RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 KIF5BP33176 963 aa17.08■□□□□ 0.32
ECHDC1-220ENST00000528402 TROAPQ12815 778 aa17.08■□□□□ 0.32
ECHDC1-220ENST00000528402 RNF214Q8ND24 703 aa17.08■□□□□ 0.32
ECHDC1-220ENST00000528402 ENGASEQ8NFI3 743 aa17.08■□□□□ 0.32
ECHDC1-220ENST00000528402 RTFDC1Q9BY42 306 aaPredicted RBP17.08■□□□□ 0.32
ECHDC1-220ENST00000528402 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.08■□□□□ 0.32
ECHDC1-220ENST00000528402 ECM29Q5VYK3 1845 aa17.08■□□□□ 0.32
ECHDC1-220ENST00000528402 GAKO14976 1311 aa17.07■□□□□ 0.32
ECHDC1-220ENST00000528402 CYP2D7A0A087X1C5 515 aa17.07■□□□□ 0.32
ECHDC1-220ENST00000528402 KIF28PB7ZC32 967 aa17.07■□□□□ 0.32
ECHDC1-220ENST00000528402 CMA1P23946 247 aa17.07■□□□□ 0.32
ECHDC1-220ENST00000528402 TYRO3Q06418 890 aa17.07■□□□□ 0.32
ECHDC1-220ENST00000528402 RILPL1Q5EBL4 403 aa17.07■□□□□ 0.32
ECHDC1-220ENST00000528402 MFSD14BQ5SR56 506 aa17.07■□□□□ 0.32
ECHDC1-220ENST00000528402 NOSTRINQ8IVI9 506 aa17.07■□□□□ 0.32
ECHDC1-220ENST00000528402 ZNF444Q8N0Y2 327 aaPredicted RBP17.07■□□□□ 0.32
ECHDC1-220ENST00000528402 STK11IPQ8N1F8 1099 aa17.07■□□□□ 0.32
ECHDC1-220ENST00000528402 FAM200AQ8TCP9 573 aa17.07■□□□□ 0.32
ECHDC1-220ENST00000528402 SH3RF3Q8TEJ3 882 aaPredicted RBP17.07■□□□□ 0.32
ECHDC1-220ENST00000528402 CLIC4Q9Y696 253 aa17.07■□□□□ 0.32
ECHDC1-220ENST00000528402 MORC2Q9Y6X9 1032 aaPredicted RBP17.07■□□□□ 0.32
ECHDC1-220ENST00000528402 MMP10P09238 476 aa17.06■□□□□ 0.32
ECHDC1-220ENST00000528402 BTDP43251 543 aa17.06■□□□□ 0.32
ECHDC1-220ENST00000528402 GNAQP50148 359 aa17.06■□□□□ 0.32
ECHDC1-220ENST00000528402 SNW1Q13573 536 aaKnown RBP17.06■□□□□ 0.32
ECHDC1-220ENST00000528402 STYK1Q6J9G0 422 aa17.06■□□□□ 0.32
ECHDC1-220ENST00000528402 FAM177A1Q8N128 213 aaPredicted RBP17.06■□□□□ 0.32
ECHDC1-220ENST00000528402 FSIP1Q8NA03 581 aa17.06■□□□□ 0.32
ECHDC1-220ENST00000528402 MKNK2Q9HBH9 465 aa17.06■□□□□ 0.32
ECHDC1-220ENST00000528402 CCDC39Q9UFE4 941 aa17.06■□□□□ 0.32
ECHDC1-220ENST00000528402 CEP131Q9UPN4 1083 aa17.06■□□□□ 0.32
ECHDC1-220ENST00000528402 NAV1Q8NEY1 1877 aa17.05■□□□□ 0.32
ECHDC1-220ENST00000528402 ESPNB1AK53 854 aa17.05■□□□□ 0.32
ECHDC1-220ENST00000528402 PRDM1O75626 825 aa17.05■□□□□ 0.32
ECHDC1-220ENST00000528402 USP17L8P0C7I0 530 aa17.05■□□□□ 0.32
ECHDC1-220ENST00000528402 CAMK4Q16566 473 aa17.05■□□□□ 0.32
ECHDC1-220ENST00000528402 DPP8Q6V1X1 898 aaPredicted RBP17.05■□□□□ 0.32
ECHDC1-220ENST00000528402 TMTC3Q6ZXV5 915 aa17.05■□□□□ 0.32
ECHDC1-220ENST00000528402 TGFBRAP1Q8WUH2 860 aa17.05■□□□□ 0.32
ECHDC1-220ENST00000528402 TIGD1Q96MW7 591 aa17.05■□□□□ 0.32
ECHDC1-220ENST00000528402 AIFM3Q96NN9 605 aa17.05■□□□□ 0.32
ECHDC1-220ENST00000528402 BRMS1Q9HCU9 246 aa17.05■□□□□ 0.32
ECHDC1-220ENST00000528402 JAG2Q9Y219 1238 aa17.05■□□□□ 0.32
ECHDC1-220ENST00000528402 CUTAO60888 179 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 TFAP4Q01664 338 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 FUT2Q10981 343 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 TEX11Q8IYF3 940 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 FMR1NBQ8N0W7 255 aaPredicted RBP17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 MRIQ9BWK5 157 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 FTOQ9C0B1 505 aaKnown RBP eCLIP17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 KAT14Q9H8E8 782 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 FAM237AA0A1B0GTK4 181 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 BMP15O95972 392 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 CYP2D6P10635 497 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 FKBP1AP62942 108 aaKnown RBP17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 DIXDC1Q155Q3 683 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 ZSCAN30Q86W11 494 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 DIS3L2Q8IYB7 885 aaKnown RBP17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 ELOA2Q8IYF1 753 aaPredicted RBP17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 GPR101Q96P66 508 aaPredicted RBP17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 LZTS2Q9BRK4 669 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 GJB4Q9NTQ9 266 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 TAOK2Q9UL54 1235 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 MRVI1Q9Y6F6 885 aa17.04■□□□□ 0.32
ECHDC1-220ENST00000528402 TNS1Q9HBL0 1735 aaKnown RBP17.03■□□□□ 0.32
ECHDC1-220ENST00000528402 G3V3G9 751 aa17.03■□□□□ 0.32
ECHDC1-220ENST00000528402 PTPAQ15257 358 aa17.03■□□□□ 0.32
ECHDC1-220ENST00000528402 AXDND1Q5T1B0 1012 aaPredicted RBP17.03■□□□□ 0.32
ECHDC1-220ENST00000528402 DCAF8Q5TAQ9 597 aa17.03■□□□□ 0.32
ECHDC1-220ENST00000528402 CC2D2BQ6DHV5 1058 aa17.03■□□□□ 0.32
ECHDC1-220ENST00000528402 PODNQ7Z5L7 613 aa17.03■□□□□ 0.32
ECHDC1-220ENST00000528402 CKAP2LQ8IYA6 745 aa17.03■□□□□ 0.32
ECHDC1-220ENST00000528402 GOLPH3LQ9H4A5 285 aa17.03■□□□□ 0.32
ECHDC1-220ENST00000528402 BTBD18B2RXH4 712 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 H0YIN7 160 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 TSPY3P0CV98 308 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 TSPY8P0CW00 308 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 GUCY1A2P33402 732 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 GTF2IP78347 998 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 GRIK5Q16478 980 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 STX1AQ16623 288 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 GRIPAP1Q4V328 841 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 FAM47AQ5JRC9 791 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 C16orf86Q6ZW13 317 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 CNKSR1Q969H4 720 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 SDF4Q9BRK5 362 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 PHF20Q9BVI0 1012 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 SH3GLB2Q9NR46 395 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 ANO10Q9NW15 660 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 CDK5RAP2Q96SN8 1893 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 QSER1Q2KHR3 1735 aa17.02■□□□□ 0.31
ECHDC1-220ENST00000528402 TPM3P06753 285 aa17.01■□□□□ 0.31
ECHDC1-220ENST00000528402 CLCN1P35523 988 aa17.01■□□□□ 0.31
ECHDC1-220ENST00000528402 KRT2P35908 639 aa17.01■□□□□ 0.31
ECHDC1-220ENST00000528402 RHBDL3P58872 404 aa17.01■□□□□ 0.31
ECHDC1-220ENST00000528402 PKN1Q16512 942 aa17.01■□□□□ 0.31
ECHDC1-220ENST00000528402 RCSD1Q6JBY9 416 aa17.01■□□□□ 0.31
ECHDC1-220ENST00000528402 HHIPL2Q6UWX4 724 aa17.01■□□□□ 0.31
ECHDC1-220ENST00000528402 ZNF579Q8NAF0 562 aaKnown RBP17.01■□□□□ 0.31
ECHDC1-220ENST00000528402 NAT10Q9H0A0 1025 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms