RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 CHD6Q8TD26 2715 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 A0A0G2JMZ2 1700 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 PLXNA3P51805 1871 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.65□□□□□ -1.34
SDC2-206ENST00000521590 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.65□□□□□ -1.34
SDC2-206ENST00000521590 ERC2O15083 957 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 MYO1BO43795 1136 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 DIAPH1O60610 1272 aaKnown RBP6.65□□□□□ -1.34
SDC2-206ENST00000521590 NR1I2O75469 434 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 EIF4A1P60842 406 aaKnown RBP6.65□□□□□ -1.34
SDC2-206ENST00000521590 GTF2IP78347 998 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 PPATQ06203 517 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 FOXC1Q12948 553 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 DCTN1Q14203 1278 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 TAF7Q15545 349 aaPredicted RBP6.65□□□□□ -1.34
SDC2-206ENST00000521590 PROSER3Q2NL68 480 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 CFAP100Q494V2 611 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 KCNV2Q8TDN2 545 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 TIFAQ96CG3 184 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 SENP6Q9GZR1 1112 aaPredicted RBP6.65□□□□□ -1.34
SDC2-206ENST00000521590 TMEM39BQ9GZU3 492 aa6.65□□□□□ -1.34
SDC2-206ENST00000521590 WDR87Q6ZQQ6 2873 aa6.65□□□□□ -1.35
SDC2-206ENST00000521590 ZFHX2Q9C0A1 2572 aaPredicted RBP6.64□□□□□ -1.35
SDC2-206ENST00000521590 IGFBP4P22692 258 aa6.64□□□□□ -1.35
SDC2-206ENST00000521590 ITGB8P26012 769 aa6.64□□□□□ -1.35
SDC2-206ENST00000521590 RTP1P59025 263 aa6.64□□□□□ -1.35
SDC2-206ENST00000521590 HSP90AB3PQ58FF7 597 aa6.64□□□□□ -1.35
SDC2-206ENST00000521590 SH3RF1Q7Z6J0 888 aa6.64□□□□□ -1.35
SDC2-206ENST00000521590 TRIB2Q92519 343 aa6.64□□□□□ -1.35
SDC2-206ENST00000521590 COA7Q96BR5 231 aa6.64□□□□□ -1.35
SDC2-206ENST00000521590 RNPC3Q96LT9 517 aaKnown RBP6.64□□□□□ -1.35
SDC2-206ENST00000521590 UIMC1Q96RL1 719 aa6.64□□□□□ -1.35
SDC2-206ENST00000521590 PARK7Q99497 189 aaKnown RBP6.64□□□□□ -1.35
SDC2-206ENST00000521590 ZNF70Q9UC06 446 aaPredicted RBP6.64□□□□□ -1.35
SDC2-206ENST00000521590 PRKAG2Q9UGJ0 569 aa6.64□□□□□ -1.35
SDC2-206ENST00000521590 TRIM43BA6NCK2 446 aa6.63□□□□□ -1.35
SDC2-206ENST00000521590 ANXA1P04083 346 aa6.63□□□□□ -1.35
SDC2-206ENST00000521590 MYH3P11055 1940 aa6.63□□□□□ -1.35
SDC2-206ENST00000521590 PRRC2BQ5JSZ5 2229 aaKnown RBP6.63□□□□□ -1.35
SDC2-206ENST00000521590 COPS6Q7L5N1 327 aa6.63□□□□□ -1.35
SDC2-206ENST00000521590 TRIM43Q96BQ3 446 aaPredicted RBP6.63□□□□□ -1.35
SDC2-206ENST00000521590 WRNIP1Q96S55 665 aa6.63□□□□□ -1.35
SDC2-206ENST00000521590 PBX4Q9BYU1 374 aa6.63□□□□□ -1.35
SDC2-206ENST00000521590 TDRD3Q9H7E2 651 aaKnown RBP6.63□□□□□ -1.35
SDC2-206ENST00000521590 A0A1B0GUL6 1792 aa6.62□□□□□ -1.35
SDC2-206ENST00000521590 F8W031 263 aaPredicted RBP6.62□□□□□ -1.35
SDC2-206ENST00000521590 IRS4O14654 1257 aaPredicted RBP6.62□□□□□ -1.35
SDC2-206ENST00000521590 KLRK1P26718 216 aa6.62□□□□□ -1.35
SDC2-206ENST00000521590 CCND3P30281 292 aaPredicted RBP6.62□□□□□ -1.35
SDC2-206ENST00000521590 CCT4P50991 539 aaKnown RBP6.62□□□□□ -1.35
SDC2-206ENST00000521590 CACNB2Q08289 660 aaPredicted RBP6.62□□□□□ -1.35
SDC2-206ENST00000521590 TNFAIP1Q13829 316 aa6.62□□□□□ -1.35
SDC2-206ENST00000521590 RTL5Q5HYW3 569 aaPredicted RBP6.62□□□□□ -1.35
SDC2-206ENST00000521590 CRIPAKQ8N1N5 446 aa6.62□□□□□ -1.35
SDC2-206ENST00000521590 SPSB2Q99619 263 aa6.62□□□□□ -1.35
SDC2-206ENST00000521590 ISCA1Q9BUE6 129 aa6.62□□□□□ -1.35
SDC2-206ENST00000521590 PANK3Q9H999 370 aa6.62□□□□□ -1.35
SDC2-206ENST00000521590 PDLIM7Q9NR12 457 aa6.62□□□□□ -1.35
SDC2-206ENST00000521590 DAGLAQ9Y4D2 1042 aa6.62□□□□□ -1.35
SDC2-206ENST00000521590 CHD8Q9HCK8 2581 aa6.61□□□□□ -1.35
SDC2-206ENST00000521590 GRXCR1A8MXD5 290 aa6.61□□□□□ -1.35
SDC2-206ENST00000521590 TCP10L2B9ZVM9 353 aa6.61□□□□□ -1.35
SDC2-206ENST00000521590 INPP5BP32019 993 aa6.61□□□□□ -1.35
SDC2-206ENST00000521590 PRSS33Q8NF86 280 aa6.61□□□□□ -1.35
SDC2-206ENST00000521590 TOR4AQ9NXH8 423 aa6.61□□□□□ -1.35
SDC2-206ENST00000521590 GMPR2Q9P2T1 348 aaKnown RBP6.61□□□□□ -1.35
SDC2-206ENST00000521590 MINPP1Q9UNW1 487 aa6.61□□□□□ -1.35
SDC2-206ENST00000521590 ATP11BQ9Y2G3 1177 aa6.61□□□□□ -1.35
SDC2-206ENST00000521590 KMT2EQ8IZD2 1858 aa6.61□□□□□ -1.35
SDC2-206ENST00000521590 SETXQ7Z333 2677 aaKnown RBP6.61□□□□□ -1.35
SDC2-206ENST00000521590 RPAP1Q9BWH6 1393 aaPredicted RBP6.6□□□□□ -1.35
SDC2-206ENST00000521590 AVPP01185 164 aa6.6□□□□□ -1.35
SDC2-206ENST00000521590 AIMP1Q12904 312 aaKnown RBP6.6□□□□□ -1.35
SDC2-206ENST00000521590 KCTD2Q14681 263 aa6.6□□□□□ -1.35
SDC2-206ENST00000521590 SNX17Q15036 470 aa6.6□□□□□ -1.35
SDC2-206ENST00000521590 SLC39A5Q6ZMH5 540 aa6.6□□□□□ -1.35
SDC2-206ENST00000521590 ANKRD13CQ8N6S4 541 aa6.6□□□□□ -1.35
SDC2-206ENST00000521590 XAGE3Q8WTP9 111 aa6.6□□□□□ -1.35
SDC2-206ENST00000521590 HERVK_113Q902F9 699 aa6.6□□□□□ -1.35
SDC2-206ENST00000521590 RTF1Q92541 710 aaKnown RBP6.6□□□□□ -1.35
SDC2-206ENST00000521590 THAP11Q96EK4 314 aa6.6□□□□□ -1.35
SDC2-206ENST00000521590 RSPH6AQ9H0K4 717 aa6.6□□□□□ -1.35
SDC2-206ENST00000521590 CD209Q9NNX6 404 aa6.6□□□□□ -1.35
SDC2-206ENST00000521590 PRDM5Q9NQX1 630 aaPredicted RBP6.6□□□□□ -1.35
SDC2-206ENST00000521590 ATP5J2-PTCD1G3V325 749 aa6.59□□□□□ -1.35
SDC2-206ENST00000521590 CXCL11O14625 94 aa6.59□□□□□ -1.35
SDC2-206ENST00000521590 U2SURPO15042 1029 aaKnown RBP6.59□□□□□ -1.35
SDC2-206ENST00000521590 HTATSF1O43719 755 aaKnown RBP6.59□□□□□ -1.35
SDC2-206ENST00000521590 POU3F3P20264 500 aaPredicted RBP6.59□□□□□ -1.35
SDC2-206ENST00000521590 PRKAR2BP31323 418 aa6.59□□□□□ -1.35
SDC2-206ENST00000521590 RPIAP49247 311 aa6.59□□□□□ -1.35
SDC2-206ENST00000521590 RBM5P52756 815 aaKnown RBP eCLIP6.59□□□□□ -1.35
SDC2-206ENST00000521590 FKBP1AP62942 108 aaKnown RBP6.59□□□□□ -1.35
SDC2-206ENST00000521590 COL9A2Q14055 689 aaPredicted RBP6.59□□□□□ -1.35
SDC2-206ENST00000521590 CSPP1Q1MSJ5 1256 aa6.59□□□□□ -1.35
SDC2-206ENST00000521590 RASIP1Q5U651 963 aa6.59□□□□□ -1.35
SDC2-206ENST00000521590 HFE2Q6ZVN8 426 aa6.59□□□□□ -1.35
SDC2-206ENST00000521590 ANKRD18AQ8IVF6 992 aa6.59□□□□□ -1.35
SDC2-206ENST00000521590 FAM160A2Q8N612 972 aaPredicted RBP6.59□□□□□ -1.35
SDC2-206ENST00000521590 TSHZ2Q9NRE2 1034 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms