RNA–Protein interactions for RNA: ENST00000521806.5

GPAT4-210, Transcript of glycerol-3-phosphate acyltransferase 4, human

TSL 5

Gene GPAT4, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPAT4-210	ENST00000521806	PNMA3	Q9UL41	463 aa		13.06	□□□□□ -0.32
GPAT4-210	ENST00000521806	TAOK2	Q9UL54	1235 aa		13.06	□□□□□ -0.32
GPAT4-210	ENST00000521806	NR2E3	Q9Y5X4	410 aa		13.06	□□□□□ -0.32
GPAT4-210	ENST00000521806	HIP1	O00291	1037 aa		13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	FARP2	O94887	1054 aa	Predicted RBP	13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	SGPL1	O95470	568 aa		13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	GSTO1	P78417	241 aa		13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	MAP3K10	Q02779	954 aa		13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	GORAB	Q5T7V8	394 aa		13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	PXYLP1	Q8TE99	480 aa		13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	COA7	Q96BR5	231 aa		13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	XAGE2	Q96GT9	111 aa		13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	BOLA2	Q9H3K6	86 aa		13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	SNRK	Q9NRH2	765 aa		13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	RBM27	Q9P2N5	1060 aa	Known RBP	13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	AGTPBP1	Q9UPW5	1226 aa		13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	DOCK1	Q14185	1865 aa		13.05	□□□□□ -0.32
GPAT4-210	ENST00000521806	MGAM	O43451	1857 aa		13.04	□□□□□ -0.32
GPAT4-210	ENST00000521806	GPR75-ASB3	A0A0A6YYF3	556 aa		13.04	□□□□□ -0.32
GPAT4-210	ENST00000521806	SGSM2	O43147	1006 aa		13.04	□□□□□ -0.32
GPAT4-210	ENST00000521806	MAP4K4	O95819	1239 aa	Predicted RBP	13.04	□□□□□ -0.32
GPAT4-210	ENST00000521806	TFRC	P02786	760 aa	Known RBP	13.04	□□□□□ -0.32
GPAT4-210	ENST00000521806	INHA	P05111	366 aa		13.04	□□□□□ -0.32
GPAT4-210	ENST00000521806	SLURP2	P0DP57	97 aa		13.04	□□□□□ -0.32
GPAT4-210	ENST00000521806	ELN	P15502	786 aa		13.04	□□□□□ -0.32
GPAT4-210	ENST00000521806	CAPN2	P17655	700 aa		13.04	□□□□□ -0.32
GPAT4-210	ENST00000521806	UBE2Q1	Q7Z7E8	422 aa		13.04	□□□□□ -0.32
GPAT4-210	ENST00000521806	ANKRD13C	Q8N6S4	541 aa		13.04	□□□□□ -0.32
GPAT4-210	ENST00000521806	IL17RA	Q96F46	866 aa		13.04	□□□□□ -0.32
GPAT4-210	ENST00000521806	KIF2C	Q99661	725 aa		13.04	□□□□□ -0.32
GPAT4-210	ENST00000521806	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.04	□□□□□ -0.32
GPAT4-210	ENST00000521806	TBC1D12	O60347	775 aa		13.03	□□□□□ -0.32
GPAT4-210	ENST00000521806	EVI5	O60447	810 aa		13.03	□□□□□ -0.32
GPAT4-210	ENST00000521806	LDHC	P07864	332 aa		13.03	□□□□□ -0.32
GPAT4-210	ENST00000521806	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.03	□□□□□ -0.32
GPAT4-210	ENST00000521806	IRF5	Q13568	498 aa		13.03	□□□□□ -0.32
GPAT4-210	ENST00000521806	CCDC84	Q86UT8	332 aa	Predicted RBP	13.03	□□□□□ -0.32
GPAT4-210	ENST00000521806	SPATA5	Q8NB90	893 aa		13.03	□□□□□ -0.32
GPAT4-210	ENST00000521806	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.03	□□□□□ -0.32
GPAT4-210	ENST00000521806	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.03	□□□□□ -0.32
GPAT4-210	ENST00000521806	RAI14	Q9P0K7	980 aa		13.03	□□□□□ -0.32
GPAT4-210	ENST00000521806	FAM196B	A6NMK8	535 aa		13.02	□□□□□ -0.33
GPAT4-210	ENST00000521806	NPM3	O75607	178 aa	Known RBP	13.02	□□□□□ -0.33
GPAT4-210	ENST00000521806	RHBDL3	P58872	404 aa		13.02	□□□□□ -0.33
GPAT4-210	ENST00000521806	SPP2	Q13103	211 aa		13.02	□□□□□ -0.33
GPAT4-210	ENST00000521806	FAM110C	Q1W6H9	321 aa		13.02	□□□□□ -0.33
GPAT4-210	ENST00000521806	CCDC158	Q5M9N0	1113 aa		13.02	□□□□□ -0.33
GPAT4-210	ENST00000521806	TREML2	Q5T2D2	321 aa		13.02	□□□□□ -0.33
GPAT4-210	ENST00000521806	RUFY2	Q8WXA3	655 aa		13.02	□□□□□ -0.33
GPAT4-210	ENST00000521806	DEFB118	Q96PH6	123 aa		13.02	□□□□□ -0.33
GPAT4-210	ENST00000521806	NOL10	Q9BSC4	688 aa	Known RBP	13.02	□□□□□ -0.33
GPAT4-210	ENST00000521806	TBC1D2	Q9BYX2	928 aa		13.02	□□□□□ -0.33
GPAT4-210	ENST00000521806	HMG20B	Q9P0W2	317 aa		13.02	□□□□□ -0.33
GPAT4-210	ENST00000521806	GCLC	P48506	637 aa	Predicted RBP	13.01	□□□□□ -0.33
GPAT4-210	ENST00000521806	KBTBD3	Q8NAB2	608 aa		13.01	□□□□□ -0.33
GPAT4-210	ENST00000521806	ZNF280C	Q8ND82	737 aa		13.01	□□□□□ -0.33
GPAT4-210	ENST00000521806	NSUN4	Q96CB9	384 aa	Known RBP	13.01	□□□□□ -0.33
GPAT4-210	ENST00000521806	LRP2BP	Q9P2M1	347 aa		13.01	□□□□□ -0.33
GPAT4-210	ENST00000521806	RAD50	Q92878	1312 aa		13.01	□□□□□ -0.33
GPAT4-210	ENST00000521806	PHIP	Q8WWQ0	1821 aa		13.01	□□□□□ -0.33
GPAT4-210	ENST00000521806	PTPRF	P10586	1907 aa		13	□□□□□ -0.33
GPAT4-210	ENST00000521806	COL2A1	P02458	1487 aa	Predicted RBP	13	□□□□□ -0.33
GPAT4-210	ENST00000521806	CAP2	P40123	477 aa		13	□□□□□ -0.33
GPAT4-210	ENST00000521806	HMGCS2	P54868	508 aa		13	□□□□□ -0.33
GPAT4-210	ENST00000521806	PI16	Q6UXB8	463 aa		13	□□□□□ -0.33
GPAT4-210	ENST00000521806	TEX11	Q8IYF3	940 aa		13	□□□□□ -0.33
GPAT4-210	ENST00000521806	IL27	Q8NEV9	243 aa		13	□□□□□ -0.33
GPAT4-210	ENST00000521806	ZNF384	Q8TF68	577 aa		13	□□□□□ -0.33
GPAT4-210	ENST00000521806	SNX21	Q969T3	373 aa		13	□□□□□ -0.33
GPAT4-210	ENST00000521806	IL25	Q9H293	177 aa		13	□□□□□ -0.33
GPAT4-210	ENST00000521806	AS3MT	Q9HBK9	375 aa		13	□□□□□ -0.33
GPAT4-210	ENST00000521806	PAK6	Q9NQU5	681 aa	Predicted RBP	13	□□□□□ -0.33
GPAT4-210	ENST00000521806	DIAPH3	Q9NSV4	1193 aa		13	□□□□□ -0.33
GPAT4-210	ENST00000521806	USP17L5	A8MUK1	530 aa		12.99	□□□□□ -0.33
GPAT4-210	ENST00000521806	BAG3	O95817	575 aa		12.99	□□□□□ -0.33
GPAT4-210	ENST00000521806	UQCRFS1P1	P0C7P4	283 aa		12.99	□□□□□ -0.33
GPAT4-210	ENST00000521806	ARID4A	P29374	1257 aa	Predicted RBP	12.99	□□□□□ -0.33
GPAT4-210	ENST00000521806	ANAPC15	P60006	121 aa		12.99	□□□□□ -0.33
GPAT4-210	ENST00000521806	FSD1	Q9BTV5	496 aa		12.99	□□□□□ -0.33
GPAT4-210	ENST00000521806	TRIM34	Q9BYJ4	488 aa		12.99	□□□□□ -0.33
GPAT4-210	ENST00000521806	LSG1	Q9H089	658 aa	Known RBP	12.99	□□□□□ -0.33
GPAT4-210	ENST00000521806	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	12.99	□□□□□ -0.33
GPAT4-210	ENST00000521806	PAG1	Q9NWQ8	432 aa		12.99	□□□□□ -0.33
GPAT4-210	ENST00000521806	HERC5	Q9UII4	1024 aa	Known RBP	12.99	□□□□□ -0.33
GPAT4-210	ENST00000521806	HMGCR	P04035	888 aa		12.98	□□□□□ -0.33
GPAT4-210	ENST00000521806	NMI	Q13287	307 aa	Predicted RBP	12.98	□□□□□ -0.33
GPAT4-210	ENST00000521806	BECN1	Q14457	450 aa		12.98	□□□□□ -0.33
GPAT4-210	ENST00000521806	TTC39A	Q5SRH9	613 aa		12.98	□□□□□ -0.33
GPAT4-210	ENST00000521806	CWC27	Q6UX04	472 aa	Known RBP	12.98	□□□□□ -0.33
GPAT4-210	ENST00000521806	NECAB2	Q7Z6G3	386 aa		12.98	□□□□□ -0.33
GPAT4-210	ENST00000521806	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	12.98	□□□□□ -0.33
GPAT4-210	ENST00000521806	KCNB2	Q92953	911 aa		12.98	□□□□□ -0.33
GPAT4-210	ENST00000521806	EDC3	Q96F86	508 aa	Known RBP	12.98	□□□□□ -0.33
GPAT4-210	ENST00000521806	PAWR	Q96IZ0	340 aa	Known RBP	12.98	□□□□□ -0.33
GPAT4-210	ENST00000521806	ASCC2	Q9H1I8	757 aa	Predicted RBP	12.98	□□□□□ -0.33
GPAT4-210	ENST00000521806	DHX36	Q9H2U1	1008 aa	Known RBP	12.98	□□□□□ -0.33
GPAT4-210	ENST00000521806	TMOD4	Q9NZQ9	345 aa		12.98	□□□□□ -0.33
GPAT4-210	ENST00000521806	PI4KB	Q9UBF8	816 aa		12.98	□□□□□ -0.33
GPAT4-210	ENST00000521806	LOC285556	D6RIA3	1793 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms