RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ZNF280CQ8ND82 737 aa24.83■■□□□ 1.57
TRIM35-203ENST00000521253 TBC1D2Q9BYX2 928 aa24.83■■□□□ 1.57
TRIM35-203ENST00000521253 MCOLN1Q9GZU1 580 aa24.83■■□□□ 1.57
TRIM35-203ENST00000521253 GINM1Q9NU53 330 aa24.83■■□□□ 1.57
TRIM35-203ENST00000521253 ZBTB21Q9ULJ3 1066 aa24.83■■□□□ 1.57
TRIM35-203ENST00000521253 M0R2C6 588 aa24.82■■□□□ 1.56
TRIM35-203ENST00000521253 SHMT1P34896 483 aa24.82■■□□□ 1.56
TRIM35-203ENST00000521253 GPAA1O43292 621 aa24.81■■□□□ 1.56
TRIM35-203ENST00000521253 GADL1Q6ZQY3 521 aa24.81■■□□□ 1.56
TRIM35-203ENST00000521253 EVI5LQ96CN4 794 aa24.81■■□□□ 1.56
TRIM35-203ENST00000521253 AS3MTQ9HBK9 375 aa24.81■■□□□ 1.56
TRIM35-203ENST00000521253 PHIPQ8WWQ0 1821 aa24.81■■□□□ 1.56
TRIM35-203ENST00000521253 CYP2D7A0A087X1C5 515 aa24.8■■□□□ 1.56
TRIM35-203ENST00000521253 USP17L12C9JPN9 530 aa24.8■■□□□ 1.56
TRIM35-203ENST00000521253 USP17L21D6R901 530 aa24.8■■□□□ 1.56
TRIM35-203ENST00000521253 TLR2O60603 784 aa24.8■■□□□ 1.56
TRIM35-203ENST00000521253 GH2P01242 217 aa24.8■■□□□ 1.56
TRIM35-203ENST00000521253 CERKLQ49MI3 558 aaPredicted RBP24.8■■□□□ 1.56
TRIM35-203ENST00000521253 PLEKHM2Q8IWE5 1019 aa24.8■■□□□ 1.56
TRIM35-203ENST00000521253 DDRGK1Q96HY6 314 aa24.8■■□□□ 1.56
TRIM35-203ENST00000521253 SEC62Q99442 399 aaKnown RBP24.8■■□□□ 1.56
TRIM35-203ENST00000521253 WDR18Q9BV38 432 aa24.8■■□□□ 1.56
TRIM35-203ENST00000521253 GSG1L2A8MUP6 293 aa24.79■■□□□ 1.56
TRIM35-203ENST00000521253 SP3Q02447 781 aa24.79■■□□□ 1.56
TRIM35-203ENST00000521253 ZMYM1Q5SVZ6 1142 aa24.79■■□□□ 1.56
TRIM35-203ENST00000521253 C12orf60Q5U649 245 aa24.79■■□□□ 1.56
TRIM35-203ENST00000521253 DYNLL2Q96FJ2 89 aa24.79■■□□□ 1.56
TRIM35-203ENST00000521253 ABHD8Q96I13 439 aa24.79■■□□□ 1.56
TRIM35-203ENST00000521253 ATAD5Q96QE3 1844 aa24.79■■□□□ 1.56
TRIM35-203ENST00000521253 SMIM22K7EJ46 135 aa24.78■■□□□ 1.56
TRIM35-203ENST00000521253 HMGCS2P54868 508 aa24.78■■□□□ 1.56
TRIM35-203ENST00000521253 CTR9Q6PD62 1173 aa24.78■■□□□ 1.56
TRIM35-203ENST00000521253 AMOTL1Q8IY63 956 aa24.78■■□□□ 1.56
TRIM35-203ENST00000521253 SLC44A5Q8NCS7 719 aa24.78■■□□□ 1.56
TRIM35-203ENST00000521253 OSBPL3Q9H4L5 887 aa24.78■■□□□ 1.56
TRIM35-203ENST00000521253 ABCB5Q2M3G0 1257 aa24.77■■□□□ 1.56
TRIM35-203ENST00000521253 CD99L2Q8TCZ2 262 aa24.77■■□□□ 1.56
TRIM35-203ENST00000521253 PARK7Q99497 189 aaKnown RBP24.77■■□□□ 1.56
TRIM35-203ENST00000521253 SWAP70Q9UH65 585 aa24.77■■□□□ 1.56
TRIM35-203ENST00000521253 AGTPBP1Q9UPW5 1226 aa24.77■■□□□ 1.56
TRIM35-203ENST00000521253 CYP2C8P10632 490 aa24.76■■□□□ 1.55
TRIM35-203ENST00000521253 GNAT2P19087 354 aa24.76■■□□□ 1.55
TRIM35-203ENST00000521253 BACE1P56817 501 aa24.76■■□□□ 1.55
TRIM35-203ENST00000521253 MTMR2Q13614 643 aa24.76■■□□□ 1.55
TRIM35-203ENST00000521253 SH3D19Q5HYK7 790 aa24.76■■□□□ 1.55
TRIM35-203ENST00000521253 TREML2Q5T2D2 321 aa24.76■■□□□ 1.55
TRIM35-203ENST00000521253 GIMAP6Q6P9H5 292 aa24.76■■□□□ 1.55
TRIM35-203ENST00000521253 PROCA1Q8NCQ7 364 aaPredicted RBP24.76■■□□□ 1.55
TRIM35-203ENST00000521253 ERO1AQ96HE7 468 aa24.76■■□□□ 1.55
TRIM35-203ENST00000521253 TAOK2Q9UL54 1235 aa24.76■■□□□ 1.55
TRIM35-203ENST00000521253 SLC45A1Q9Y2W3 748 aa24.76■■□□□ 1.55
TRIM35-203ENST00000521253 ADGRA2Q96PE1 1338 aa24.76■■□□□ 1.55
TRIM35-203ENST00000521253 TRIM6-TRIM34B2RNG4 842 aa24.75■■□□□ 1.55
TRIM35-203ENST00000521253 RAB3GAP1Q15042 981 aa24.75■■□□□ 1.55
TRIM35-203ENST00000521253 C17orf99Q6UX52 265 aa24.75■■□□□ 1.55
TRIM35-203ENST00000521253 EPB41L4AQ9HCS5 686 aaPredicted RBP24.75■■□□□ 1.55
TRIM35-203ENST00000521253 CABP5Q9NP86 173 aa24.75■■□□□ 1.55
TRIM35-203ENST00000521253 ARPP21Q9UBL0 812 aaPredicted RBP24.75■■□□□ 1.55
TRIM35-203ENST00000521253 PTPRFP10586 1907 aa24.74■■□□□ 1.55
TRIM35-203ENST00000521253 USP17L10C9JJH3 530 aa24.74■■□□□ 1.55
TRIM35-203ENST00000521253 CAPN15O75808 1086 aa24.74■■□□□ 1.55
TRIM35-203ENST00000521253 GUCY1A2P33402 732 aa24.74■■□□□ 1.55
TRIM35-203ENST00000521253 CAP1Q01518 475 aa24.74■■□□□ 1.55
TRIM35-203ENST00000521253 CPA4Q9UI42 421 aa24.74■■□□□ 1.55
TRIM35-203ENST00000521253 BAZ2AQ9UIF9 1905 aaKnown RBP24.74■■□□□ 1.55
TRIM35-203ENST00000521253 PATL2C9JE40 543 aaKnown RBP24.73■■□□□ 1.55
TRIM35-203ENST00000521253 APPP05067 770 aa24.73■■□□□ 1.55
TRIM35-203ENST00000521253 PDE4AP27815 886 aa24.73■■□□□ 1.55
TRIM35-203ENST00000521253 CDK8P49336 464 aa24.73■■□□□ 1.55
TRIM35-203ENST00000521253 PKN2Q16513 984 aaKnown RBP24.73■■□□□ 1.55
TRIM35-203ENST00000521253 SBK1Q52WX2 424 aa24.73■■□□□ 1.55
TRIM35-203ENST00000521253 C16orf86Q6ZW13 317 aa24.73■■□□□ 1.55
TRIM35-203ENST00000521253 TRIM17Q9Y577 477 aa24.73■■□□□ 1.55
TRIM35-203ENST00000521253 C19orf81C9J6K1 198 aa24.72■■□□□ 1.55
TRIM35-203ENST00000521253 MPHOSPH10O00566 681 aaKnown RBP24.72■■□□□ 1.55
TRIM35-203ENST00000521253 TDO2P48775 406 aa24.72■■□□□ 1.55
TRIM35-203ENST00000521253 CCDC129Q6ZRS4 1044 aa24.72■■□□□ 1.55
TRIM35-203ENST00000521253 OTOP1Q7RTM1 612 aa24.72■■□□□ 1.55
TRIM35-203ENST00000521253 RILPL2Q969X0 211 aa24.72■■□□□ 1.55
TRIM35-203ENST00000521253 HTTP42858 3142 aa24.72■■□□□ 1.55
TRIM35-203ENST00000521253 SEPT2Q15019 361 aa24.71■■□□□ 1.55
TRIM35-203ENST00000521253 TICAM2Q86XR7 235 aa24.71■■□□□ 1.55
TRIM35-203ENST00000521253 IFNL3Q8IZI9 196 aa24.71■■□□□ 1.55
TRIM35-203ENST00000521253 TMOD4Q9NZQ9 345 aa24.71■■□□□ 1.55
TRIM35-203ENST00000521253 MINDY4BA8MYZ0 360 aa24.7■■□□□ 1.54
TRIM35-203ENST00000521253 AKR1B1P15121 316 aa24.7■■□□□ 1.54
TRIM35-203ENST00000521253 LACTBP83111 547 aaPredicted RBP24.7■■□□□ 1.54
TRIM35-203ENST00000521253 ACER1Q8TDN7 264 aa24.7■■□□□ 1.54
TRIM35-203ENST00000521253 FAM227BQ96M60 508 aa24.7■■□□□ 1.54
TRIM35-203ENST00000521253 FEZ1Q99689 392 aa24.7■■□□□ 1.54
TRIM35-203ENST00000521253 EFCC1Q9HA90 598 aa24.7■■□□□ 1.54
TRIM35-203ENST00000521253 HELLSQ9NRZ9 838 aa24.7■■□□□ 1.54
TRIM35-203ENST00000521253 EMILIN3Q9NT22 766 aa24.7■■□□□ 1.54
TRIM35-203ENST00000521253 PNMA3Q9UL41 463 aa24.7■■□□□ 1.54
TRIM35-203ENST00000521253 LOC285556D6RIA3 1793 aa24.7■■□□□ 1.54
TRIM35-203ENST00000521253 A0A0D9SFI3 127 aa24.69■■□□□ 1.54
TRIM35-203ENST00000521253 BCRP11274 1271 aa24.69■■□□□ 1.54
TRIM35-203ENST00000521253 PABPC4Q13310 644 aaKnown RBP eCLIP24.69■■□□□ 1.54
TRIM35-203ENST00000521253 USP17L2Q6R6M4 530 aa24.69■■□□□ 1.54
TRIM35-203ENST00000521253 TMEM179Q6ZVK1 233 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms