■■□□□ 1.68
PKP3-211ENST00000534401 CD99L2Q8TCZ2 262 aa25.53■■□□□ 1.68
PKP3-211ENST00000534401 ACER1Q8TDN7 264 aa25.53■■□□□ 1.68
PKP3-211ENST00000534401 RILPL2Q969X0 211 aa25.53■■□□□ 1.68
PKP3-211ENST00000534401 NACAP1Q9BZK3 213 aa25.53■■□□□ 1.68
PKP3-211ENST00000534401 AKR1B1P15121 316 aa25.52■■□□□ 1.68
PKP3-211ENST00000534401 NMIQ13287 307 aaPredicted RBP25.52■■□□□ 1.68
PKP3-211ENST00000534401 RAB3GAP1Q15042 981 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms