RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 TMEM57Q8N5G2 664 aa14.37□□□□□ -0.11
CAPN1-204ENST00000526468 DIS3LQ8TF46 1054 aaKnown RBP14.37□□□□□ -0.11
CAPN1-204ENST00000526468 DBNDD2Q9BQY9 259 aa14.37□□□□□ -0.11
CAPN1-204ENST00000526468 C1orf115Q9H7X2 142 aa14.37□□□□□ -0.11
CAPN1-204ENST00000526468 TMOD4Q9NZQ9 345 aa14.37□□□□□ -0.11
CAPN1-204ENST00000526468 PI4KBQ9UBF8 816 aa14.37□□□□□ -0.11
CAPN1-204ENST00000526468 FPGT-TNNI3KV9GXZ4 949 aa14.37□□□□□ -0.11
CAPN1-204ENST00000526468 ASNSP08243 561 aa14.36□□□□□ -0.11
CAPN1-204ENST00000526468 CCDC158Q5M9N0 1113 aa14.36□□□□□ -0.11
CAPN1-204ENST00000526468 ZKSCAN2Q63HK3 967 aa14.36□□□□□ -0.11
CAPN1-204ENST00000526468 ADGRA1Q86SQ6 560 aa14.36□□□□□ -0.11
CAPN1-204ENST00000526468 FTSJ3Q8IY81 847 aaKnown RBP14.36□□□□□ -0.11
CAPN1-204ENST00000526468 TGFBRAP1Q8WUH2 860 aa14.36□□□□□ -0.11
CAPN1-204ENST00000526468 DHX36Q9H2U1 1008 aaKnown RBP14.36□□□□□ -0.11
CAPN1-204ENST00000526468 DNAJC18Q9H819 358 aa14.36□□□□□ -0.11
CAPN1-204ENST00000526468 SAP30BPQ9UHR5 308 aaKnown RBP14.36□□□□□ -0.11
CAPN1-204ENST00000526468 ZBTB21Q9ULJ3 1066 aa14.36□□□□□ -0.11
CAPN1-204ENST00000526468 HLA-DOAP06340 250 aa14.35□□□□□ -0.11
CAPN1-204ENST00000526468 SHROOM1Q2M3G4 852 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-204ENST00000526468 SH3D19Q5HYK7 790 aa14.35□□□□□ -0.11
CAPN1-204ENST00000526468 NECAB2Q7Z6G3 386 aa14.35□□□□□ -0.11
CAPN1-204ENST00000526468 C7orf61Q8IZ16 206 aa14.35□□□□□ -0.11
CAPN1-204ENST00000526468 PAWRQ96IZ0 340 aaKnown RBP14.35□□□□□ -0.11
CAPN1-204ENST00000526468 CRISPLD2Q9H0B8 497 aa14.35□□□□□ -0.11
CAPN1-204ENST00000526468 MYH4Q9Y623 1939 aa14.35□□□□□ -0.11
CAPN1-204ENST00000526468 BACE1P56817 501 aa14.34□□□□□ -0.11
CAPN1-204ENST00000526468 TRIM32Q13049 653 aa14.34□□□□□ -0.11
CAPN1-204ENST00000526468 PDE3AQ14432 1141 aa14.34□□□□□ -0.11
CAPN1-204ENST00000526468 ITPRIPQ8IWB1 547 aa14.34□□□□□ -0.11
CAPN1-204ENST00000526468 SOCS4Q8WXH5 440 aa14.34□□□□□ -0.11
CAPN1-204ENST00000526468 TRIB2Q92519 343 aa14.34□□□□□ -0.11
CAPN1-204ENST00000526468 FEZ1Q99689 392 aa14.34□□□□□ -0.11
CAPN1-204ENST00000526468 WDR18Q9BV38 432 aa14.34□□□□□ -0.11
CAPN1-204ENST00000526468 PRO3102Q9H379 93 aa14.34□□□□□ -0.11
CAPN1-204ENST00000526468 GPR108Q9NPR9 543 aa14.34□□□□□ -0.11
CAPN1-204ENST00000526468 MORF4L1Q9UBU8 362 aa14.34□□□□□ -0.11
CAPN1-204ENST00000526468 PALD1Q9ULE6 856 aa14.34□□□□□ -0.11
CAPN1-204ENST00000526468 PEX10O60683 326 aa14.33□□□□□ -0.12
CAPN1-204ENST00000526468 SURF6O75683 361 aaKnown RBP14.33□□□□□ -0.12
CAPN1-204ENST00000526468 CYP2E1P05181 493 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-204ENST00000526468 CAPN2P17655 700 aa14.33□□□□□ -0.12
CAPN1-204ENST00000526468 CYP2B6P20813 491 aa14.33□□□□□ -0.12
CAPN1-204ENST00000526468 ZAP70P43403 619 aa14.33□□□□□ -0.12
CAPN1-204ENST00000526468 HERVK_113P62684 666 aa14.33□□□□□ -0.12
CAPN1-204ENST00000526468 POLA2Q14181 598 aa14.33□□□□□ -0.12
CAPN1-204ENST00000526468 PAGR1Q9BTK6 254 aa14.33□□□□□ -0.12
CAPN1-204ENST00000526468 HMX1Q9NP08 348 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-204ENST00000526468 PIH1D3Q9NQM4 214 aaKnown RBP14.33□□□□□ -0.12
CAPN1-204ENST00000526468 TLR7Q9NYK1 1049 aaKnown RBP14.33□□□□□ -0.12
CAPN1-204ENST00000526468 DBNLQ9UJU6 430 aaKnown RBP14.33□□□□□ -0.12
CAPN1-204ENST00000526468 RBM19Q9Y4C8 960 aaKnown RBP14.33□□□□□ -0.12
CAPN1-204ENST00000526468 A0A1W2PPC1 479 aa14.32□□□□□ -0.12
CAPN1-204ENST00000526468 USP17L10C9JJH3 530 aa14.32□□□□□ -0.12
CAPN1-204ENST00000526468 IDH1O75874 414 aaKnown RBP14.32□□□□□ -0.12
CAPN1-204ENST00000526468 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
CAPN1-204ENST00000526468 ZKSCAN1P17029 563 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-204ENST00000526468 CYP7A1P22680 504 aa14.32□□□□□ -0.12
CAPN1-204ENST00000526468 JAG1P78504 1218 aa14.32□□□□□ -0.12
CAPN1-204ENST00000526468 CCAR1Q8IX12 1150 aaKnown RBP14.32□□□□□ -0.12
CAPN1-204ENST00000526468 ANKLE1Q8NAG6 615 aa14.32□□□□□ -0.12
CAPN1-204ENST00000526468 MIGA1Q8NAN2 632 aa14.32□□□□□ -0.12
CAPN1-204ENST00000526468 SSH3Q8TE77 659 aa14.32□□□□□ -0.12
CAPN1-204ENST00000526468 CWC22Q9HCG8 908 aaKnown RBP14.32□□□□□ -0.12
CAPN1-204ENST00000526468 TXNRD2Q9NNW7 524 aa14.32□□□□□ -0.12
CAPN1-204ENST00000526468 MCM3APO60318 1980 aa14.32□□□□□ -0.12
CAPN1-204ENST00000526468 RPTORQ8N122 1335 aa14.32□□□□□ -0.12
CAPN1-204ENST00000526468 SMCHD1A6NHR9 2005 aa14.31□□□□□ -0.12
CAPN1-204ENST00000526468 C19orf81C9J6K1 198 aa14.31□□□□□ -0.12
CAPN1-204ENST00000526468 PPP4CP60510 307 aa14.31□□□□□ -0.12
CAPN1-204ENST00000526468 DYNLL1P63167 89 aaKnown RBP14.31□□□□□ -0.12
CAPN1-204ENST00000526468 ZYXQ15942 572 aaKnown RBP14.31□□□□□ -0.12
CAPN1-204ENST00000526468 GPRC5AQ8NFJ5 357 aa14.31□□□□□ -0.12
CAPN1-204ENST00000526468 GTF3C2Q8WUA4 911 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-204ENST00000526468 NUDT12Q9BQG2 462 aa14.31□□□□□ -0.12
CAPN1-204ENST00000526468 GINM1Q9NU53 330 aa14.31□□□□□ -0.12
CAPN1-204ENST00000526468 GJD2Q9UKL4 321 aa14.31□□□□□ -0.12
CAPN1-204ENST00000526468 ZMYND8Q9ULU4 1186 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-204ENST00000526468 SOX1O00570 391 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-204ENST00000526468 GH2P01242 217 aa14.3□□□□□ -0.12
CAPN1-204ENST00000526468 MAPK4P31152 587 aa14.3□□□□□ -0.12
CAPN1-204ENST00000526468 HOXA7P31268 230 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-204ENST00000526468 USP5P45974 858 aa14.3□□□□□ -0.12
CAPN1-204ENST00000526468 ERVK-9P63128 1117 aa14.3□□□□□ -0.12
CAPN1-204ENST00000526468 ERVK-24P63145 666 aa14.3□□□□□ -0.12
CAPN1-204ENST00000526468 ZNF512BQ96KM6 892 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-204ENST00000526468 P2RX7Q99572 595 aaKnown RBP14.3□□□□□ -0.12
CAPN1-204ENST00000526468 APBA2Q99767 749 aa14.3□□□□□ -0.12
CAPN1-204ENST00000526468 NBPF3Q9H094 633 aa14.3□□□□□ -0.12
CAPN1-204ENST00000526468 CCDC8Q9H0W5 538 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-204ENST00000526468 C11orf49Q9H6J7 331 aa14.3□□□□□ -0.12
CAPN1-204ENST00000526468 STAP2Q9UGK3 403 aa14.3□□□□□ -0.12
CAPN1-204ENST00000526468 RGS2P41220 211 aa14.29□□□□□ -0.12
CAPN1-204ENST00000526468 ATP8B2P98198 1209 aa14.29□□□□□ -0.12
CAPN1-204ENST00000526468 USP17L2Q6R6M4 530 aa14.29□□□□□ -0.12
CAPN1-204ENST00000526468 FOXP4Q8IVH2 680 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-204ENST00000526468 MAGEB6Q8N7X4 407 aa14.29□□□□□ -0.12
CAPN1-204ENST00000526468 LRCH3Q96II8 777 aa14.29□□□□□ -0.12
CAPN1-204ENST00000526468 PORCNQ9H237 461 aa14.29□□□□□ -0.12
CAPN1-204ENST00000526468 NDUFB9Q9Y6M9 179 aa14.29□□□□□ -0.12
CAPN1-204ENST00000526468 COL6A3P12111 3177 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms