RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 TAF1CQ15572 869 aaPredicted RBP20.23■□□□□ 0.83
HIF3A-211ENST00000528563 SHROOM1Q2M3G4 852 aaPredicted RBP20.23■□□□□ 0.83
HIF3A-211ENST00000528563 C12orf60Q5U649 245 aa20.23■□□□□ 0.83
HIF3A-211ENST00000528563 GPAT2Q6NUI2 795 aa20.23■□□□□ 0.83
HIF3A-211ENST00000528563 FASTKD5Q7L8L6 764 aaKnown RBP20.23■□□□□ 0.83
HIF3A-211ENST00000528563 TICAM2Q86XR7 235 aa20.23■□□□□ 0.83
HIF3A-211ENST00000528563 ZNF280CQ8ND82 737 aa20.23■□□□□ 0.83
HIF3A-211ENST00000528563 WDR18Q9BV38 432 aa20.23■□□□□ 0.83
HIF3A-211ENST00000528563 TAOK2Q9UL54 1235 aa20.23■□□□□ 0.83
HIF3A-211ENST00000528563 GPAA1O43292 621 aa20.22■□□□□ 0.83
HIF3A-211ENST00000528563 FKTNO75072 461 aa20.22■□□□□ 0.83
HIF3A-211ENST00000528563 GDF11O95390 407 aa20.22■□□□□ 0.83
HIF3A-211ENST00000528563 GIMAP6Q6P9H5 292 aa20.22■□□□□ 0.83
HIF3A-211ENST00000528563 CTR9Q6PD62 1173 aa20.22■□□□□ 0.83
HIF3A-211ENST00000528563 DDRGK1Q96HY6 314 aa20.22■□□□□ 0.83
HIF3A-211ENST00000528563 SEC62Q99442 399 aaKnown RBP20.22■□□□□ 0.83
HIF3A-211ENST00000528563 ZFYVE28Q9HCC9 887 aa20.22■□□□□ 0.83
HIF3A-211ENST00000528563 PDHXO00330 501 aa20.21■□□□□ 0.83
HIF3A-211ENST00000528563 CERKLQ49MI3 558 aaPredicted RBP20.21■□□□□ 0.83
HIF3A-211ENST00000528563 ZBTB21Q9ULJ3 1066 aa20.21■□□□□ 0.83
HIF3A-211ENST00000528563 CYP2D7A0A087X1C5 515 aa20.2■□□□□ 0.82
HIF3A-211ENST00000528563 SMIM22K7EJ46 135 aa20.2■□□□□ 0.82
HIF3A-211ENST00000528563 GH2P01242 217 aa20.2■□□□□ 0.82
HIF3A-211ENST00000528563 GNAT2P19087 354 aa20.2■□□□□ 0.82
HIF3A-211ENST00000528563 DYNLL2Q96FJ2 89 aa20.2■□□□□ 0.82
HIF3A-211ENST00000528563 AS3MTQ9HBK9 375 aa20.2■□□□□ 0.82
HIF3A-211ENST00000528563 NAV1Q8NEY1 1877 aa20.2■□□□□ 0.82
HIF3A-211ENST00000528563 ATAD5Q96QE3 1844 aa20.19■□□□□ 0.82
HIF3A-211ENST00000528563 PATL2C9JE40 543 aaKnown RBP20.19■□□□□ 0.82
HIF3A-211ENST00000528563 TLR2O60603 784 aa20.19■□□□□ 0.82
HIF3A-211ENST00000528563 SBK1Q52WX2 424 aa20.19■□□□□ 0.82
HIF3A-211ENST00000528563 SH3D19Q5HYK7 790 aa20.19■□□□□ 0.82
HIF3A-211ENST00000528563 BAZ2AQ9UIF9 1905 aaKnown RBP20.19■□□□□ 0.82
HIF3A-211ENST00000528563 PDE4AP27815 886 aa20.18■□□□□ 0.82
HIF3A-211ENST00000528563 ABCB5Q2M3G0 1257 aa20.18■□□□□ 0.82
HIF3A-211ENST00000528563 GADL1Q6ZQY3 521 aa20.18■□□□□ 0.82
HIF3A-211ENST00000528563 SWAP70Q9UH65 585 aa20.18■□□□□ 0.82
HIF3A-211ENST00000528563 SLC45A1Q9Y2W3 748 aa20.18■□□□□ 0.82
HIF3A-211ENST00000528563 PTPRFP10586 1907 aa20.18■□□□□ 0.82
HIF3A-211ENST00000528563 TRIM6-TRIM34B2RNG4 842 aa20.18■□□□□ 0.82
HIF3A-211ENST00000528563 BACE1P56817 501 aa20.18■□□□□ 0.82
HIF3A-211ENST00000528563 DGKZQ13574 1117 aa20.18■□□□□ 0.82
HIF3A-211ENST00000528563 CTU1Q7Z7A3 348 aaKnown RBP20.18■□□□□ 0.82
HIF3A-211ENST00000528563 AMOTL1Q8IY63 956 aa20.18■□□□□ 0.82
HIF3A-211ENST00000528563 PROCA1Q8NCQ7 364 aaPredicted RBP20.18■□□□□ 0.82
HIF3A-211ENST00000528563 SLC44A5Q8NCS7 719 aa20.18■□□□□ 0.82
HIF3A-211ENST00000528563 C19orf81C9J6K1 198 aa20.17■□□□□ 0.82
HIF3A-211ENST00000528563 GUCY1A2P33402 732 aa20.17■□□□□ 0.82
HIF3A-211ENST00000528563 CDK8P49336 464 aa20.17■□□□□ 0.82
HIF3A-211ENST00000528563 HMGCS2P54868 508 aa20.17■□□□□ 0.82
HIF3A-211ENST00000528563 SP3Q02447 781 aa20.17■□□□□ 0.82
HIF3A-211ENST00000528563 MCOLN1Q9GZU1 580 aa20.17■□□□□ 0.82
HIF3A-211ENST00000528563 EPB41L4AQ9HCS5 686 aaPredicted RBP20.17■□□□□ 0.82
HIF3A-211ENST00000528563 CABP5Q9NP86 173 aa20.17■□□□□ 0.82
HIF3A-211ENST00000528563 HELLSQ9NRZ9 838 aa20.17■□□□□ 0.82
HIF3A-211ENST00000528563 ARPP21Q9UBL0 812 aaPredicted RBP20.17■□□□□ 0.82
HIF3A-211ENST00000528563 AGTPBP1Q9UPW5 1226 aa20.17■□□□□ 0.82
HIF3A-211ENST00000528563 USP17L10C9JJH3 530 aa20.16■□□□□ 0.82
HIF3A-211ENST00000528563 APPP05067 770 aa20.16■□□□□ 0.82
HIF3A-211ENST00000528563 IFFO2Q5TF58 517 aa20.16■□□□□ 0.82
HIF3A-211ENST00000528563 C17orf99Q6UX52 265 aa20.16■□□□□ 0.82
HIF3A-211ENST00000528563 C16orf86Q6ZW13 317 aa20.16■□□□□ 0.82
HIF3A-211ENST00000528563 IFNL3Q8IZI9 196 aa20.16■□□□□ 0.82
HIF3A-211ENST00000528563 RILPL2Q969X0 211 aa20.16■□□□□ 0.82
HIF3A-211ENST00000528563 ADGRA2Q96PE1 1338 aa20.15■□□□□ 0.82
HIF3A-211ENST00000528563 CYP2C8P10632 490 aa20.15■□□□□ 0.82
HIF3A-211ENST00000528563 MTMR2Q13614 643 aa20.15■□□□□ 0.82
HIF3A-211ENST00000528563 TREML2Q5T2D2 321 aa20.15■□□□□ 0.82
HIF3A-211ENST00000528563 FAM227BQ96M60 508 aa20.15■□□□□ 0.82
HIF3A-211ENST00000528563 FOXP2O15409 715 aa20.14■□□□□ 0.81
HIF3A-211ENST00000528563 SEPT2Q15019 361 aa20.14■□□□□ 0.81
HIF3A-211ENST00000528563 RAB3GAP1Q15042 981 aa20.14■□□□□ 0.81
HIF3A-211ENST00000528563 CCDC129Q6ZRS4 1044 aa20.14■□□□□ 0.81
HIF3A-211ENST00000528563 ERO1AQ96HE7 468 aa20.14■□□□□ 0.81
HIF3A-211ENST00000528563 CCDC17Q96LX7 622 aa20.14■□□□□ 0.81
HIF3A-211ENST00000528563 PARK7Q99497 189 aaKnown RBP20.14■□□□□ 0.81
HIF3A-211ENST00000528563 SDSP20132 328 aa20.13■□□□□ 0.81
HIF3A-211ENST00000528563 CAP1Q01518 475 aa20.13■□□□□ 0.81
HIF3A-211ENST00000528563 PKN2Q16513 984 aaKnown RBP20.13■□□□□ 0.81
HIF3A-211ENST00000528563 MCMDC2Q4G0Z9 681 aa20.13■□□□□ 0.81
HIF3A-211ENST00000528563 ABHD8Q96I13 439 aa20.13■□□□□ 0.81
HIF3A-211ENST00000528563 NACAP1Q9BZK3 213 aa20.13■□□□□ 0.81
HIF3A-211ENST00000528563 EMILIN3Q9NT22 766 aa20.13■□□□□ 0.81
HIF3A-211ENST00000528563 A0A0D9SFI3 127 aa20.12■□□□□ 0.81
HIF3A-211ENST00000528563 MINDY4BA8MYZ0 360 aa20.12■□□□□ 0.81
HIF3A-211ENST00000528563 TDO2P48775 406 aa20.12■□□□□ 0.81
HIF3A-211ENST00000528563 NMIQ13287 307 aaPredicted RBP20.12■□□□□ 0.81
HIF3A-211ENST00000528563 CD99L2Q8TCZ2 262 aa20.12■□□□□ 0.81
HIF3A-211ENST00000528563 ACER1Q8TDN7 264 aa20.12■□□□□ 0.81
HIF3A-211ENST00000528563 KIAA1683Q9H0B3 1180 aa20.12■□□□□ 0.81
HIF3A-211ENST00000528563 TMOD4Q9NZQ9 345 aa20.12■□□□□ 0.81
HIF3A-211ENST00000528563 CPA4Q9UI42 421 aa20.12■□□□□ 0.81
HIF3A-211ENST00000528563 MPHOSPH10O00566 681 aaKnown RBP20.11■□□□□ 0.81
HIF3A-211ENST00000528563 AKR1B1P15121 316 aa20.11■□□□□ 0.81
HIF3A-211ENST00000528563 HOXA7P31268 230 aaPredicted RBP20.11■□□□□ 0.81
HIF3A-211ENST00000528563 USP17L2Q6R6M4 530 aa20.11■□□□□ 0.81
HIF3A-211ENST00000528563 TMEM179Q6ZVK1 233 aa20.11■□□□□ 0.81
HIF3A-211ENST00000528563 SIAH1Q8IUQ4 282 aa20.11■□□□□ 0.81
HIF3A-211ENST00000528563 BCRP11274 1271 aa20.11■□□□□ 0.81
HIF3A-211ENST00000528563 ALX1Q15699 326 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms