RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-223ENST00000534283 COG6Q9Y2V7 657 aa29.56■■■□□ 2.32
RELA-223ENST00000534283 SIPA1L1O43166 1804 aa29.55■■■□□ 2.32
RELA-223ENST00000534283 MAST2Q6P0Q8 1798 aa29.55■■■□□ 2.32
RELA-223ENST00000534283 TATDN1Q6P1N9 297 aa29.55■■■□□ 2.32
RELA-223ENST00000534283 RIOK1Q9BRS2 568 aaKnown RBP29.55■■■□□ 2.32
RELA-223ENST00000534283 UNC93B1Q9H1C4 597 aa29.55■■■□□ 2.32
RELA-223ENST00000534283 PTPRFP10586 1907 aa29.55■■■□□ 2.32
RELA-223ENST00000534283 C19orf81C9J6K1 198 aa29.54■■■□□ 2.32
RELA-223ENST00000534283 HLA-DOAP06340 250 aa29.54■■■□□ 2.32
RELA-223ENST00000534283 MORF4L1Q9UBU8 362 aa29.54■■■□□ 2.32
RELA-223ENST00000534283 GJD2Q9UKL4 321 aa29.54■■■□□ 2.32
RELA-223ENST00000534283 DDX19BQ9UMR2 479 aa29.54■■■□□ 2.32
RELA-223ENST00000534283 HABP4Q5JVS0 413 aaKnown RBP29.53■■■□□ 2.32
RELA-223ENST00000534283 COA7Q96BR5 231 aa29.53■■■□□ 2.32
RELA-223ENST00000534283 KIF1BPQ96EK5 621 aa29.53■■■□□ 2.32
RELA-223ENST00000534283 P2RX7Q99572 595 aaKnown RBP29.53■■■□□ 2.32
RELA-223ENST00000534283 TRIM34Q9BYJ4 488 aa29.53■■■□□ 2.32
RELA-223ENST00000534283 USP17L10C9JJH3 530 aa29.52■■■□□ 2.32
RELA-223ENST00000534283 INHAP05111 366 aa29.52■■■□□ 2.32
RELA-223ENST00000534283 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.52■■■□□ 2.32
RELA-223ENST00000534283 EHD4Q9H223 541 aa29.52■■■□□ 2.32
RELA-223ENST00000534283 TMOD4Q9NZQ9 345 aa29.52■■■□□ 2.32
RELA-223ENST00000534283 USP5P45974 858 aa29.51■■■□□ 2.31
RELA-223ENST00000534283 CLASRPQ8N2M8 674 aaKnown RBP29.51■■■□□ 2.31
RELA-223ENST00000534283 U2AF1L4Q8WU68 220 aaKnown RBP29.51■■■□□ 2.31
RELA-223ENST00000534283 EMILIN3Q9NT22 766 aa29.51■■■□□ 2.31
RELA-223ENST00000534283 LOC285556D6RIA3 1793 aa29.5■■■□□ 2.31
RELA-223ENST00000534283 GH2P01242 217 aa29.5■■■□□ 2.31
RELA-223ENST00000534283 HMMRO75330 724 aa29.49■■■□□ 2.31
RELA-223ENST00000534283 SGPL1O95470 568 aa29.49■■■□□ 2.31
RELA-223ENST00000534283 PDE6AP16499 860 aa29.49■■■□□ 2.31
RELA-223ENST00000534283 TTF1Q15361 905 aaPredicted RBP29.49■■■□□ 2.31
RELA-223ENST00000534283 POTEEQ6S8J3 1075 aa29.49■■■□□ 2.31
RELA-223ENST00000534283 TXNRD2Q9NNW7 524 aa29.49■■■□□ 2.31
RELA-223ENST00000534283 SERPINB13Q9UIV8 391 aa29.49■■■□□ 2.31
RELA-223ENST00000534283 RCAN3Q9UKA8 241 aa29.49■■■□□ 2.31
RELA-223ENST00000534283 APBB1O00213 710 aa29.48■■■□□ 2.31
RELA-223ENST00000534283 PEX10O60683 326 aa29.48■■■□□ 2.31
RELA-223ENST00000534283 RAB11FIP3O75154 756 aa29.48■■■□□ 2.31
RELA-223ENST00000534283 PLCD1P51178 756 aa29.48■■■□□ 2.31
RELA-223ENST00000534283 IRX3P78415 501 aaPredicted RBP29.48■■■□□ 2.31
RELA-223ENST00000534283 SLC9C2Q5TAH2 1124 aa29.48■■■□□ 2.31
RELA-223ENST00000534283 TTC6Q86TZ1 520 aa29.48■■■□□ 2.31
RELA-223ENST00000534283 PAK6Q9NQU5 681 aaPredicted RBP29.48■■■□□ 2.31
RELA-223ENST00000534283 RBPJLQ9UBG7 517 aa29.48■■■□□ 2.31
RELA-223ENST00000534283 TCRBV5S4A2TA0A5A2 114 aa29.47■■■□□ 2.31
RELA-223ENST00000534283 H0YGN5 161 aa29.47■■■□□ 2.31
RELA-223ENST00000534283 HERVK_113P62684 666 aa29.47■■■□□ 2.31
RELA-223ENST00000534283 MAGEB6P1A0A0J9YX57 407 aa29.46■■■□□ 2.31
RELA-223ENST00000534283 IFIT2P09913 472 aaKnown RBP29.46■■■□□ 2.31
RELA-223ENST00000534283 USP17L2Q6R6M4 530 aa29.46■■■□□ 2.31
RELA-223ENST00000534283 MYO5AQ9Y4I1 1855 aaKnown RBP29.45■■■□□ 2.31
RELA-223ENST00000534283 GOLIM4O00461 696 aa29.45■■■□□ 2.31
RELA-223ENST00000534283 SHMT1P34896 483 aa29.45■■■□□ 2.31
RELA-223ENST00000534283 GABPAQ06546 454 aa29.45■■■□□ 2.31
RELA-223ENST00000534283 C12orf42Q96LP6 360 aa29.45■■■□□ 2.31
RELA-223ENST00000534283 CRISPLD2Q9H0B8 497 aa29.45■■■□□ 2.31
RELA-223ENST00000534283 Q3C1V9 767 aa29.44■■■□□ 2.3
RELA-223ENST00000534283 GPRC5AQ8NFJ5 357 aa29.44■■■□□ 2.3
RELA-223ENST00000534283 EDC3Q96F86 508 aaKnown RBP29.44■■■□□ 2.3
RELA-223ENST00000534283 DEFB118Q96PH6 123 aa29.44■■■□□ 2.3
RELA-223ENST00000534283 PCDH10Q9P2E7 1040 aa29.44■■■□□ 2.3
RELA-223ENST00000534283 TAOK2Q9UL54 1235 aa29.44■■■□□ 2.3
RELA-223ENST00000534283 ZNF532Q9HCE3 1301 aa29.44■■■□□ 2.3
RELA-223ENST00000534283 CAPN2P17655 700 aa29.43■■■□□ 2.3
RELA-223ENST00000534283 EVX2Q03828 476 aa29.43■■■□□ 2.3
RELA-223ENST00000534283 CERKLQ49MI3 558 aaPredicted RBP29.43■■■□□ 2.3
RELA-223ENST00000534283 C20orf194Q5TEA3 1177 aa29.43■■■□□ 2.3
RELA-223ENST00000534283 DNAJC2Q99543 621 aaKnown RBP29.43■■■□□ 2.3
RELA-223ENST00000534283 COLQQ9Y215 455 aaPredicted RBP29.43■■■□□ 2.3
RELA-223ENST00000534283 FOCADQ5VW36 1801 aa29.43■■■□□ 2.3
RELA-223ENST00000534283 MGAMO43451 1857 aa29.42■■■□□ 2.3
RELA-223ENST00000534283 FARP2O94887 1054 aaPredicted RBP29.42■■■□□ 2.3
RELA-223ENST00000534283 GUCY1A2P33402 732 aa29.42■■■□□ 2.3
RELA-223ENST00000534283 ACER1Q8TDN7 264 aa29.42■■■□□ 2.3
RELA-223ENST00000534283 CHMP4BQ9H444 224 aaKnown RBP29.42■■■□□ 2.3
RELA-223ENST00000534283 ATAD5Q96QE3 1844 aa29.41■■■□□ 2.3
RELA-223ENST00000534283 ATP5JP18859 108 aa29.41■■■□□ 2.3
RELA-223ENST00000534283 ABCB5Q2M3G0 1257 aa29.41■■■□□ 2.3
RELA-223ENST00000534283 DPF3Q92784 378 aa29.41■■■□□ 2.3
RELA-223ENST00000534283 CDK5RAP2Q96SN8 1893 aa29.41■■■□□ 2.3
RELA-223ENST00000534283 CRNKL1Q9BZJ0 848 aaKnown RBP29.41■■■□□ 2.3
RELA-223ENST00000534283 KIAA1683Q9H0B3 1180 aa29.41■■■□□ 2.3
RELA-223ENST00000534283 TFRCP02786 760 aaKnown RBP29.4■■■□□ 2.3
RELA-223ENST00000534283 HMGCRP04035 888 aa29.4■■■□□ 2.3
RELA-223ENST00000534283 TRIM32Q13049 653 aa29.4■■■□□ 2.3
RELA-223ENST00000534283 PDE3AQ14432 1141 aa29.4■■■□□ 2.3
RELA-223ENST00000534283 LCORLQ8N3X6 602 aa29.4■■■□□ 2.3
RELA-223ENST00000534283 POLR3DP05423 398 aaPredicted RBP29.39■■■□□ 2.3
RELA-223ENST00000534283 RAB3GAP1Q15042 981 aa29.39■■■□□ 2.3
RELA-223ENST00000534283 SLFNL1Q499Z3 407 aa29.39■■■□□ 2.3
RELA-223ENST00000534283 GTF3C2Q8WUA4 911 aaPredicted RBP29.39■■■□□ 2.3
RELA-223ENST00000534283 USP6NLQ92738 828 aa29.39■■■□□ 2.3
RELA-223ENST00000534283 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.39■■■□□ 2.31e-14■■■■■ 30.6
RELA-223ENST00000534283 BOLA2Q9H3K6 86 aa29.39■■■□□ 2.3
RELA-223ENST00000534283 DCP1AQ9NPI6 582 aaPredicted RBP29.39■■■□□ 2.3
RELA-223ENST00000534283 USP17L15C9J2P7 530 aa29.38■■■□□ 2.29
RELA-223ENST00000534283 USP17L13C9JLJ4 530 aa29.38■■■□□ 2.29
RELA-223ENST00000534283 USP17L11C9JVI0 530 aa29.38■■■□□ 2.29
RELA-223ENST00000534283 USP17L18D6R9N7 530 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms