RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 TMED8Q6PL24 325 aaPredicted RBP19.33■□□□□ 0.69
VPS26B-206ENST00000531741 NUP133Q8WUM0 1156 aa19.33■□□□□ 0.69
VPS26B-206ENST00000531741 RBM28Q9NW13 759 aaKnown RBP19.33■□□□□ 0.69
VPS26B-206ENST00000531741 PRPF3O43395 683 aaKnown RBP19.32■□□□□ 0.68
VPS26B-206ENST00000531741 CALM1P0DP23 149 aa19.32■□□□□ 0.68
VPS26B-206ENST00000531741 CALM2P0DP24 149 aa19.32■□□□□ 0.68
VPS26B-206ENST00000531741 CALM3P0DP25 149 aa19.32■□□□□ 0.68
VPS26B-206ENST00000531741 POSTNQ15063 836 aa19.32■□□□□ 0.68
VPS26B-206ENST00000531741 ENAHQ8N8S7 591 aaPredicted RBP19.32■□□□□ 0.68
VPS26B-206ENST00000531741 KIF18AQ8NI77 898 aa19.32■□□□□ 0.68
VPS26B-206ENST00000531741 MINPP1Q9UNW1 487 aa19.32■□□□□ 0.68
VPS26B-206ENST00000531741 PCDHB6Q9Y5E3 794 aa19.32■□□□□ 0.68
VPS26B-206ENST00000531741 A0A0G2JS52 829 aa19.32■□□□□ 0.68
VPS26B-206ENST00000531741 BMP6P22004 513 aa19.32■□□□□ 0.68
VPS26B-206ENST00000531741 NR5A1Q13285 461 aa19.32■□□□□ 0.68
VPS26B-206ENST00000531741 MLKLQ8NB16 471 aa19.32■□□□□ 0.68
VPS26B-206ENST00000531741 FAM84BQ96KN1 310 aaPredicted RBP19.32■□□□□ 0.68
VPS26B-206ENST00000531741 DACH1Q9UI36 760 aa19.32■□□□□ 0.68
VPS26B-206ENST00000531741 CCP110O43303 1012 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 AKAP17AQ02040 695 aaKnown RBP19.31■□□□□ 0.68
VPS26B-206ENST00000531741 FBXO33Q7Z6M2 555 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 VSTM4Q8IW00 320 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 PHF20Q9BVI0 1012 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 TRMT1Q9NXH9 659 aaKnown RBP19.31■□□□□ 0.68
VPS26B-206ENST00000531741 MAN1B1Q9UKM7 699 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 IQSEC3Q9UPP2 1182 aaPredicted RBP19.31■□□□□ 0.68
VPS26B-206ENST00000531741 MYH2Q9UKX2 1941 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 ADAMTS2O95450 1211 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 BMP15O95972 392 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 SERPINC1P01008 464 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 PKN1Q16512 942 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 CT47A1Q5JQC4 288 aaPredicted RBP19.31■□□□□ 0.68
VPS26B-206ENST00000531741 C3orf67Q6ZVT6 689 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 CATIPQ7Z7H3 387 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 IQCA1Q86XH1 822 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 SPATA20Q8TB22 786 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 PPP1R13BQ96KQ4 1090 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 TMX1Q9H3N1 280 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 TAOK2Q9UL54 1235 aa19.31■□□□□ 0.68
VPS26B-206ENST00000531741 POLR2DO15514 142 aaKnown RBP19.3■□□□□ 0.68
VPS26B-206ENST00000531741 DDAH1O94760 285 aa19.3■□□□□ 0.68
VPS26B-206ENST00000531741 GRIN1Q05586 938 aa19.3■□□□□ 0.68
VPS26B-206ENST00000531741 MORC3Q14149 939 aa19.3■□□□□ 0.68
VPS26B-206ENST00000531741 CMTR1Q8N1G2 835 aaKnown RBP19.3■□□□□ 0.68
VPS26B-206ENST00000531741 CCDC82Q8N4S0 544 aa19.3■□□□□ 0.68
VPS26B-206ENST00000531741 OXER1Q8TDS5 423 aa19.3■□□□□ 0.68
VPS26B-206ENST00000531741 ZNF592Q92610 1267 aa19.3■□□□□ 0.68
VPS26B-206ENST00000531741 AATFQ9NY61 560 aaKnown RBP eCLIP19.3■□□□□ 0.68
VPS26B-206ENST00000531741 CNTNAP4Q9C0A0 1308 aa19.3■□□□□ 0.68
VPS26B-206ENST00000531741 BAZ2AQ9UIF9 1905 aaKnown RBP19.3■□□□□ 0.68
VPS26B-206ENST00000531741 ACTN4O43707 911 aaKnown RBP19.29■□□□□ 0.68
VPS26B-206ENST00000531741 TROAPQ12815 778 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 PPP4R3BQ5MIZ7 849 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 IFIT1BQ5T764 474 aaKnown RBP19.29■□□□□ 0.68
VPS26B-206ENST00000531741 ENOX1Q8TC92 643 aaKnown RBP19.29■□□□□ 0.68
VPS26B-206ENST00000531741 ZNF384Q8TF68 577 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 CABP5Q9NP86 173 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 FANCLQ9NW38 375 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 LAMB1P07942 1786 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 TRIM75PA6NK02 468 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 FOXN1O15353 648 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 ORC4O43929 436 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 KRT2P35908 639 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 CFAP100Q494V2 611 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 SPECC1Q5M775 1068 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 LINC00116Q8NCU8 138 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 DPF2Q92785 391 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 SMARCE1Q969G3 411 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 SHISA4Q96DD7 197 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 CCDC34Q96HJ3 373 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 SERTAD1Q9UHV2 236 aa19.29■□□□□ 0.68
VPS26B-206ENST00000531741 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.29■□□□□ 0.68
VPS26B-206ENST00000531741 MAST2Q6P0Q8 1798 aa19.28■□□□□ 0.68
VPS26B-206ENST00000531741 TAF1P21675 1872 aa19.28■□□□□ 0.68
VPS26B-206ENST00000531741 ZNF18P17022 549 aa19.28■□□□□ 0.68
VPS26B-206ENST00000531741 PDE4BQ07343 736 aa19.28■□□□□ 0.68
VPS26B-206ENST00000531741 CTR9Q6PD62 1173 aa19.28■□□□□ 0.68
VPS26B-206ENST00000531741 FCHSD1Q86WN1 690 aa19.28■□□□□ 0.68
VPS26B-206ENST00000531741 CGNQ9P2M7 1197 aaKnown RBP19.28■□□□□ 0.68
VPS26B-206ENST00000531741 COL24A1Q17RW2 1714 aa19.28■□□□□ 0.68
VPS26B-206ENST00000531741 MYH13Q9UKX3 1938 aa19.28■□□□□ 0.68
VPS26B-206ENST00000531741 DYNLL1P63167 89 aaKnown RBP19.28■□□□□ 0.68
VPS26B-206ENST00000531741 FERMT2Q96AC1 680 aa19.28■□□□□ 0.68
VPS26B-206ENST00000531741 NSUN4Q96CB9 384 aaKnown RBP19.28■□□□□ 0.68
VPS26B-206ENST00000531741 ERO1AQ96HE7 468 aa19.28■□□□□ 0.68
VPS26B-206ENST00000531741 FEZ1Q99689 392 aa19.28■□□□□ 0.68
VPS26B-206ENST00000531741 NYXQ9GZU5 481 aa19.28■□□□□ 0.68
VPS26B-206ENST00000531741 L2HGDHQ9H9P8 463 aa19.28■□□□□ 0.68
VPS26B-206ENST00000531741 KCNQ2O43526 872 aa19.27■□□□□ 0.68
VPS26B-206ENST00000531741 NT5C2P49902 561 aa19.27■□□□□ 0.68
VPS26B-206ENST00000531741 SMAP1Q8IYB5 467 aaPredicted RBP19.27■□□□□ 0.68
VPS26B-206ENST00000531741 CSRNP2Q9H175 543 aa19.27■□□□□ 0.68
VPS26B-206ENST00000531741 IGSF3O75054 1194 aa19.26■□□□□ 0.67
VPS26B-206ENST00000531741 TOP1P11387 765 aaKnown RBP19.26■□□□□ 0.67
VPS26B-206ENST00000531741 ERCC5P28715 1186 aaPredicted RBP19.26■□□□□ 0.67
VPS26B-206ENST00000531741 TMTC3Q6ZXV5 915 aa19.26■□□□□ 0.67
VPS26B-206ENST00000531741 CELF1Q92879 486 aaKnown RBP19.26■□□□□ 0.67
VPS26B-206ENST00000531741 BRMS1Q9HCU9 246 aa19.26■□□□□ 0.67
VPS26B-206ENST00000531741 ATP8A2Q9NTI2 1148 aa19.26■□□□□ 0.67
VPS26B-206ENST00000531741 VPS54Q9P1Q0 977 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms