RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 GDF11O95390 407 aa19.36■□□□□ 0.69
TSPAN4-218ENST00000529566 ASNSP08243 561 aa19.36■□□□□ 0.69
TSPAN4-218ENST00000529566 GPAT2Q6NUI2 795 aa19.36■□□□□ 0.69
TSPAN4-218ENST00000529566 EPB41L4AQ9HCS5 686 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-218ENST00000529566 ZBTB21Q9ULJ3 1066 aa19.36■□□□□ 0.69
TSPAN4-218ENST00000529566 CASP8AP2Q9UKL3 1982 aa19.35■□□□□ 0.69
TSPAN4-218ENST00000529566 USP17L5A8MUK1 530 aa19.35■□□□□ 0.69
TSPAN4-218ENST00000529566 PATL2C9JE40 543 aaKnown RBP19.35■□□□□ 0.69
TSPAN4-218ENST00000529566 FOXP2O15409 715 aa19.35■□□□□ 0.69
TSPAN4-218ENST00000529566 GNAT2P19087 354 aa19.35■□□□□ 0.69
TSPAN4-218ENST00000529566 CRHR2Q13324 411 aa19.35■□□□□ 0.69
TSPAN4-218ENST00000529566 ANKRD23Q86SG2 305 aa19.35■□□□□ 0.69
TSPAN4-218ENST00000529566 ZNF280CQ8ND82 737 aa19.35■□□□□ 0.69
TSPAN4-218ENST00000529566 DYNLL2Q96FJ2 89 aa19.35■□□□□ 0.69
TSPAN4-218ENST00000529566 WDR18Q9BV38 432 aa19.35■□□□□ 0.69
TSPAN4-218ENST00000529566 ZCCHC17Q9NP64 241 aaKnown RBP19.35■□□□□ 0.69
TSPAN4-218ENST00000529566 TAOK2Q9UL54 1235 aa19.35■□□□□ 0.69
TSPAN4-218ENST00000529566 ATAD5Q96QE3 1844 aa19.35■□□□□ 0.69
TSPAN4-218ENST00000529566 TRIM75PA6NK02 468 aa19.34■□□□□ 0.69
TSPAN4-218ENST00000529566 TRIM6-TRIM34B2RNG4 842 aa19.34■□□□□ 0.69
TSPAN4-218ENST00000529566 GPR25O00155 361 aa19.34■□□□□ 0.69
TSPAN4-218ENST00000529566 GH2P01242 217 aa19.34■□□□□ 0.69
TSPAN4-218ENST00000529566 SPP2Q13103 211 aa19.34■□□□□ 0.69
TSPAN4-218ENST00000529566 CERKLQ49MI3 558 aaPredicted RBP19.34■□□□□ 0.69
TSPAN4-218ENST00000529566 SBK1Q52WX2 424 aa19.34■□□□□ 0.69
TSPAN4-218ENST00000529566 SLC44A5Q8NCS7 719 aa19.34■□□□□ 0.69
TSPAN4-218ENST00000529566 RILPL2Q969X0 211 aa19.34■□□□□ 0.69
TSPAN4-218ENST00000529566 FAM227BQ96M60 508 aa19.34■□□□□ 0.69
TSPAN4-218ENST00000529566 TBC1D2Q9BYX2 928 aa19.34■□□□□ 0.69
TSPAN4-218ENST00000529566 HELLSQ9NRZ9 838 aa19.34■□□□□ 0.69
TSPAN4-218ENST00000529566 A0A0D9SFI3 127 aa19.33■□□□□ 0.68
TSPAN4-218ENST00000529566 GUCY1A2P33402 732 aa19.33■□□□□ 0.68
TSPAN4-218ENST00000529566 CCDC129Q6ZRS4 1044 aa19.33■□□□□ 0.68
TSPAN4-218ENST00000529566 ZNF296Q8WUU4 475 aaPredicted RBP19.33■□□□□ 0.68
TSPAN4-218ENST00000529566 DDRGK1Q96HY6 314 aa19.33■□□□□ 0.68
TSPAN4-218ENST00000529566 SWAP70Q9UH65 585 aa19.33■□□□□ 0.68
TSPAN4-218ENST00000529566 PTPRFP10586 1907 aa19.33■□□□□ 0.68
TSPAN4-218ENST00000529566 GSPT1P15170 499 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-218ENST00000529566 SDSP20132 328 aa19.32■□□□□ 0.68
TSPAN4-218ENST00000529566 ABCB5Q2M3G0 1257 aa19.32■□□□□ 0.68
TSPAN4-218ENST00000529566 SH3D19Q5HYK7 790 aa19.32■□□□□ 0.68
TSPAN4-218ENST00000529566 C16orf86Q6ZW13 317 aa19.32■□□□□ 0.68
TSPAN4-218ENST00000529566 FASTKD5Q7L8L6 764 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-218ENST00000529566 IFNL3Q8IZI9 196 aa19.32■□□□□ 0.68
TSPAN4-218ENST00000529566 ARPP21Q9UBL0 812 aaPredicted RBP19.32■□□□□ 0.68
TSPAN4-218ENST00000529566 PDHXO00330 501 aa19.31■□□□□ 0.68
TSPAN4-218ENST00000529566 CDK8P49336 464 aa19.31■□□□□ 0.68
TSPAN4-218ENST00000529566 NMIQ13287 307 aaPredicted RBP19.31■□□□□ 0.68
TSPAN4-218ENST00000529566 TAF1CQ15572 869 aaPredicted RBP19.31■□□□□ 0.68
TSPAN4-218ENST00000529566 MCMDC2Q4G0Z9 681 aa19.31■□□□□ 0.68
TSPAN4-218ENST00000529566 TTC22Q5TAA0 569 aa19.31■□□□□ 0.68
TSPAN4-218ENST00000529566 APPP05067 770 aa19.3■□□□□ 0.68
TSPAN4-218ENST00000529566 BACE1P56817 501 aa19.3■□□□□ 0.68
TSPAN4-218ENST00000529566 DGKZQ13574 1117 aa19.3■□□□□ 0.68
TSPAN4-218ENST00000529566 VPS53Q5VIR6 699 aa19.3■□□□□ 0.68
TSPAN4-218ENST00000529566 CENPQQ7L2Z9 268 aaPredicted RBP19.3■□□□□ 0.68
TSPAN4-218ENST00000529566 AS3MTQ9HBK9 375 aa19.3■□□□□ 0.68
TSPAN4-218ENST00000529566 ZFYVE28Q9HCC9 887 aa19.3■□□□□ 0.68
TSPAN4-218ENST00000529566 SLC45A1Q9Y2W3 748 aa19.3■□□□□ 0.68
TSPAN4-218ENST00000529566 TLR2O60603 784 aa19.29■□□□□ 0.68
TSPAN4-218ENST00000529566 FKTNO75072 461 aa19.29■□□□□ 0.68
TSPAN4-218ENST00000529566 HMGCS2P54868 508 aa19.29■□□□□ 0.68
TSPAN4-218ENST00000529566 MTMR2Q13614 643 aa19.29■□□□□ 0.68
TSPAN4-218ENST00000529566 TREML2Q5T2D2 321 aa19.29■□□□□ 0.68
TSPAN4-218ENST00000529566 GADL1Q6ZQY3 521 aa19.29■□□□□ 0.68
TSPAN4-218ENST00000529566 ZNF589Q86UQ0 364 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-218ENST00000529566 AMOTL1Q8IY63 956 aa19.29■□□□□ 0.68
TSPAN4-218ENST00000529566 PROCA1Q8NCQ7 364 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-218ENST00000529566 ROBO3Q96MS0 1386 aa19.29■□□□□ 0.68
TSPAN4-218ENST00000529566 ADGRA2Q96PE1 1338 aa19.28■□□□□ 0.68
TSPAN4-218ENST00000529566 AKR1B1P15121 316 aa19.28■□□□□ 0.68
TSPAN4-218ENST00000529566 TDO2P48775 406 aa19.28■□□□□ 0.68
TSPAN4-218ENST00000529566 SEPT2Q15019 361 aa19.28■□□□□ 0.68
TSPAN4-218ENST00000529566 RAB3GAP1Q15042 981 aa19.28■□□□□ 0.68
TSPAN4-218ENST00000529566 NACAP1Q9BZK3 213 aa19.28■□□□□ 0.68
TSPAN4-218ENST00000529566 AGTPBP1Q9UPW5 1226 aa19.28■□□□□ 0.68
TSPAN4-218ENST00000529566 MINDY4BA8MYZ0 360 aa19.27■□□□□ 0.68
TSPAN4-218ENST00000529566 C19orf81C9J6K1 198 aa19.27■□□□□ 0.68
TSPAN4-218ENST00000529566 USP17L10C9JJH3 530 aa19.27■□□□□ 0.68
TSPAN4-218ENST00000529566 CAP1Q01518 475 aa19.27■□□□□ 0.68
TSPAN4-218ENST00000529566 ALX1Q15699 326 aa19.27■□□□□ 0.68
TSPAN4-218ENST00000529566 C17orf99Q6UX52 265 aa19.27■□□□□ 0.68
TSPAN4-218ENST00000529566 SIAH1Q8IUQ4 282 aa19.27■□□□□ 0.68
TSPAN4-218ENST00000529566 TNS4Q8IZW8 715 aa19.27■□□□□ 0.68
TSPAN4-218ENST00000529566 ACER1Q8TDN7 264 aa19.27■□□□□ 0.68
TSPAN4-218ENST00000529566 CCDC17Q96LX7 622 aa19.27■□□□□ 0.68
TSPAN4-218ENST00000529566 CABP5Q9NP86 173 aa19.27■□□□□ 0.68
TSPAN4-218ENST00000529566 EMILIN3Q9NT22 766 aa19.27■□□□□ 0.68
TSPAN4-218ENST00000529566 CYP2C8P10632 490 aa19.26■□□□□ 0.67
TSPAN4-218ENST00000529566 TMEM179Q6ZVK1 233 aa19.26■□□□□ 0.67
TSPAN4-218ENST00000529566 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.26■□□□□ 0.67
TSPAN4-218ENST00000529566 LOC285556D6RIA3 1793 aa19.26■□□□□ 0.67
TSPAN4-218ENST00000529566 CENPBP07199 599 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-218ENST00000529566 HSPD1P10809 573 aaKnown RBP19.25■□□□□ 0.67
TSPAN4-218ENST00000529566 RASA1P20936 1047 aa19.25■□□□□ 0.67
TSPAN4-218ENST00000529566 SP3Q02447 781 aa19.25■□□□□ 0.67
TSPAN4-218ENST00000529566 SKAP1Q86WV1 359 aa19.25■□□□□ 0.67
TSPAN4-218ENST00000529566 KIAA1683Q9H0B3 1180 aa19.25■□□□□ 0.67
TSPAN4-218ENST00000529566 NAPBQ9H115 298 aa19.25■□□□□ 0.67
TSPAN4-218ENST00000529566 CCDC171Q6TFL3 1326 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms