RNA–Protein interactions for RNA: ENST00000527205.1

TTC39A-215, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 4

Gene TTC39A, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-215ENST00000527205 USP17L12C9JPN9 530 aa23.34■■□□□ 1.33
TTC39A-215ENST00000527205 USP17L21D6R901 530 aa23.34■■□□□ 1.33
TTC39A-215ENST00000527205 LRRFIP1Q32MZ4 808 aaKnown RBP23.34■■□□□ 1.33
TTC39A-215ENST00000527205 CTR9Q6PD62 1173 aa23.34■■□□□ 1.33
TTC39A-215ENST00000527205 FAM227BQ96M60 508 aa23.34■■□□□ 1.33
TTC39A-215ENST00000527205 CFHR5Q9BXR6 569 aa23.34■■□□□ 1.33
TTC39A-215ENST00000527205 ZBTB21Q9ULJ3 1066 aa23.34■■□□□ 1.33
TTC39A-215ENST00000527205 A0A0G2JLL6 359 aaPredicted RBP23.33■■□□□ 1.33
TTC39A-215ENST00000527205 TRIM75PA6NK02 468 aa23.33■■□□□ 1.33
TTC39A-215ENST00000527205 FOXP2O15409 715 aa23.33■■□□□ 1.33
TTC39A-215ENST00000527205 GSPT1P15170 499 aaKnown RBP23.33■■□□□ 1.33
TTC39A-215ENST00000527205 CRHR2Q13324 411 aa23.33■■□□□ 1.33
TTC39A-215ENST00000527205 DGKZQ13574 1117 aa23.33■■□□□ 1.33
TTC39A-215ENST00000527205 C12orf60Q5U649 245 aa23.33■■□□□ 1.33
TTC39A-215ENST00000527205 PRRT2Q7Z6L0 340 aaPredicted RBP23.33■■□□□ 1.33
TTC39A-215ENST00000527205 SKAP1Q86WV1 359 aa23.33■■□□□ 1.33
TTC39A-215ENST00000527205 CXCL11O14625 94 aa23.32■■□□□ 1.32
TTC39A-215ENST00000527205 ALDH1A1P00352 501 aa23.32■■□□□ 1.32
TTC39A-215ENST00000527205 NMIQ13287 307 aaPredicted RBP23.32■■□□□ 1.32
TTC39A-215ENST00000527205 GPAT2Q6NUI2 795 aa23.32■■□□□ 1.32
TTC39A-215ENST00000527205 USP17L5A8MUK1 530 aa23.31■■□□□ 1.32
TTC39A-215ENST00000527205 GH2P01242 217 aa23.31■■□□□ 1.32
TTC39A-215ENST00000527205 TTC22Q5TAA0 569 aa23.31■■□□□ 1.32
TTC39A-215ENST00000527205 GPR25O00155 361 aa23.3■■□□□ 1.32
TTC39A-215ENST00000527205 ASNSP08243 561 aa23.3■■□□□ 1.32
TTC39A-215ENST00000527205 GUCY1A2P33402 732 aa23.3■■□□□ 1.32
TTC39A-215ENST00000527205 SPP2Q13103 211 aa23.3■■□□□ 1.32
TTC39A-215ENST00000527205 TAF1CQ15572 869 aaPredicted RBP23.3■■□□□ 1.32
TTC39A-215ENST00000527205 CERKLQ49MI3 558 aaPredicted RBP23.3■■□□□ 1.32
TTC39A-215ENST00000527205 VPS53Q5VIR6 699 aa23.3■■□□□ 1.32
TTC39A-215ENST00000527205 ZNF296Q8WUU4 475 aaPredicted RBP23.3■■□□□ 1.32
TTC39A-215ENST00000527205 ARPP21Q9UBL0 812 aaPredicted RBP23.3■■□□□ 1.32
TTC39A-215ENST00000527205 LAMA4Q16363 1823 aa23.3■■□□□ 1.32
TTC39A-215ENST00000527205 SDSP20132 328 aa23.29■■□□□ 1.32
TTC39A-215ENST00000527205 OTUD7BQ6GQQ9 843 aa23.29■■□□□ 1.32
TTC39A-215ENST00000527205 GADL1Q6ZQY3 521 aa23.29■■□□□ 1.32
TTC39A-215ENST00000527205 C16orf86Q6ZW13 317 aa23.29■■□□□ 1.32
TTC39A-215ENST00000527205 ANKRD23Q86SG2 305 aa23.29■■□□□ 1.32
TTC39A-215ENST00000527205 ZNF589Q86UQ0 364 aaPredicted RBP23.29■■□□□ 1.32
TTC39A-215ENST00000527205 IFNL3Q8IZI9 196 aa23.29■■□□□ 1.32
TTC39A-215ENST00000527205 ZNF280CQ8ND82 737 aa23.29■■□□□ 1.32
TTC39A-215ENST00000527205 ROBO3Q96MS0 1386 aa23.28■■□□□ 1.32
TTC39A-215ENST00000527205 MGAMO43451 1857 aa23.28■■□□□ 1.32
TTC39A-215ENST00000527205 MYH4Q9Y623 1939 aa23.28■■□□□ 1.32
TTC39A-215ENST00000527205 PATL2C9JE40 543 aaKnown RBP23.28■■□□□ 1.32
TTC39A-215ENST00000527205 GNAT2P19087 354 aa23.28■■□□□ 1.32
TTC39A-215ENST00000527205 CDK8P49336 464 aa23.28■■□□□ 1.32
TTC39A-215ENST00000527205 ABCB5Q2M3G0 1257 aa23.28■■□□□ 1.32
TTC39A-215ENST00000527205 SBK1Q52WX2 424 aa23.28■■□□□ 1.32
TTC39A-215ENST00000527205 GIMAP6Q6P9H5 292 aa23.28■■□□□ 1.32
TTC39A-215ENST00000527205 STK11IPQ8N1F8 1099 aa23.28■■□□□ 1.32
TTC39A-215ENST00000527205 DDRGK1Q96HY6 314 aa23.28■■□□□ 1.32
TTC39A-215ENST00000527205 HELLSQ9NRZ9 838 aa23.28■■□□□ 1.32
TTC39A-215ENST00000527205 PDHXO00330 501 aa23.27■■□□□ 1.32
TTC39A-215ENST00000527205 AKR1B1P15121 316 aa23.27■■□□□ 1.32
TTC39A-215ENST00000527205 TDO2P48775 406 aa23.27■■□□□ 1.32
TTC39A-215ENST00000527205 HMGCS2P54868 508 aa23.27■■□□□ 1.32
TTC39A-215ENST00000527205 TREML2Q5T2D2 321 aa23.27■■□□□ 1.32
TTC39A-215ENST00000527205 CENPQQ7L2Z9 268 aaPredicted RBP23.27■■□□□ 1.32
TTC39A-215ENST00000527205 WDR18Q9BV38 432 aa23.27■■□□□ 1.32
TTC39A-215ENST00000527205 GINM1Q9NU53 330 aa23.27■■□□□ 1.32
TTC39A-215ENST00000527205 SWAP70Q9UH65 585 aa23.27■■□□□ 1.32
TTC39A-215ENST00000527205 MINDY4BA8MYZ0 360 aa23.26■■□□□ 1.31
TTC39A-215ENST00000527205 APPP05067 770 aa23.26■■□□□ 1.31
TTC39A-215ENST00000527205 CAP1Q01518 475 aa23.26■■□□□ 1.31
TTC39A-215ENST00000527205 MTMR2Q13614 643 aa23.26■■□□□ 1.31
TTC39A-215ENST00000527205 CLEC10AQ8IUN9 316 aa23.26■■□□□ 1.31
TTC39A-215ENST00000527205 TBC1D2Q9BYX2 928 aa23.26■■□□□ 1.31
TTC39A-215ENST00000527205 AS3MTQ9HBK9 375 aa23.26■■□□□ 1.31
TTC39A-215ENST00000527205 ZCCHC17Q9NP64 241 aaKnown RBP23.26■■□□□ 1.31
TTC39A-215ENST00000527205 ADGRA2Q96PE1 1338 aa23.26■■□□□ 1.31
TTC39A-215ENST00000527205 CENPBP07199 599 aaPredicted RBP23.25■■□□□ 1.31
TTC39A-215ENST00000527205 SEPT2Q15019 361 aa23.25■■□□□ 1.31
TTC39A-215ENST00000527205 RAB3GAP1Q15042 981 aa23.25■■□□□ 1.31
TTC39A-215ENST00000527205 MCMDC2Q4G0Z9 681 aa23.25■■□□□ 1.31
TTC39A-215ENST00000527205 NOM1Q5C9Z4 860 aaKnown RBP23.25■■□□□ 1.31
TTC39A-215ENST00000527205 SH3D19Q5HYK7 790 aa23.25■■□□□ 1.31
TTC39A-215ENST00000527205 AMOTL1Q8IY63 956 aa23.25■■□□□ 1.31
TTC39A-215ENST00000527205 ZFYVE28Q9HCC9 887 aa23.25■■□□□ 1.31
TTC39A-215ENST00000527205 PARP14Q460N5 1801 aa23.24■■□□□ 1.31
TTC39A-215ENST00000527205 FASTKD5Q7L8L6 764 aaKnown RBP23.24■■□□□ 1.31
TTC39A-215ENST00000527205 ACER1Q8TDN7 264 aa23.24■■□□□ 1.31
TTC39A-215ENST00000527205 IL25Q9H293 177 aa23.24■■□□□ 1.31
TTC39A-215ENST00000527205 MPHOSPH10O00566 681 aaKnown RBP23.23■■□□□ 1.31
TTC39A-215ENST00000527205 FKTNO75072 461 aa23.23■■□□□ 1.31
TTC39A-215ENST00000527205 CYP2C8P10632 490 aa23.23■■□□□ 1.31
TTC39A-215ENST00000527205 BACE1P56817 501 aa23.23■■□□□ 1.31
TTC39A-215ENST00000527205 TICAM2Q86XR7 235 aa23.23■■□□□ 1.31
TTC39A-215ENST00000527205 TNS4Q8IZW8 715 aa23.23■■□□□ 1.31
TTC39A-215ENST00000527205 NAPBQ9H115 298 aa23.23■■□□□ 1.31
TTC39A-215ENST00000527205 CABP5Q9NP86 173 aa23.23■■□□□ 1.31
TTC39A-215ENST00000527205 AGTPBP1Q9UPW5 1226 aa23.23■■□□□ 1.31
TTC39A-215ENST00000527205 CCDC171Q6TFL3 1326 aa23.23■■□□□ 1.31
TTC39A-215ENST00000527205 NEFLP07196 543 aa23.22■■□□□ 1.31
TTC39A-215ENST00000527205 CWC27Q6UX04 472 aaKnown RBP23.22■■□□□ 1.31
TTC39A-215ENST00000527205 PROCA1Q8NCQ7 364 aaPredicted RBP23.22■■□□□ 1.31
TTC39A-215ENST00000527205 TACC3Q9Y6A5 838 aa23.22■■□□□ 1.31
TTC39A-215ENST00000527205 RLFQ13129 1914 aa23.21■■□□□ 1.31
TTC39A-215ENST00000527205 USP17L10C9JJH3 530 aa23.21■■□□□ 1.31
TTC39A-215ENST00000527205 TLR2O60603 784 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms