RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ETF1P62495 437 aaKnown RBP5.23□□□□□ -1.57
CSDE1-208ENST00000524652 CCDC85BQ15834 202 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-208ENST00000524652 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-208ENST00000524652 TMEM40Q8WWA1 233 aa5.23□□□□□ -1.57
CSDE1-208ENST00000524652 COX4I2Q96KJ9 171 aa5.23□□□□□ -1.57
CSDE1-208ENST00000524652 LMNB1P20700 586 aa5.22□□□□□ -1.57
CSDE1-208ENST00000524652 JAG1P78504 1218 aa5.22□□□□□ -1.57
CSDE1-208ENST00000524652 ZP2Q05996 745 aa5.22□□□□□ -1.57
CSDE1-208ENST00000524652 FZD5Q13467 585 aa5.22□□□□□ -1.57
CSDE1-208ENST00000524652 NKG7Q16617 165 aa5.22□□□□□ -1.57
CSDE1-208ENST00000524652 SFRP5Q5T4F7 317 aa5.22□□□□□ -1.57
CSDE1-208ENST00000524652 AGMOQ6ZNB7 445 aa5.22□□□□□ -1.57
CSDE1-208ENST00000524652 HID1Q8IV36 788 aa5.22□□□□□ -1.57
CSDE1-208ENST00000524652 MFSD4AQ8N468 514 aa5.22□□□□□ -1.57
CSDE1-208ENST00000524652 MIPEPQ99797 713 aa5.22□□□□□ -1.57
CSDE1-208ENST00000524652 LMCD1Q9NZU5 365 aa5.22□□□□□ -1.57
CSDE1-208ENST00000524652 TPX2Q9ULW0 747 aaKnown RBP5.22□□□□□ -1.57
CSDE1-208ENST00000524652 RLBP1P12271 317 aa5.21□□□□□ -1.58
CSDE1-208ENST00000524652 EAPPQ56P03 285 aaPredicted RBP5.21□□□□□ -1.58
CSDE1-208ENST00000524652 LETMD1Q6P1Q0 360 aa5.21□□□□□ -1.58
CSDE1-208ENST00000524652 SND1Q7KZF4 910 aaKnown RBP eCLIP5.21□□□□□ -1.58
CSDE1-208ENST00000524652 DUSP9Q99956 384 aaKnown RBP5.21□□□□□ -1.58
CSDE1-208ENST00000524652 PRDM7Q9NQW5 492 aa5.21□□□□□ -1.58
CSDE1-208ENST00000524652 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
CSDE1-208ENST00000524652 ANKRD33BA6NCL7 494 aa5.2□□□□□ -1.58
CSDE1-208ENST00000524652 FAM155AB1AL88 458 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-208ENST00000524652 GFRA2O00451 464 aa5.2□□□□□ -1.58
CSDE1-208ENST00000524652 FARP2O94887 1054 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-208ENST00000524652 CST3P01034 146 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-208ENST00000524652 GRK4P32298 578 aa5.2□□□□□ -1.58
CSDE1-208ENST00000524652 KIR3DL1P43629 444 aa5.2□□□□□ -1.58
CSDE1-208ENST00000524652 CDK8P49336 464 aa5.2□□□□□ -1.58
CSDE1-208ENST00000524652 LIG3P49916 1009 aa5.2□□□□□ -1.58
CSDE1-208ENST00000524652 SEPT6Q14141 434 aa5.2□□□□□ -1.58
CSDE1-208ENST00000524652 PRAMEF13Q5VWM6 474 aa5.2□□□□□ -1.58
CSDE1-208ENST00000524652 THAP5Q7Z6K1 395 aa5.2□□□□□ -1.58
CSDE1-208ENST00000524652 ZSWIM9Q86XI8 627 aa5.2□□□□□ -1.58
CSDE1-208ENST00000524652 MIR1-1HGQ9H1L0 117 aa5.2□□□□□ -1.58
CSDE1-208ENST00000524652 SEMA3GQ9NS98 782 aa5.2□□□□□ -1.58
CSDE1-208ENST00000524652 PRDM2Q13029 1718 aa5.2□□□□□ -1.58
CSDE1-208ENST00000524652 ARID1BQ8NFD5 2236 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-208ENST00000524652 PRR33A8MZF0 331 aa5.19□□□□□ -1.58
CSDE1-208ENST00000524652 CYP7A1P22680 504 aa5.19□□□□□ -1.58
CSDE1-208ENST00000524652 ST13P50502 369 aaKnown RBP5.19□□□□□ -1.58
CSDE1-208ENST00000524652 ZNF648Q5T619 568 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-208ENST00000524652 MRPL41Q8IXM3 137 aaKnown RBP5.19□□□□□ -1.58
CSDE1-208ENST00000524652 HSPA12BQ96MM6 686 aa5.19□□□□□ -1.58
CSDE1-208ENST00000524652 NOC4LQ9BVI4 516 aaKnown RBP5.19□□□□□ -1.58
CSDE1-208ENST00000524652 FAM53CQ9NYF3 392 aa5.19□□□□□ -1.58
CSDE1-208ENST00000524652 CTNND2Q9UQB3 1225 aa5.19□□□□□ -1.58
CSDE1-208ENST00000524652 PCDHB5Q9Y5E4 795 aa5.19□□□□□ -1.58
CSDE1-208ENST00000524652 ST14Q9Y5Y6 855 aa5.19□□□□□ -1.58
CSDE1-208ENST00000524652 CAPN6Q9Y6Q1 641 aa5.19□□□□□ -1.58
CSDE1-208ENST00000524652 PDE4BQ07343 736 aa5.18□□□□□ -1.58
CSDE1-208ENST00000524652 KCNMB1Q16558 191 aa5.18□□□□□ -1.58
CSDE1-208ENST00000524652 TSNAXIP1Q2TAA8 658 aa5.18□□□□□ -1.58
CSDE1-208ENST00000524652 NPAS4Q8IUM7 802 aa5.18□□□□□ -1.58
CSDE1-208ENST00000524652 CARS2Q9HA77 564 aaKnown RBP5.18□□□□□ -1.58
CSDE1-208ENST00000524652 ATP13A1Q9HD20 1204 aa5.18□□□□□ -1.58
CSDE1-208ENST00000524652 CCDC88BA6NC98 1476 aa5.18□□□□□ -1.58
CSDE1-208ENST00000524652 CNTNAP4Q9C0A0 1308 aa5.18□□□□□ -1.58
CSDE1-208ENST00000524652 NESP48681 1621 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 H3BS24 57 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 PGRP06401 933 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 TFE3P19532 575 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-208ENST00000524652 AFMP43652 599 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 DAB2P98082 770 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 RPL6Q02878 288 aaKnown RBP5.17□□□□□ -1.58
CSDE1-208ENST00000524652 MEI1Q5TIA1 1274 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 CDKAL1Q5VV42 579 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 DIEXFQ68CQ4 756 aaKnown RBP5.17□□□□□ -1.58
CSDE1-208ENST00000524652 SLC6A19Q695T7 634 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 CCDC84Q86UT8 332 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-208ENST00000524652 BHLHE22Q8NFJ8 381 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-208ENST00000524652 RIN3Q8TB24 985 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 CCDC120Q96HB5 630 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 RNF19AQ9NV58 838 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 TJP2Q9UDY2 1190 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 PARP2Q9UGN5 583 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 ADAM30Q9UKF2 790 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 KIF21AQ7Z4S6 1674 aa5.17□□□□□ -1.58
CSDE1-208ENST00000524652 LMTK3Q96Q04 1460 aa5.16□□□□□ -1.58
CSDE1-208ENST00000524652 ZNF503-AS2A6NEH8 195 aa5.16□□□□□ -1.58
CSDE1-208ENST00000524652 LRRC10BA6NIK2 292 aa5.16□□□□□ -1.58
CSDE1-208ENST00000524652 ETV3P41162 512 aa5.16□□□□□ -1.58
CSDE1-208ENST00000524652 PSMD2Q13200 908 aa5.16□□□□□ -1.58
CSDE1-208ENST00000524652 TAF1CQ15572 869 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-208ENST00000524652 PKN1Q16512 942 aa5.16□□□□□ -1.58
CSDE1-208ENST00000524652 MAP3K11Q16584 847 aa5.16□□□□□ -1.58
CSDE1-208ENST00000524652 DNAJC14Q6Y2X3 702 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-208ENST00000524652 TMC4Q7Z404 712 aa5.16□□□□□ -1.58
CSDE1-208ENST00000524652 MCATQ8IVS2 390 aaKnown RBP5.16□□□□□ -1.58
CSDE1-208ENST00000524652 KSR1Q8IVT5 923 aa5.16□□□□□ -1.58
CSDE1-208ENST00000524652 PIWIL2Q8TC59 973 aaKnown RBP5.16□□□□□ -1.58
CSDE1-208ENST00000524652 XAGE3Q8WTP9 111 aa5.16□□□□□ -1.58
CSDE1-208ENST00000524652 TMEM87BQ96K49 555 aa5.16□□□□□ -1.58
CSDE1-208ENST00000524652 SLC38A3Q99624 504 aa5.16□□□□□ -1.58
CSDE1-208ENST00000524652 DBX1A6NMT0 343 aa5.15□□□□□ -1.59
CSDE1-208ENST00000524652 CBX7O95931 251 aa5.15□□□□□ -1.59
CSDE1-208ENST00000524652 GLI1P08151 1106 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms