RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 FOXP2O15409 715 aa16.06■□□□□ 0.16
CMTM1-219ENST00000533953 CETPP11597 493 aa16.06■□□□□ 0.16
CMTM1-219ENST00000533953 SDSP20132 328 aa16.06■□□□□ 0.16
CMTM1-219ENST00000533953 TTC22Q5TAA0 569 aa16.06■□□□□ 0.16
CMTM1-219ENST00000533953 CCDC136Q96JN2 1154 aa16.06■□□□□ 0.16
CMTM1-219ENST00000533953 CA12O43570 354 aa16.05■□□□□ 0.16
CMTM1-219ENST00000533953 CERKLQ49MI3 558 aaPredicted RBP16.05■□□□□ 0.16
CMTM1-219ENST00000533953 ZNF589Q86UQ0 364 aaPredicted RBP16.05■□□□□ 0.16
CMTM1-219ENST00000533953 IFNL3Q8IZI9 196 aa16.05■□□□□ 0.16
CMTM1-219ENST00000533953 SAGE1Q9NXZ1 904 aa16.05■□□□□ 0.16
CMTM1-219ENST00000533953 ZBTB21Q9ULJ3 1066 aa16.05■□□□□ 0.16
CMTM1-219ENST00000533953 USP17L5A8MUK1 530 aa16.04■□□□□ 0.16
CMTM1-219ENST00000533953 CXCL11O14625 94 aa16.04■□□□□ 0.16
CMTM1-219ENST00000533953 TDO2P48775 406 aa16.04■□□□□ 0.16
CMTM1-219ENST00000533953 CDK8P49336 464 aa16.04■□□□□ 0.16
CMTM1-219ENST00000533953 CRHR2Q13324 411 aa16.04■□□□□ 0.16
CMTM1-219ENST00000533953 GPAT2Q6NUI2 795 aa16.04■□□□□ 0.16
CMTM1-219ENST00000533953 GADL1Q6ZQY3 521 aa16.04■□□□□ 0.16
CMTM1-219ENST00000533953 CENPQQ7L2Z9 268 aaPredicted RBP16.04■□□□□ 0.16
CMTM1-219ENST00000533953 DDRGK1Q96HY6 314 aa16.04■□□□□ 0.16
CMTM1-219ENST00000533953 MPHOSPH10O00566 681 aaKnown RBP16.03■□□□□ 0.16
CMTM1-219ENST00000533953 AKR1B1P15121 316 aa16.03■□□□□ 0.16
CMTM1-219ENST00000533953 GUCY1A2P33402 732 aa16.03■□□□□ 0.16
CMTM1-219ENST00000533953 SEPT2Q15019 361 aa16.03■□□□□ 0.16
CMTM1-219ENST00000533953 RAB3GAP1Q15042 981 aa16.03■□□□□ 0.16
CMTM1-219ENST00000533953 ABCB5Q2M3G0 1257 aa16.03■□□□□ 0.16
CMTM1-219ENST00000533953 MCMDC2Q4G0Z9 681 aa16.03■□□□□ 0.16
CMTM1-219ENST00000533953 CWC27Q6UX04 472 aaKnown RBP16.03■□□□□ 0.16
CMTM1-219ENST00000533953 CLEC10AQ8IUN9 316 aa16.03■□□□□ 0.16
CMTM1-219ENST00000533953 ZNF280CQ8ND82 737 aa16.03■□□□□ 0.16
CMTM1-219ENST00000533953 ACER1Q8TDN7 264 aa16.03■□□□□ 0.16
CMTM1-219ENST00000533953 INCENPQ9NQS7 918 aa16.03■□□□□ 0.16
CMTM1-219ENST00000533953 PRDM10Q9NQV6 1147 aa16.03■□□□□ 0.16
CMTM1-219ENST00000533953 HELLSQ9NRZ9 838 aa16.03■□□□□ 0.16
CMTM1-219ENST00000533953 FOCADQ5VW36 1801 aa16.03■□□□□ 0.16
CMTM1-219ENST00000533953 A0A0G2JLL6 359 aaPredicted RBP16.02■□□□□ 0.16
CMTM1-219ENST00000533953 GPR25O00155 361 aa16.02■□□□□ 0.16
CMTM1-219ENST00000533953 PDHXO00330 501 aa16.02■□□□□ 0.16
CMTM1-219ENST00000533953 ECM2O94769 699 aaPredicted RBP16.02■□□□□ 0.16
CMTM1-219ENST00000533953 ASNSP08243 561 aa16.02■□□□□ 0.16
CMTM1-219ENST00000533953 GNAT2P19087 354 aa16.02■□□□□ 0.16
CMTM1-219ENST00000533953 HMGCS2P54868 508 aa16.02■□□□□ 0.16
CMTM1-219ENST00000533953 TAF1CQ15572 869 aaPredicted RBP16.02■□□□□ 0.16
CMTM1-219ENST00000533953 ZYXQ15942 572 aaKnown RBP16.02■□□□□ 0.16
CMTM1-219ENST00000533953 SBK1Q52WX2 424 aa16.02■□□□□ 0.16
CMTM1-219ENST00000533953 OTUD7BQ6GQQ9 843 aa16.02■□□□□ 0.16
CMTM1-219ENST00000533953 PRRT2Q7Z6L0 340 aaPredicted RBP16.02■□□□□ 0.16
CMTM1-219ENST00000533953 ZNF296Q8WUU4 475 aaPredicted RBP16.02■□□□□ 0.16
CMTM1-219ENST00000533953 IL25Q9H293 177 aa16.02■□□□□ 0.16
CMTM1-219ENST00000533953 MYH1P12882 1939 aa16.02■□□□□ 0.15
CMTM1-219ENST00000533953 PRDM1O75626 825 aa16.01■□□□□ 0.15
CMTM1-219ENST00000533953 ALDH1A1P00352 501 aa16.01■□□□□ 0.15
CMTM1-219ENST00000533953 CYP2C8P10632 490 aa16.01■□□□□ 0.15
CMTM1-219ENST00000533953 MTMR2Q13614 643 aa16.01■□□□□ 0.15
CMTM1-219ENST00000533953 TREML2Q5T2D2 321 aa16.01■□□□□ 0.15
CMTM1-219ENST00000533953 GIMAP6Q6P9H5 292 aa16.01■□□□□ 0.15
CMTM1-219ENST00000533953 C16orf86Q6ZW13 317 aa16.01■□□□□ 0.15
CMTM1-219ENST00000533953 AMOTL1Q8IY63 956 aa16.01■□□□□ 0.15
CMTM1-219ENST00000533953 NAPBQ9H115 298 aa16.01■□□□□ 0.15
CMTM1-219ENST00000533953 DIAPH3Q9NSV4 1193 aa16.01■□□□□ 0.15
CMTM1-219ENST00000533953 ARPP21Q9UBL0 812 aaPredicted RBP16.01■□□□□ 0.15
CMTM1-219ENST00000533953 TACC3Q9Y6A5 838 aa16.01■□□□□ 0.15
CMTM1-219ENST00000533953 MYH7P12883 1935 aa16.01■□□□□ 0.15
CMTM1-219ENST00000533953 CAP1Q01518 475 aa16■□□□□ 0.15
CMTM1-219ENST00000533953 CTDSPL2Q05D32 466 aa16■□□□□ 0.15
CMTM1-219ENST00000533953 ANKRD23Q86SG2 305 aa16■□□□□ 0.15
CMTM1-219ENST00000533953 WDR18Q9BV38 432 aa16■□□□□ 0.15
CMTM1-219ENST00000533953 NACAP1Q9BZK3 213 aa16■□□□□ 0.15
CMTM1-219ENST00000533953 CABP5Q9NP86 173 aa16■□□□□ 0.15
CMTM1-219ENST00000533953 SWAP70Q9UH65 585 aa16■□□□□ 0.15
CMTM1-219ENST00000533953 DDX60LQ5H9U9 1706 aaKnown RBP15.99■□□□□ 0.15
CMTM1-219ENST00000533953 NAV1Q8NEY1 1877 aa15.99■□□□□ 0.15
CMTM1-219ENST00000533953 HSPD1P10809 573 aaKnown RBP15.99■□□□□ 0.15
CMTM1-219ENST00000533953 SIAH1Q8IUQ4 282 aa15.99■□□□□ 0.15
CMTM1-219ENST00000533953 AS3MTQ9HBK9 375 aa15.99■□□□□ 0.15
CMTM1-219ENST00000533953 ZFYVE28Q9HCC9 887 aa15.99■□□□□ 0.15
CMTM1-219ENST00000533953 EMILIN3Q9NT22 766 aa15.99■□□□□ 0.15
CMTM1-219ENST00000533953 CPA4Q9UI42 421 aa15.99■□□□□ 0.15
CMTM1-219ENST00000533953 BAZ2AQ9UIF9 1905 aaKnown RBP15.99■□□□□ 0.15
CMTM1-219ENST00000533953 CCDC171Q6TFL3 1326 aa15.98■□□□□ 0.15
CMTM1-219ENST00000533953 A0A1W2PRG0 241 aa15.98■□□□□ 0.15
CMTM1-219ENST00000533953 USP17L10C9JJH3 530 aa15.98■□□□□ 0.15
CMTM1-219ENST00000533953 FGAP02671 866 aa15.98■□□□□ 0.15
CMTM1-219ENST00000533953 RASA1P20936 1047 aa15.98■□□□□ 0.15
CMTM1-219ENST00000533953 BACE1P56817 501 aa15.98■□□□□ 0.15
CMTM1-219ENST00000533953 PPARAQ07869 468 aa15.98■□□□□ 0.15
CMTM1-219ENST00000533953 FASTKD5Q7L8L6 764 aaKnown RBP15.98■□□□□ 0.15
CMTM1-219ENST00000533953 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.98■□□□□ 0.15
CMTM1-219ENST00000533953 CFHR5Q9BXR6 569 aa15.98■□□□□ 0.15
CMTM1-219ENST00000533953 MKNK2Q9HBH9 465 aa15.98■□□□□ 0.15
CMTM1-219ENST00000533953 DOCK1Q14185 1865 aa15.97■□□□□ 0.15
CMTM1-219ENST00000533953 PEX10O60683 326 aa15.97■□□□□ 0.15
CMTM1-219ENST00000533953 FKTNO75072 461 aa15.97■□□□□ 0.15
CMTM1-219ENST00000533953 CHMLP26374 656 aa15.97■□□□□ 0.15
CMTM1-219ENST00000533953 HAND2P61296 217 aa15.97■□□□□ 0.15
CMTM1-219ENST00000533953 SH3D19Q5HYK7 790 aa15.97■□□□□ 0.15
CMTM1-219ENST00000533953 KIAA1755Q5JYT7 1200 aa15.97■□□□□ 0.15
CMTM1-219ENST00000533953 FEZ1Q99689 392 aa15.97■□□□□ 0.15
CMTM1-219ENST00000533953 GINM1Q9NU53 330 aa15.97■□□□□ 0.15
CMTM1-219ENST00000533953 ATP2B2Q01814 1243 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms