RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 CRACR2AQ9BSW2 395 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 KCNF1Q9H3M0 494 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 ARFGAP3Q9NP61 516 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 GUCY1A2P33402 732 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 ST3GAL1Q11201 340 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 PTGDRQ13258 359 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 SLC39A14Q15043 492 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 ERFEQ4G0M1 354 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 ATL3Q6DD88 541 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 ZNF397Q8NF99 534 aaPredicted RBP13.99□□□□□ -0.17
SCN3B-206ENST00000530277 OXER1Q8TDS5 423 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 ZNF287Q9HBT7 754 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 AKR1B15C9JRZ8 316 aaPredicted RBP13.99□□□□□ -0.17
SCN3B-206ENST00000530277 KRT9P35527 623 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 INF2Q27J81 1249 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 KRBA2Q6ZNG9 492 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 DYNLL2Q96FJ2 89 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 EPC1Q9H2F5 836 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 SOS2Q07890 1332 aaPredicted RBP13.99□□□□□ -0.17
SCN3B-206ENST00000530277 SYNRGQ9UMZ2 1314 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 TMEM232C9JQI7 657 aa13.98□□□□□ -0.17
SCN3B-206ENST00000530277 PSMA7O14818 248 aa13.98□□□□□ -0.17
SCN3B-206ENST00000530277 LDHCP07864 332 aa13.98□□□□□ -0.17
SCN3B-206ENST00000530277 USP8P40818 1118 aa13.98□□□□□ -0.17
SCN3B-206ENST00000530277 NOP2P46087 812 aaKnown RBP13.98□□□□□ -0.17
SCN3B-206ENST00000530277 TMEM87AQ8NBN3 555 aa13.98□□□□□ -0.17
SCN3B-206ENST00000530277 MROH5Q6ZUA9 1318 aa13.98□□□□□ -0.17
SCN3B-206ENST00000530277 ZBTB22O15209 634 aa13.98□□□□□ -0.17
SCN3B-206ENST00000530277 CCNT1O60563 726 aaKnown RBP13.98□□□□□ -0.17
SCN3B-206ENST00000530277 CYP2D6P10635 497 aa13.98□□□□□ -0.17
SCN3B-206ENST00000530277 TMEM266Q2M3C6 531 aa13.98□□□□□ -0.17
SCN3B-206ENST00000530277 FAM107BQ9H098 131 aa13.98□□□□□ -0.17
SCN3B-206ENST00000530277 SPATA31A3Q5VYP0 1347 aa13.98□□□□□ -0.17
SCN3B-206ENST00000530277 PLS1Q14651 629 aa13.98□□□□□ -0.17
SCN3B-206ENST00000530277 STRBPQ96SI9 672 aaKnown RBP13.98□□□□□ -0.17
SCN3B-206ENST00000530277 PKD2L1Q9P0L9 805 aa13.98□□□□□ -0.17
SCN3B-206ENST00000530277 PLEKHA8P1O95397 391 aa13.98□□□□□ -0.17
SCN3B-206ENST00000530277 SYMPKQ92797 1274 aaKnown RBP13.98□□□□□ -0.17
SCN3B-206ENST00000530277 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.98□□□□□ -0.17
SCN3B-206ENST00000530277 FAM205CA6NFA0 338 aa13.97□□□□□ -0.17
SCN3B-206ENST00000530277 ANKARQ7Z5J8 1434 aa13.97□□□□□ -0.17
SCN3B-206ENST00000530277 TMCO5BA8MYB1 307 aa13.97□□□□□ -0.17
SCN3B-206ENST00000530277 CTDNEP1O95476 244 aa13.97□□□□□ -0.17
SCN3B-206ENST00000530277 USP17L8P0C7I0 530 aa13.97□□□□□ -0.17
SCN3B-206ENST00000530277 RFX5P48382 616 aaPredicted RBP13.97□□□□□ -0.17
SCN3B-206ENST00000530277 PRPF4BQ13523 1007 aaKnown RBP13.97□□□□□ -0.17
SCN3B-206ENST00000530277 ZYXQ15942 572 aaKnown RBP13.97□□□□□ -0.17
SCN3B-206ENST00000530277 CNBD1Q8NA66 436 aa13.97□□□□□ -0.17
SCN3B-206ENST00000530277 RTL9Q8NET4 1388 aa13.97□□□□□ -0.17
SCN3B-206ENST00000530277 FRMPD2Q68DX3 1309 aaPredicted RBP13.97□□□□□ -0.17
SCN3B-206ENST00000530277 SH2B2O14492 632 aaPredicted RBP13.97□□□□□ -0.17
SCN3B-206ENST00000530277 PPP2R3AQ06190 1150 aa13.97□□□□□ -0.17
SCN3B-206ENST00000530277 PDE4DQ08499 809 aa13.97□□□□□ -0.17
SCN3B-206ENST00000530277 UBE3CQ15386 1083 aa13.97□□□□□ -0.17
SCN3B-206ENST00000530277 ZSCAN10Q96SZ4 725 aaPredicted RBP13.97□□□□□ -0.17
SCN3B-206ENST00000530277 TSPYL1Q9H0U9 437 aa13.97□□□□□ -0.17
SCN3B-206ENST00000530277 TMEM131LA2VDJ0 1609 aa13.97□□□□□ -0.17
SCN3B-206ENST00000530277 EIF3JO75822 258 aaKnown RBP13.96□□□□□ -0.17
SCN3B-206ENST00000530277 CALM1P0DP23 149 aa13.96□□□□□ -0.17
SCN3B-206ENST00000530277 CALM2P0DP24 149 aa13.96□□□□□ -0.17
SCN3B-206ENST00000530277 CALM3P0DP25 149 aa13.96□□□□□ -0.17
SCN3B-206ENST00000530277 PARP10Q53GL7 1025 aa13.96□□□□□ -0.17
SCN3B-206ENST00000530277 SRRTQ9BXP5 876 aaKnown RBP13.96□□□□□ -0.17
SCN3B-206ENST00000530277 ZC3H12CQ9C0D7 883 aaKnown RBP13.96□□□□□ -0.17
SCN3B-206ENST00000530277 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.96□□□□□ -0.17
SCN3B-206ENST00000530277 BIN2Q9UBW5 565 aaPredicted RBP13.96□□□□□ -0.17
SCN3B-206ENST00000530277 CEMIPQ8WUJ3 1361 aa13.96□□□□□ -0.17
SCN3B-206ENST00000530277 H0YHG0 523 aa13.96□□□□□ -0.17
SCN3B-206ENST00000530277 WDHD1O75717 1129 aaPredicted RBP13.96□□□□□ -0.17
SCN3B-206ENST00000530277 CIAO1O76071 339 aa13.96□□□□□ -0.17
SCN3B-206ENST00000530277 PRDX5P30044 214 aa13.96□□□□□ -0.17
SCN3B-206ENST00000530277 TBC1D8BQ0IIM8 1120 aa13.96□□□□□ -0.17
SCN3B-206ENST00000530277 MRFAP1L1Q96HT8 127 aa13.96□□□□□ -0.17
SCN3B-206ENST00000530277 LUC7L2Q9Y383 392 aaKnown RBP13.96□□□□□ -0.17
SCN3B-206ENST00000530277 PREX1Q8TCU6 1659 aa13.96□□□□□ -0.17
SCN3B-206ENST00000530277 ARID4AP29374 1257 aaPredicted RBP13.96□□□□□ -0.18
SCN3B-206ENST00000530277 SCNN1DP51172 638 aa13.96□□□□□ -0.18
SCN3B-206ENST00000530277 HLTFQ14527 1009 aaKnown RBP eCLIP13.96□□□□□ -0.18
SCN3B-206ENST00000530277 CCDC122Q5T0U0 273 aa13.96□□□□□ -0.18
SCN3B-206ENST00000530277 CERS3Q8IU89 383 aa13.96□□□□□ -0.18
SCN3B-206ENST00000530277 ERO1AQ96HE7 468 aa13.96□□□□□ -0.18
SCN3B-206ENST00000530277 SHPRHQ149N8 1683 aa13.96□□□□□ -0.18
SCN3B-206ENST00000530277 LMTK3Q96Q04 1460 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 USP49Q70CQ1 688 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 LRRC47Q8N1G4 583 aaKnown RBP13.95□□□□□ -0.18
SCN3B-206ENST00000530277 BCCIPQ9P287 314 aaKnown RBP eCLIP13.95□□□□□ -0.18
SCN3B-206ENST00000530277 DEPDC5O75140 1603 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 CTAGE15A4D2H0 777 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 CTAGE9A4FU28 777 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 SEC31AO94979 1220 aaKnown RBP13.95□□□□□ -0.18
SCN3B-206ENST00000530277 CTAGE8P0CG41 777 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 SPECC1LQ69YQ0 1117 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 CTAGE6Q86UF2 777 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 CTAGE4Q8IX94 777 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 ANKRD13CQ8N6S4 541 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 SLC44A5Q8NCS7 719 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 SMARCC1Q92922 1105 aaPredicted RBP13.95□□□□□ -0.18
SCN3B-206ENST00000530277 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.95□□□□□ -0.18
SCN3B-206ENST00000530277 ODF2Q5BJF6 829 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 FCHSD1Q86WN1 690 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms