RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 G3BP1Q13283 466 aaKnown RBP eCLIP12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 ANO1Q5XXA6 986 aa12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 IQCA1Q86XH1 822 aa12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 ZNF526Q8TF50 670 aaPredicted RBP12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 TRIM10Q9UDY6 481 aa12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 GUCA1BQ9UMX6 200 aa12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 USP54Q70EL1 1684 aa12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 KIF28PB7ZC32 967 aa12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 KCTD16Q68DU8 428 aa12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 KLHL10Q6JEL2 608 aa12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 DHX32Q7L7V1 743 aaKnown RBP12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 ZCRB1Q8TBF4 217 aaKnown RBP12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 SCLT1Q96NL6 688 aa12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 SELENOOQ9BVL4 669 aa12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 COL5A2P05997 1499 aaPredicted RBP12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 PDIA3P30101 505 aaKnown RBP12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 CLNS1AP54105 237 aaKnown RBP12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 PPFIA1Q13136 1202 aa12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 WHAMMP3Q1A5X7 153 aa12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 METTL16Q86W50 562 aaKnown RBP12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 ANKRD18AQ8IVF6 992 aa12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 MMS19Q96T76 1030 aa12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 VIPAS39Q9H9C1 493 aa12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 CHPF2Q9P2E5 772 aa12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 TUBE1Q9UJT0 475 aa12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 TFR2Q9UP52 801 aa12.73□□□□□ -0.37
CLNS1A-204ENST00000525428 MED23Q9ULK4 1368 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 C21orf2O43822 256 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 IL2RBP14784 551 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 FNTAP49354 379 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 STX17P56962 302 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 CEP85LQ5SZL2 805 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 BEND3Q5T5X7 828 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 WDR93Q6P2C0 686 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 NGLY1Q96IV0 654 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 KLC4Q9NSK0 619 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 POLR3EQ9NVU0 708 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 GRIN2DO15399 1336 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 ZC3H4Q9UPT8 1303 aaKnown RBP12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 YEATS4O95619 227 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 PDHBP11177 359 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 GCFC2P16383 781 aaKnown RBP12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 CASP14P31944 242 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 NAA25Q14CX7 972 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 CWF19L2Q2TBE0 894 aaKnown RBP12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 SHC4Q6S5L8 630 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 GRAMD1CQ8IYS0 662 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 IFNL2Q8IZJ0 200 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 CALR3Q96L12 384 aaKnown RBP12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 SLF1Q9BQI6 1058 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 TRIM6Q9C030 488 aaPredicted RBP12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 EP400Q96L91 3159 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 COBLO75128 1261 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 USP14P54578 494 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 DDX46Q7L014 1031 aaKnown RBP12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 TEX11Q8IYF3 940 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 SH2D3CQ8N5H7 860 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 NBPF3Q9H094 633 aa12.72□□□□□ -0.37
CLNS1A-204ENST00000525428 COL18A1P39060 1754 aa12.71□□□□□ -0.37
CLNS1A-204ENST00000525428 MEFVO15553 781 aaPredicted RBP12.71□□□□□ -0.37
CLNS1A-204ENST00000525428 PPP1R12BO60237 982 aaPredicted RBP12.71□□□□□ -0.37
CLNS1A-204ENST00000525428 PEX19P40855 299 aa12.71□□□□□ -0.37
CLNS1A-204ENST00000525428 CDR1P51861 262 aa12.71□□□□□ -0.37
CLNS1A-204ENST00000525428 RRP36Q96EU6 259 aaKnown RBP12.71□□□□□ -0.37
CLNS1A-204ENST00000525428 CCNHP51946 323 aaPredicted RBP12.71□□□□□ -0.38
CLNS1A-204ENST00000525428 SND1Q7KZF4 910 aaKnown RBP eCLIP12.71□□□□□ -0.38
CLNS1A-204ENST00000525428 CAGE1Q8TC20 777 aa12.71□□□□□ -0.38
CLNS1A-204ENST00000525428 STAG1Q8WVM7 1258 aa12.71□□□□□ -0.38
CLNS1A-204ENST00000525428 CDC25AP30304 524 aa12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 EIF4A1P60842 406 aaKnown RBP12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 PREPLQ4J6C6 727 aaPredicted RBP12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 USPL1Q5W0Q7 1092 aa12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 CCDC102BQ68D86 513 aa12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 CEP120Q8N960 986 aa12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 AIFM3Q96NN9 605 aa12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 U3KPZ7 1027 aaPredicted RBP12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 PTCD1O75127 700 aaKnown RBP12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 TUBBP07437 444 aa12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 DDR1Q08345 913 aa12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 IFT88Q13099 833 aa12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 CCDC40Q4G0X9 1142 aa12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 NHSL1Q5SYE7 1610 aa12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 CEMIPQ8WUJ3 1361 aa12.7□□□□□ -0.38
CLNS1A-204ENST00000525428 ATP2C2O75185 946 aa12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 TUBB4BP68371 445 aa12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 FAM182BQ5T319 152 aa12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 SLC9C2Q5TAH2 1124 aa12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 B4GALNT4Q76KP1 1039 aa12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 ARL8AQ96BM9 186 aa12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 A1CFQ9NQ94 594 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 DDX20Q9UHI6 824 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 CPLX1O14810 134 aa12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 CALRP27797 417 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 FXR1P51114 621 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 SF3B2Q13435 895 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 RASGRP2Q7LDG7 609 aa12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 PANX2Q96RD6 677 aa12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 ZNF185O15231 689 aa12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 MATR3P43243 847 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLNS1A-204ENST00000525428 CABP4P57796 275 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms