RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 BUB1BO60566 1050 aaPredicted RBP7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 NEFHP12036 1026 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 LMOD1P29536 600 aaPredicted RBP7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 KIF5BP33176 963 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 SCNN1DP51172 638 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 GTF2IP78347 998 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 FLAD1Q8NFF5 587 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 NBPF3Q9H094 633 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 DACH1Q9UI36 760 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 PHLPP2Q6ZVD8 1323 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 HSF2BPO75031 334 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 H2AFXP16104 143 aaPredicted RBP7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 TUBB2AQ13885 445 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 ZRSR2Q15696 482 aaKnown RBP7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 PRR5LQ6MZQ0 368 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 C3orf67Q6ZVT6 689 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 KIAA0825Q8IV33 1275 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 SAAL1Q96ER3 474 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 TUBB2BQ9BVA1 445 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 DCTPP1Q9H773 170 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 FAM169AQ9Y6X4 670 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 CPLX1O14810 134 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 CUL4AQ13619 759 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 TTLL12Q14166 644 aaPredicted RBP7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 TTLL11Q8NHH1 800 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 ZNF277Q9NRM2 450 aaPredicted RBP7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 UBN2Q6ZU65 1347 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 RAB11FIP3O75154 756 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 PCCAP05165 728 aaPredicted RBP7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 CHRNDQ07001 517 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 STIM1Q13586 685 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 SNCBQ16143 134 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 RAB11FIP4Q86YS3 637 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 PIK3R5Q8WYR1 880 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 UPF1Q92900 1129 aaKnown RBP eCLIP7.66□□□□□ -1.186e-7■■■■□ 23.7
TGFBR3-209ENST00000532540 AKAP2Q9Y2D5 859 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 ADCY9O60503 1353 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 BCL9O00512 1426 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 MYOM1P52179 1685 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 USP27XA6NNY8 438 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 ARHGAP6O43182 974 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 RPSAP08865 295 aaKnown RBP7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 PDE1AP54750 535 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 AK2P54819 239 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 EAPPQ56P03 285 aaPredicted RBP7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 SWT1Q5T5J6 900 aaKnown RBP7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 TTC19Q6DKK2 380 aaPredicted RBP7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 JMYQ8N9B5 988 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 TMEM87AQ8NBN3 555 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 GGA1Q9UJY5 639 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 NRKQ7Z2Y5 1582 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 COL3A1P02461 1466 aaPredicted RBP7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 PDE6BP35913 854 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 IL15P40933 162 aaPredicted RBP7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 GNGT1P63211 74 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 PRPF40BQ6NWY9 871 aaKnown RBP7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 TMED8Q6PL24 325 aaPredicted RBP7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 NECAB1Q8N987 351 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 EAF2Q96CJ1 260 aaPredicted RBP7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 XAGE2Q96GT9 111 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 PCMTD1Q96MG8 357 aaPredicted RBP7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 TCEANC2Q96MN5 208 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 ECHDC1Q9NTX5 307 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 TNS2Q63HR2 1409 aa7.66□□□□□ -1.18
TGFBR3-209ENST00000532540 GSPT1P15170 499 aaKnown RBP7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 DPEP1P16444 411 aa7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 HNRNPH1P31943 449 aaKnown RBP7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 ZNF569Q5MCW4 686 aa7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 NAIF1Q69YI7 327 aaPredicted RBP7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 SIRT2Q8IXJ6 389 aa7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 RNF217Q8TC41 542 aa7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 BAG1Q99933 345 aaPredicted RBP7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 LZTFL1Q9NQ48 299 aa7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 RNF40O75150 1001 aa7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 RWDD2BP57060 319 aa7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 TCP10Q12799 353 aa7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 E2F5Q15329 346 aa7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 SLC9C2Q5TAH2 1124 aa7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 CCDC129Q6ZRS4 1044 aa7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 AIDAQ96BJ3 306 aa7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 CAPS2Q9BXY5 557 aa7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 ZSCAN16Q9H4T2 348 aaPredicted RBP7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.65□□□□□ -1.18
TGFBR3-209ENST00000532540 NFAT5O94916 1531 aa7.65□□□□□ -1.19
TGFBR3-209ENST00000532540 PLEKHG2Q9H7P9 1386 aa7.65□□□□□ -1.19
TGFBR3-209ENST00000532540 SETD1AO15047 1707 aaKnown RBP7.65□□□□□ -1.19
TGFBR3-209ENST00000532540 GCFC2P16383 781 aaKnown RBP7.65□□□□□ -1.19
TGFBR3-209ENST00000532540 PHKA1P46020 1223 aa7.65□□□□□ -1.19
TGFBR3-209ENST00000532540 CKAP4Q07065 602 aaKnown RBP7.65□□□□□ -1.19
TGFBR3-209ENST00000532540 ARID5BQ14865 1188 aa7.65□□□□□ -1.19
TGFBR3-209ENST00000532540 NBPF9Q3BBW0 867 aa7.65□□□□□ -1.19
TGFBR3-209ENST00000532540 GRIPAP1Q4V328 841 aa7.65□□□□□ -1.19
TGFBR3-209ENST00000532540 FBXW10Q5XX13 1052 aa7.65□□□□□ -1.19
TGFBR3-209ENST00000532540 CPLX2Q6PUV4 134 aaKnown RBP7.65□□□□□ -1.19
TGFBR3-209ENST00000532540 BAIAP2L1Q9UHR4 511 aa7.65□□□□□ -1.19
TGFBR3-209ENST00000532540 ABCC4O15439 1325 aa7.65□□□□□ -1.19
TGFBR3-209ENST00000532540 ADGRB2O60241 1585 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 NWD1Q149M9 1564 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 GOLGA6BA6NDN3 693 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 USP5P45974 858 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms