RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 NIP7Q9Y221 180 aaKnown RBP eCLIP7.92□□□□□ -1.14
CTNNA1-228ENST00000521640 KIF3AQ9Y496 699 aa7.92□□□□□ -1.14
CTNNA1-228ENST00000521640 PDS5AQ29RF7 1337 aaKnown RBP7.92□□□□□ -1.14
CTNNA1-228ENST00000521640 ESPNB1AK53 854 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 F13A1P00488 732 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 SYT1P21579 422 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 ADORA1P30542 326 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 MCAMP43121 646 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 HMGN5P82970 282 aaKnown RBP7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 ALX1Q15699 326 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 IMMTQ16891 758 aaKnown RBP7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 PPP1R26Q5T8A7 1209 aaPredicted RBP7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 CCDC102BQ68D86 513 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 CCDC116Q8IYX3 515 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 LINC00116Q8NCU8 138 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 GTF3C6Q969F1 213 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 C8orf37Q96NL8 207 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 CDV3Q9UKY7 258 aaKnown RBP7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 TPCN1Q9ULQ1 816 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 ZNF804BA4D1E1 1349 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 DUOX1Q9NRD9 1551 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 C4AP0C0L4 1744 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 C4BP0C0L5 1744 aa7.91□□□□□ -1.14
CTNNA1-228ENST00000521640 ELP1O95163 1332 aa7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 PFKFB2O60825 505 aa7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 LARGE1O95461 756 aa7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 NCLP19338 710 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 GJB2P29033 226 aa7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 ZAP70P43403 619 aa7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 EXOSC10Q01780 885 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 FKBP4Q02790 459 aaKnown RBP eCLIP7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 VAC14Q08AM6 782 aa7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 ST3GAL1Q11201 340 aa7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 UBE4AQ14139 1066 aa7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 CCDC83Q8IWF9 413 aa7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 OSBP2Q969R2 916 aa7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 ZNF274Q96GC6 653 aaPredicted RBP7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 SEC62Q99442 399 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 MTA3Q9BTC8 594 aa7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 MTMR6Q9Y217 621 aa7.9□□□□□ -1.14
CTNNA1-228ENST00000521640 MAST2Q6P0Q8 1798 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 KIAA1551Q9HCM1 1747 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 PNPLA7Q6ZV29 1317 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 E7EWF7 191 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 M0R2C6 588 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 GPAA1O43292 621 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 KCNQ2O43526 872 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 LETM1O95202 739 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 CPA1P15085 419 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 GNAT2P19087 354 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 NT5C2P49902 561 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 UBE2HP62256 183 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 MAP3K12Q12852 859 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 SCARF1Q14162 830 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 NBPF20Q3BBV1 942 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 ZNF787Q6DD87 383 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 ATL3Q6DD88 541 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 CCDC129Q6ZRS4 1044 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 NOL8Q76FK4 1167 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 SYNE4Q8N205 404 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 SPATA5Q8NB90 893 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 SMARCC2Q8TAQ2 1214 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 GRPEL1Q9HAV7 217 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 PRM3Q9NNZ6 103 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 TMPRSS4Q9NRS4 437 aa7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 BSDC1Q9NW68 430 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 TRPC5Q9UL62 973 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-228ENST00000521640 TCRBV5S4A2TA0A5A2 114 aa7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 ERVH48-1M5A8F1 160 aa7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 FOXP2O15409 715 aa7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 DHX16O60231 1041 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 PRPF40AO75400 957 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 HCLS1P14317 486 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 PDE6AP16499 860 aa7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 MCM5P33992 734 aa7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 PHKA1P46020 1223 aa7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 WASHC4Q2M389 1173 aa7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 ZSCAN23Q3MJ62 389 aa7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 NAA16Q6N069 864 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 Q6ZUG5 572 aa7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 STOX1Q6ZVD7 989 aa7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 ANKRD18AQ8IVF6 992 aa7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 NCOA7Q8NI08 942 aa7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 ZSCAN16Q9H4T2 348 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 GNL3LQ9NVN8 582 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 RTCBQ9Y3I0 505 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-228ENST00000521640 NID2Q14112 1375 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 SALL1Q9NSC2 1324 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 ZNF213O14771 459 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 FGAP02671 866 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 PCP11498 1178 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 XRCC6P12956 609 aaKnown RBP eCLIP7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 RCAN1P53805 252 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 CHRNDQ07001 517 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 CBLBQ13191 982 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 RASGRF1Q13972 1273 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 SLC27A3Q5K4L6 730 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 SLC9C2Q5TAH2 1124 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 LARP1BQ659C4 914 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 MB21D2Q8IYB1 491 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms