RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 CDK8P49336 464 aa7.86□□□□□ -1.15
EFCAB13-213ENST00000523978 IKZF1Q13422 519 aa7.86□□□□□ -1.15
EFCAB13-213ENST00000523978 TTBK2Q6IQ55 1244 aa7.86□□□□□ -1.15
EFCAB13-213ENST00000523978 ASB11Q8WXH4 323 aa7.86□□□□□ -1.15
EFCAB13-213ENST00000523978 PRDM5Q9NQX1 630 aaPredicted RBP7.86□□□□□ -1.15
EFCAB13-213ENST00000523978 GNA15P30679 374 aa7.85□□□□□ -1.15
EFCAB13-213ENST00000523978 FZD5Q13467 585 aa7.85□□□□□ -1.15
EFCAB13-213ENST00000523978 SLBPQ14493 270 aaKnown RBP eCLIP7.85□□□□□ -1.15
EFCAB13-213ENST00000523978 NKG7Q16617 165 aa7.85□□□□□ -1.15
EFCAB13-213ENST00000523978 WIPI1Q5MNZ9 446 aaPredicted RBP7.85□□□□□ -1.15
EFCAB13-213ENST00000523978 ZNF648Q5T619 568 aaPredicted RBP7.85□□□□□ -1.15
EFCAB13-213ENST00000523978 TMED8Q6PL24 325 aaPredicted RBP7.85□□□□□ -1.15
EFCAB13-213ENST00000523978 HDXQ7Z353 690 aa7.85□□□□□ -1.15
EFCAB13-213ENST00000523978 FRMD6Q96NE9 622 aa7.85□□□□□ -1.15
EFCAB13-213ENST00000523978 FOXQ1Q9C009 403 aa7.85□□□□□ -1.15
EFCAB13-213ENST00000523978 MAPK8IP1Q9UQF2 711 aa7.85□□□□□ -1.15
EFCAB13-213ENST00000523978 PITPNM2Q9BZ72 1349 aa7.84□□□□□ -1.15
EFCAB13-213ENST00000523978 EIF4BP23588 611 aaKnown RBP7.84□□□□□ -1.15
EFCAB13-213ENST00000523978 CLCN7P51798 805 aa7.84□□□□□ -1.15
EFCAB13-213ENST00000523978 JAG1P78504 1218 aa7.84□□□□□ -1.15
EFCAB13-213ENST00000523978 ZP2Q05996 745 aa7.84□□□□□ -1.15
EFCAB13-213ENST00000523978 TEX2Q8IWB9 1127 aa7.84□□□□□ -1.15
EFCAB13-213ENST00000523978 WNT10AQ9GZT5 417 aa7.84□□□□□ -1.15
EFCAB13-213ENST00000523978 GZF1Q9H116 711 aaPredicted RBP7.84□□□□□ -1.15
EFCAB13-213ENST00000523978 RNF19AQ9NV58 838 aa7.84□□□□□ -1.15
EFCAB13-213ENST00000523978 CNTNAP4Q9C0A0 1308 aa7.83□□□□□ -1.16
EFCAB13-213ENST00000523978 PRR33A8MZF0 331 aa7.83□□□□□ -1.16
EFCAB13-213ENST00000523978 CCDC27Q2M243 656 aa7.83□□□□□ -1.16
EFCAB13-213ENST00000523978 FLAD1Q8NFF5 587 aa7.83□□□□□ -1.16
EFCAB13-213ENST00000523978 MIPEPQ99797 713 aa7.83□□□□□ -1.16
EFCAB13-213ENST00000523978 PRPF40AO75400 957 aaKnown RBP7.82□□□□□ -1.16
EFCAB13-213ENST00000523978 ETF1P62495 437 aaKnown RBP7.82□□□□□ -1.16
EFCAB13-213ENST00000523978 IRX6P78412 446 aaPredicted RBP7.82□□□□□ -1.16
EFCAB13-213ENST00000523978 SEPT6Q14141 434 aa7.82□□□□□ -1.16
EFCAB13-213ENST00000523978 CCDC85BQ15834 202 aaPredicted RBP7.82□□□□□ -1.16
EFCAB13-213ENST00000523978 PLCD4Q9BRC7 762 aa7.82□□□□□ -1.16
EFCAB13-213ENST00000523978 TPX2Q9ULW0 747 aaKnown RBP7.82□□□□□ -1.16
EFCAB13-213ENST00000523978 PCDHB5Q9Y5E4 795 aa7.82□□□□□ -1.16
EFCAB13-213ENST00000523978 SNCAIPQ9Y6H5 919 aa7.82□□□□□ -1.16
EFCAB13-213ENST00000523978 CLSPNQ9HAW4 1339 aa7.81□□□□□ -1.16
EFCAB13-213ENST00000523978 A0A0U1RQG5 324 aaPredicted RBP7.81□□□□□ -1.16
EFCAB13-213ENST00000523978 RBAK-RBAKDNI3L0D1 243 aa7.81□□□□□ -1.16
EFCAB13-213ENST00000523978 CAP2P40123 477 aa7.81□□□□□ -1.16
EFCAB13-213ENST00000523978 HSPA12BQ96MM6 686 aa7.81□□□□□ -1.16
EFCAB13-213ENST00000523978 PRDM16Q9HAZ2 1276 aa7.81□□□□□ -1.16
EFCAB13-213ENST00000523978 GRK4P32298 578 aa7.8□□□□□ -1.16
EFCAB13-213ENST00000523978 SFRP5Q5T4F7 317 aa7.8□□□□□ -1.16
EFCAB13-213ENST00000523978 CDKAL1Q5VV42 579 aa7.8□□□□□ -1.16
EFCAB13-213ENST00000523978 HID1Q8IV36 788 aa7.8□□□□□ -1.16
EFCAB13-213ENST00000523978 MFSD4AQ8N468 514 aa7.8□□□□□ -1.16
EFCAB13-213ENST00000523978 RIN3Q8TB24 985 aa7.8□□□□□ -1.16
EFCAB13-213ENST00000523978 TMEM40Q8WWA1 233 aa7.8□□□□□ -1.16
EFCAB13-213ENST00000523978 DUSP9Q99956 384 aaKnown RBP7.8□□□□□ -1.16
EFCAB13-213ENST00000523978 SEMA3GQ9NS98 782 aa7.8□□□□□ -1.16
EFCAB13-213ENST00000523978 AK5Q9Y6K8 562 aa7.8□□□□□ -1.16
EFCAB13-213ENST00000523978 ARID1BQ8NFD5 2236 aaPredicted RBP7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 FAM155AB1AL88 458 aaPredicted RBP7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 ZNF865P0CJ78 1059 aaPredicted RBP7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 PTMSP20962 102 aa7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 RPS26P62854 115 aaKnown RBP7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 ZNF124Q15973 351 aa7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 MAP3K11Q16584 847 aa7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 PRAMEF13Q5VWM6 474 aa7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 LETMD1Q6P1Q0 360 aa7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 C22orf34Q6ZV56 151 aa7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 ZSWIM9Q86XI8 627 aa7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 MFSD2AQ8NA29 543 aa7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 CARS2Q9HA77 564 aaKnown RBP7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 ATP13A1Q9HD20 1204 aa7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 CTNND2Q9UQB3 1225 aa7.79□□□□□ -1.16
EFCAB13-213ENST00000523978 PATL2C9JE40 543 aaKnown RBP7.78□□□□□ -1.16
EFCAB13-213ENST00000523978 GFRA2O00451 464 aa7.78□□□□□ -1.16
EFCAB13-213ENST00000523978 FARP2O94887 1054 aaPredicted RBP7.78□□□□□ -1.16
EFCAB13-213ENST00000523978 CST3P01034 146 aaPredicted RBP7.78□□□□□ -1.16
EFCAB13-213ENST00000523978 LIG3P49916 1009 aa7.78□□□□□ -1.16
EFCAB13-213ENST00000523978 AGMOQ6ZNB7 445 aa7.78□□□□□ -1.16
EFCAB13-213ENST00000523978 XAGE3Q8WTP9 111 aa7.78□□□□□ -1.16
EFCAB13-213ENST00000523978 CAPN6Q9Y6Q1 641 aa7.78□□□□□ -1.16
EFCAB13-213ENST00000523978 ANKRD33BA6NCL7 494 aa7.77□□□□□ -1.17
EFCAB13-213ENST00000523978 H3BS24 57 aa7.77□□□□□ -1.17
EFCAB13-213ENST00000523978 MAFGO15525 162 aa7.77□□□□□ -1.17
EFCAB13-213ENST00000523978 LMNB1P20700 586 aa7.77□□□□□ -1.17
EFCAB13-213ENST00000523978 MEI1Q5TIA1 1274 aa7.77□□□□□ -1.17
EFCAB13-213ENST00000523978 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.77□□□□□ -1.17
EFCAB13-213ENST00000523978 LMCD1Q9NZU5 365 aa7.77□□□□□ -1.17
EFCAB13-213ENST00000523978 ST14Q9Y5Y6 855 aa7.77□□□□□ -1.17
EFCAB13-213ENST00000523978 TFE3P19532 575 aaPredicted RBP7.76□□□□□ -1.17
EFCAB13-213ENST00000523978 KCNMB1Q16558 191 aa7.76□□□□□ -1.17
EFCAB13-213ENST00000523978 EAPPQ56P03 285 aaPredicted RBP7.76□□□□□ -1.17
EFCAB13-213ENST00000523978 DPH2Q9BQC3 489 aaPredicted RBP7.76□□□□□ -1.17
EFCAB13-213ENST00000523978 ZNF503-AS2A6NEH8 195 aa7.75□□□□□ -1.17
EFCAB13-213ENST00000523978 CBX7O95931 251 aa7.75□□□□□ -1.17
EFCAB13-213ENST00000523978 FYB2Q5VWT5 728 aa7.75□□□□□ -1.17
EFCAB13-213ENST00000523978 MIR1-1HGQ9H1L0 117 aa7.75□□□□□ -1.17
EFCAB13-213ENST00000523978 TJP2Q9UDY2 1190 aa7.75□□□□□ -1.17
EFCAB13-213ENST00000523978 CADPSQ9ULU8 1353 aa7.74□□□□□ -1.17
EFCAB13-213ENST00000523978 LRRC10BA6NIK2 292 aa7.74□□□□□ -1.17
EFCAB13-213ENST00000523978 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.74□□□□□ -1.17
EFCAB13-213ENST00000523978 PGRP06401 933 aa7.74□□□□□ -1.17
EFCAB13-213ENST00000523978 MESP2Q0VG99 397 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms