RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 TSPY2A6NKD2 308 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 GOLGA6L6A8MZA4 724 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 ESPNB1AK53 854 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 ZBTB22O15209 634 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 SPTLC2O15270 562 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 POLR3DP05423 398 aaPredicted RBP12.45□□□□□ -0.42
SPIDR-222ENST00000524006 IFNAR1P17181 557 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 TM4SF1P30408 202 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 ADD1P35611 737 aaKnown RBP12.45□□□□□ -0.42
SPIDR-222ENST00000524006 GPSM2P81274 684 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 TYRO3Q06418 890 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 STX1AQ16623 288 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 HS1BP3Q53T59 392 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 ANO1Q5XXA6 986 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 OTUD7BQ6GQQ9 843 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 ARHGAP27Q6ZUM4 889 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 C15orf52Q6ZUT6 534 aaKnown RBP12.45□□□□□ -0.42
SPIDR-222ENST00000524006 FBXW7Q969H0 707 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 CRAMP1Q96RY5 1269 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 POLR3EQ9NVU0 708 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 MCM9Q9NXL9 1143 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 PARP3Q9Y6F1 533 aa12.45□□□□□ -0.42
SPIDR-222ENST00000524006 MROH7-TTC4A0A0A0MT08 1334 aa12.44□□□□□ -0.42
SPIDR-222ENST00000524006 USP17L12C9JPN9 530 aa12.44□□□□□ -0.42
SPIDR-222ENST00000524006 USP17L21D6R901 530 aa12.44□□□□□ -0.42
SPIDR-222ENST00000524006 GOLGA6L19H0YKK7 550 aa12.44□□□□□ -0.42
SPIDR-222ENST00000524006 ORC4O43929 436 aa12.44□□□□□ -0.42
SPIDR-222ENST00000524006 CDC27P30260 824 aa12.44□□□□□ -0.42
SPIDR-222ENST00000524006 KIF5BP33176 963 aa12.44□□□□□ -0.42
SPIDR-222ENST00000524006 DDR1Q08345 913 aa12.44□□□□□ -0.42
SPIDR-222ENST00000524006 CRY2Q49AN0 593 aa12.44□□□□□ -0.42
SPIDR-222ENST00000524006 CKAP2LQ8IYA6 745 aa12.44□□□□□ -0.42
SPIDR-222ENST00000524006 TDRD7Q8NHU6 1098 aaKnown RBP12.44□□□□□ -0.42
SPIDR-222ENST00000524006 FAM200AQ8TCP9 573 aa12.44□□□□□ -0.42
SPIDR-222ENST00000524006 INCENPQ9NQS7 918 aa12.44□□□□□ -0.42
SPIDR-222ENST00000524006 A0A1W2PQ27 194 aa12.43□□□□□ -0.42
SPIDR-222ENST00000524006 A0A1W2PQ64 194 aa12.43□□□□□ -0.42
SPIDR-222ENST00000524006 A0A1W2PQD8 194 aa12.43□□□□□ -0.42
SPIDR-222ENST00000524006 POLRMTO00411 1230 aaKnown RBP12.43□□□□□ -0.42
SPIDR-222ENST00000524006 NR1I2O75469 434 aa12.43□□□□□ -0.42
SPIDR-222ENST00000524006 PDE6BP35913 854 aa12.43□□□□□ -0.42
SPIDR-222ENST00000524006 SBK1Q52WX2 424 aa12.43□□□□□ -0.42
SPIDR-222ENST00000524006 CTR9Q6PD62 1173 aa12.43□□□□□ -0.42
SPIDR-222ENST00000524006 ZSCAN30Q86W11 494 aa12.43□□□□□ -0.42
SPIDR-222ENST00000524006 FANCBQ8NB91 859 aa12.43□□□□□ -0.42
SPIDR-222ENST00000524006 PGBD1Q96JS3 809 aa12.43□□□□□ -0.42
SPIDR-222ENST00000524006 RNF26Q9BY78 433 aaPredicted RBP12.43□□□□□ -0.42
SPIDR-222ENST00000524006 FTOQ9C0B1 505 aaKnown RBP eCLIP12.43□□□□□ -0.42
SPIDR-222ENST00000524006 NAT10Q9H0A0 1025 aaKnown RBP12.43□□□□□ -0.42
SPIDR-222ENST00000524006 MKNK2Q9HBH9 465 aa12.43□□□□□ -0.42
SPIDR-222ENST00000524006 SENP2Q9HC62 589 aa12.43□□□□□ -0.42
SPIDR-222ENST00000524006 NMRK2Q9NPI5 230 aa12.43□□□□□ -0.42
SPIDR-222ENST00000524006 DCP1AQ9NPI6 582 aaPredicted RBP12.43□□□□□ -0.42
SPIDR-222ENST00000524006 NOL7Q9UMY1 257 aaKnown RBP12.43□□□□□ -0.42
SPIDR-222ENST00000524006 CEP131Q9UPN4 1083 aa12.43□□□□□ -0.42
SPIDR-222ENST00000524006 CYP2D7A0A087X1C5 515 aa12.42□□□□□ -0.42
SPIDR-222ENST00000524006 WTIPA6NIX2 430 aaPredicted RBP12.42□□□□□ -0.42
SPIDR-222ENST00000524006 PRDM1O75626 825 aa12.42□□□□□ -0.42
SPIDR-222ENST00000524006 TOMM70O94826 608 aa12.42□□□□□ -0.42
SPIDR-222ENST00000524006 HOXA10P31260 410 aaPredicted RBP12.42□□□□□ -0.42
SPIDR-222ENST00000524006 TPM4P67936 248 aa12.42□□□□□ -0.42
SPIDR-222ENST00000524006 ANO6Q4KMQ2 910 aa12.42□□□□□ -0.42
SPIDR-222ENST00000524006 C9orf131Q5VYM1 1079 aa12.42□□□□□ -0.42
SPIDR-222ENST00000524006 ADALQ6DHV7 355 aa12.42□□□□□ -0.42
SPIDR-222ENST00000524006 DNAJC5GQ8N7S2 189 aa12.42□□□□□ -0.42
SPIDR-222ENST00000524006 ENAHQ8N8S7 591 aaPredicted RBP12.42□□□□□ -0.42
SPIDR-222ENST00000524006 SDF4Q9BRK5 362 aa12.42□□□□□ -0.42
SPIDR-222ENST00000524006 KAT14Q9H8E8 782 aa12.42□□□□□ -0.42
SPIDR-222ENST00000524006 USP25Q9UHP3 1055 aa12.42□□□□□ -0.42
SPIDR-222ENST00000524006 HOOK1Q9UJC3 728 aaKnown RBP12.42□□□□□ -0.42
SPIDR-222ENST00000524006 ADAMTSL1Q8N6G6 1762 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 CAPN15O75808 1086 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 MMP1P03956 469 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 TPM3P06753 285 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 NPR1P16066 1061 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 BRCA1P38398 1863 aaKnown RBP12.41□□□□□ -0.42
SPIDR-222ENST00000524006 APLP1P51693 650 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 MFSD14BQ5SR56 506 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 TXNRD3Q86VQ6 643 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 TEX11Q8IYF3 940 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 CEP57L1Q8IYX8 460 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 LINC00301Q8NCQ3 95 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 CCDC34Q96HJ3 373 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 PDLIM2Q96JY6 352 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 AIFM3Q96NN9 605 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 GPR101Q96P66 508 aaPredicted RBP12.41□□□□□ -0.42
SPIDR-222ENST00000524006 EYA3Q99504 573 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 CD209Q9NNX6 404 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 ANO10Q9NW15 660 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 PIM2Q9P1W9 311 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 CLIC4Q9Y696 253 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 ROBO3Q96MS0 1386 aa12.41□□□□□ -0.42
SPIDR-222ENST00000524006 IRS2Q9Y4H2 1338 aa12.4□□□□□ -0.42
SPIDR-222ENST00000524006 BECN2A8MW95 431 aa12.4□□□□□ -0.42
SPIDR-222ENST00000524006 KIF28PB7ZC32 967 aa12.4□□□□□ -0.42
SPIDR-222ENST00000524006 ADCY5O95622 1261 aa12.4□□□□□ -0.42
SPIDR-222ENST00000524006 MYCNP04198 464 aaPredicted RBP12.4□□□□□ -0.42
SPIDR-222ENST00000524006 TSPY3P0CV98 308 aa12.4□□□□□ -0.42
SPIDR-222ENST00000524006 TSPY8P0CW00 308 aa12.4□□□□□ -0.42
SPIDR-222ENST00000524006 CHRNA5P30532 468 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms