RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 DHX57Q6P158 1386 aaKnown RBP9.59□□□□□ -0.87
SPIDR-215ENST00000521798 PIK3C2GO75747 1445 aa9.58□□□□□ -0.88
SPIDR-215ENST00000521798 ALKQ9UM73 1620 aa9.58□□□□□ -0.88
SPIDR-215ENST00000521798 GJB6O95452 261 aa9.58□□□□□ -0.88
SPIDR-215ENST00000521798 THBS1P07996 1170 aa9.58□□□□□ -0.88
SPIDR-215ENST00000521798 MASP1P48740 699 aa9.58□□□□□ -0.88
SPIDR-215ENST00000521798 SCARF1Q14162 830 aa9.58□□□□□ -0.88
SPIDR-215ENST00000521798 TKFCQ3LXA3 575 aa9.58□□□□□ -0.88
SPIDR-215ENST00000521798 TRIM67Q6ZTA4 783 aa9.58□□□□□ -0.88
SPIDR-215ENST00000521798 TYW1Q9NV66 732 aaKnown RBP9.58□□□□□ -0.88
SPIDR-215ENST00000521798 SUGT1Q9Y2Z0 365 aa9.58□□□□□ -0.88
SPIDR-215ENST00000521798 SETD1AO15047 1707 aaKnown RBP9.58□□□□□ -0.88
SPIDR-215ENST00000521798 MYOM2P54296 1465 aa9.58□□□□□ -0.88
SPIDR-215ENST00000521798 NRXN1Q9ULB1 1477 aa9.58□□□□□ -0.88
SPIDR-215ENST00000521798 XIRP1Q702N8 1843 aaKnown RBP9.57□□□□□ -0.88
SPIDR-215ENST00000521798 BPNT1O95861 308 aa9.57□□□□□ -0.88
SPIDR-215ENST00000521798 MAPTP10636 758 aaKnown RBP9.57□□□□□ -0.88
SPIDR-215ENST00000521798 NME2P22392 152 aa9.57□□□□□ -0.88
SPIDR-215ENST00000521798 UBAP2LQ14157 1087 aaKnown RBP9.57□□□□□ -0.88
SPIDR-215ENST00000521798 C19orf47Q8N9M1 422 aaKnown RBP9.57□□□□□ -0.88
SPIDR-215ENST00000521798 PBX4Q9BYU1 374 aa9.57□□□□□ -0.88
SPIDR-215ENST00000521798 MUC3BQ9H195 1237 aa9.57□□□□□ -0.88
SPIDR-215ENST00000521798 EHMT1Q9H9B1 1298 aa9.57□□□□□ -0.88
SPIDR-215ENST00000521798 MARK1Q9P0L2 795 aa9.57□□□□□ -0.88
SPIDR-215ENST00000521798 CHPF2Q9P2E5 772 aa9.57□□□□□ -0.88
SPIDR-215ENST00000521798 XRN1Q8IZH2 1706 aaKnown RBP9.56□□□□□ -0.88
SPIDR-215ENST00000521798 S100BP04271 92 aaPredicted RBP9.56□□□□□ -0.88
SPIDR-215ENST00000521798 VIL1P09327 827 aaKnown RBP9.56□□□□□ -0.88
SPIDR-215ENST00000521798 ZNF157P51786 506 aaPredicted RBP9.56□□□□□ -0.88
SPIDR-215ENST00000521798 GPLD1P80108 840 aa9.56□□□□□ -0.88
SPIDR-215ENST00000521798 LRRC14Q15048 493 aa9.56□□□□□ -0.88
SPIDR-215ENST00000521798 BHMTQ93088 406 aa9.56□□□□□ -0.88
SPIDR-215ENST00000521798 GAL3ST3Q96A11 431 aa9.56□□□□□ -0.88
SPIDR-215ENST00000521798 RASSF4Q9H2L5 321 aa9.56□□□□□ -0.88
SPIDR-215ENST00000521798 CLEC4MQ9H2X3 399 aaPredicted RBP9.56□□□□□ -0.88
SPIDR-215ENST00000521798 SENP3-EIF4A1A0A087X0R7 540 aa9.55□□□□□ -0.88
SPIDR-215ENST00000521798 EIF5BO60841 1220 aaKnown RBP9.55□□□□□ -0.88
SPIDR-215ENST00000521798 TCEA2Q15560 299 aa9.55□□□□□ -0.88
SPIDR-215ENST00000521798 LLGL2Q6P1M3 1020 aa9.55□□□□□ -0.88
SPIDR-215ENST00000521798 SYNPOQ8N3V7 929 aa9.55□□□□□ -0.88
SPIDR-215ENST00000521798 ST13P5Q8NFI4 369 aaPredicted RBP9.55□□□□□ -0.88
SPIDR-215ENST00000521798 SLC30A3Q99726 388 aa9.55□□□□□ -0.88
SPIDR-215ENST00000521798 HCN2Q9UL51 889 aa9.55□□□□□ -0.88
SPIDR-215ENST00000521798 PTCH2Q9Y6C5 1203 aa9.55□□□□□ -0.88
SPIDR-215ENST00000521798 ASXL1Q8IXJ9 1541 aa9.55□□□□□ -0.88
SPIDR-215ENST00000521798 PRAG1Q86YV5 1406 aa9.55□□□□□ -0.88
SPIDR-215ENST00000521798 KDM2BQ8NHM5 1336 aa9.55□□□□□ -0.88
SPIDR-215ENST00000521798 LOC102724428A0A0B4J2F2 783 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 DIAPH1O60610 1272 aaKnown RBP9.54□□□□□ -0.88
SPIDR-215ENST00000521798 TOM1O60784 492 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 ATE1O95260 518 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 B3GALT4O96024 378 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 PDGFRBP09619 1106 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 SIK1P57059 783 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 ATP11AP98196 1134 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 PPP2R5EQ16537 467 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 HSP90AB2PQ58FF8 381 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 SULF2Q8IWU5 870 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 DCAF11Q8TEB1 546 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 ZNF669Q96BR6 464 aaPredicted RBP9.54□□□□□ -0.88
SPIDR-215ENST00000521798 SIN3AQ96ST3 1273 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 PCGF6Q9BYE7 350 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 NDFIP2Q9NV92 336 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 DNMT3LQ9UJW3 386 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 PCDHB14Q9Y5E9 798 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 PTCH1Q13635 1447 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 NCOA3Q9Y6Q9 1424 aa9.54□□□□□ -0.88
SPIDR-215ENST00000521798 A0A0G2JS52 829 aa9.53□□□□□ -0.88
SPIDR-215ENST00000521798 DDAH1O94760 285 aa9.53□□□□□ -0.88
SPIDR-215ENST00000521798 HCLS1P14317 486 aaPredicted RBP9.53□□□□□ -0.88
SPIDR-215ENST00000521798 RPL6Q02878 288 aaKnown RBP9.53□□□□□ -0.88
SPIDR-215ENST00000521798 PCDH1Q08174 1060 aa9.53□□□□□ -0.88
SPIDR-215ENST00000521798 SPATC1Q76KD6 591 aa9.53□□□□□ -0.88
SPIDR-215ENST00000521798 RAB44Q7Z6P3 723 aaPredicted RBP9.53□□□□□ -0.88
SPIDR-215ENST00000521798 BSNDQ8WZ55 320 aa9.53□□□□□ -0.88
SPIDR-215ENST00000521798 C14orf93Q9H972 538 aaKnown RBP9.53□□□□□ -0.88
SPIDR-215ENST00000521798 PFDN2Q9UHV9 154 aa9.53□□□□□ -0.88
SPIDR-215ENST00000521798 ZMYM5Q9UJ78 669 aa9.53□□□□□ -0.88
SPIDR-215ENST00000521798 MSH6P52701 1360 aa9.52□□□□□ -0.88
SPIDR-215ENST00000521798 B2RBV5 119 aa9.52□□□□□ -0.89
SPIDR-215ENST00000521798 BNIP3LO60238 219 aa9.52□□□□□ -0.89
SPIDR-215ENST00000521798 PIP4K2BP78356 416 aa9.52□□□□□ -0.89
SPIDR-215ENST00000521798 SSRP1Q08945 709 aaKnown RBP9.52□□□□□ -0.89
SPIDR-215ENST00000521798 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.52□□□□□ -0.89
SPIDR-215ENST00000521798 SCARA3Q6AZY7 606 aa9.52□□□□□ -0.89
SPIDR-215ENST00000521798 TMEM132EQ6IEE7 984 aa9.52□□□□□ -0.89
SPIDR-215ENST00000521798 KRT26Q7Z3Y9 468 aa9.52□□□□□ -0.89
SPIDR-215ENST00000521798 STK35Q8TDR2 534 aa9.52□□□□□ -0.89
SPIDR-215ENST00000521798 POP1Q99575 1024 aaKnown RBP9.52□□□□□ -0.89
SPIDR-215ENST00000521798 NUCKS1Q9H1E3 243 aaKnown RBP9.52□□□□□ -0.89
SPIDR-215ENST00000521798 PLAAQ9Y263 795 aa9.52□□□□□ -0.89
SPIDR-215ENST00000521798 POLR3KQ9Y2Y1 108 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-215ENST00000521798 LRPPRCP42704 1394 aaKnown RBP9.51□□□□□ -0.89
SPIDR-215ENST00000521798 TECPR2O15040 1411 aa9.51□□□□□ -0.89
SPIDR-215ENST00000521798 A0A1W2PQH9 124 aa9.51□□□□□ -0.89
SPIDR-215ENST00000521798 ZBTB42B2RXF5 422 aa9.51□□□□□ -0.89
SPIDR-215ENST00000521798 BMP1P13497 986 aa9.51□□□□□ -0.89
SPIDR-215ENST00000521798 ARNTP27540 789 aa9.51□□□□□ -0.89
SPIDR-215ENST00000521798 DALRD3Q5D0E6 543 aaKnown RBP9.51□□□□□ -0.89
SPIDR-215ENST00000521798 C6orf15Q6UXA7 325 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms