RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 GDF6Q6KF10 455 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-208ENST00000521037 ADAMTSL4Q6UY14 1074 aa5.76□□□□□ -1.49
VPS13B-208ENST00000521037 CDK19Q9BWU1 502 aa5.76□□□□□ -1.49
VPS13B-208ENST00000521037 POGKQ9P215 609 aa5.76□□□□□ -1.49
VPS13B-208ENST00000521037 SBF1O95248 1867 aa5.76□□□□□ -1.49
VPS13B-208ENST00000521037 THSD7BQ9C0I4 1608 aa5.76□□□□□ -1.49
VPS13B-208ENST00000521037 PLEKHG2Q9H7P9 1386 aa5.76□□□□□ -1.49
VPS13B-208ENST00000521037 FAM208AQ9UK61 1670 aaKnown RBP5.75□□□□□ -1.49
VPS13B-208ENST00000521037 C4BP0C0L5 1744 aa5.75□□□□□ -1.49
VPS13B-208ENST00000521037 A6NJR5 290 aa5.75□□□□□ -1.49
VPS13B-208ENST00000521037 RAD21O60216 631 aa5.75□□□□□ -1.49
VPS13B-208ENST00000521037 XYLBO75191 536 aa5.75□□□□□ -1.49
VPS13B-208ENST00000521037 DPEP1P16444 411 aa5.75□□□□□ -1.49
VPS13B-208ENST00000521037 DTX1Q86Y01 620 aa5.75□□□□□ -1.49
VPS13B-208ENST00000521037 KCNK4Q9NYG8 393 aa5.75□□□□□ -1.49
VPS13B-208ENST00000521037 STOML1Q9UBI4 398 aa5.75□□□□□ -1.49
VPS13B-208ENST00000521037 CCNL1Q9UK58 526 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-208ENST00000521037 TRIM33Q9UPN9 1127 aa5.75□□□□□ -1.49
VPS13B-208ENST00000521037 MAP2P11137 1827 aaKnown RBP5.75□□□□□ -1.49
VPS13B-208ENST00000521037 ARFGEF1Q9Y6D6 1849 aa5.75□□□□□ -1.49
VPS13B-208ENST00000521037 HTTP42858 3142 aa5.75□□□□□ -1.49
VPS13B-208ENST00000521037 LTBP1Q14766 1721 aa5.74□□□□□ -1.49
VPS13B-208ENST00000521037 FAM196BA6NMK8 535 aa5.74□□□□□ -1.49
VPS13B-208ENST00000521037 PDIA4P13667 645 aaKnown RBP5.74□□□□□ -1.49
VPS13B-208ENST00000521037 ARID4AP29374 1257 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-208ENST00000521037 NFIAQ12857 509 aa5.74□□□□□ -1.49
VPS13B-208ENST00000521037 ARHGAP27Q6ZUM4 889 aa5.74□□□□□ -1.49
VPS13B-208ENST00000521037 ANKMY2Q8IV38 441 aa5.74□□□□□ -1.49
VPS13B-208ENST00000521037 FAM46AQ96IP4 442 aaKnown RBP5.74□□□□□ -1.49
VPS13B-208ENST00000521037 SPTBN5Q9NRC6 3674 aaKnown RBP5.73□□□□□ -1.49
VPS13B-208ENST00000521037 ZBTB7CA1YPR0 619 aa5.73□□□□□ -1.49
VPS13B-208ENST00000521037 CCDC85CA6NKD9 419 aa5.73□□□□□ -1.49
VPS13B-208ENST00000521037 PSAPP07602 524 aa5.73□□□□□ -1.49
VPS13B-208ENST00000521037 IL2RBP14784 551 aa5.73□□□□□ -1.49
VPS13B-208ENST00000521037 GLB1P16278 677 aa5.73□□□□□ -1.49
VPS13B-208ENST00000521037 TGFB2P61812 414 aa5.73□□□□□ -1.49
VPS13B-208ENST00000521037 FAM26DQ5JW98 314 aa5.73□□□□□ -1.49
VPS13B-208ENST00000521037 KIAA1211Q6ZU35 1233 aa5.73□□□□□ -1.49
VPS13B-208ENST00000521037 TREML1Q86YW5 311 aa5.73□□□□□ -1.49
VPS13B-208ENST00000521037 CACTIN-AS1Q8N1I8 211 aa5.73□□□□□ -1.49
VPS13B-208ENST00000521037 NSUN5Q96P11 429 aaKnown RBP5.73□□□□□ -1.49
VPS13B-208ENST00000521037 RNF114Q9Y508 228 aa5.73□□□□□ -1.49
VPS13B-208ENST00000521037 PPME1Q9Y570 386 aa5.73□□□□□ -1.49
VPS13B-208ENST00000521037 KDM2BQ8NHM5 1336 aa5.73□□□□□ -1.49
VPS13B-208ENST00000521037 BRCA2P51587 3418 aa5.73□□□□□ -1.49
VPS13B-208ENST00000521037 GLTPD2A6NH11 291 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 USP17L15C9J2P7 530 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 USP17L10C9JJH3 530 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 USP17L13C9JLJ4 530 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 USP17L12C9JPN9 530 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 USP17L11C9JVI0 530 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 USP17L21D6R901 530 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 USP17L18D6R9N7 530 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 USP17L22D6RA61 530 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 USP17L17D6RBQ6 530 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 USP17L19D6RCP7 530 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 USP17L20D6RJB6 530 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 DHX15O43143 795 aaKnown RBP5.72□□□□□ -1.49
VPS13B-208ENST00000521037 USP17L24Q0WX57 530 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 FZD5Q13467 585 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 TRIP4Q15650 581 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-208ENST00000521037 COX20Q5RI15 118 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 RNF43Q68DV7 783 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 INTS5Q6P9B9 1019 aaKnown RBP5.72□□□□□ -1.49
VPS13B-208ENST00000521037 TRIM42Q8IWZ5 723 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 RGL4Q8IZJ4 473 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 CMTR1Q8N1G2 835 aaKnown RBP5.72□□□□□ -1.49
VPS13B-208ENST00000521037 DCAF11Q8TEB1 546 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 GLMNQ92990 594 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 PPP1R12CQ9BZL4 782 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 MUC3BQ9H195 1237 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 C7orf69Q9H7B7 122 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 ADGRE2Q9UHX3 823 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 PDE4DIPQ5VU43 2346 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 MEGF6O75095 1541 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 ADAMTSL1Q8N6G6 1762 aa5.72□□□□□ -1.49
VPS13B-208ENST00000521037 RANBP2P49792 3224 aaKnown RBP5.71□□□□□ -1.49
VPS13B-208ENST00000521037 HMX2A2RU54 273 aa5.71□□□□□ -1.5
VPS13B-208ENST00000521037 PTCD1O75127 700 aaKnown RBP5.71□□□□□ -1.5
VPS13B-208ENST00000521037 GHRHP01286 108 aa5.71□□□□□ -1.5
VPS13B-208ENST00000521037 VEGFAP15692 232 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-208ENST00000521037 ITGAEP38570 1179 aa5.71□□□□□ -1.5
VPS13B-208ENST00000521037 UVSSAQ2YD98 709 aa5.71□□□□□ -1.5
VPS13B-208ENST00000521037 C16orf71Q8IYS4 520 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-208ENST00000521037 LINC00116Q8NCU8 138 aa5.71□□□□□ -1.5
VPS13B-208ENST00000521037 OR13H1Q8NG92 308 aa5.71□□□□□ -1.5
VPS13B-208ENST00000521037 RNF181Q9P0P0 153 aa5.71□□□□□ -1.5
VPS13B-208ENST00000521037 RASSF10A6NK89 507 aa5.7□□□□□ -1.5
VPS13B-208ENST00000521037 LINC01387J3KSC0 135 aa5.7□□□□□ -1.5
VPS13B-208ENST00000521037 MMP10P09238 476 aa5.7□□□□□ -1.5
VPS13B-208ENST00000521037 CD68P34810 354 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-208ENST00000521037 ETFBKMTQ8IXQ9 262 aa5.7□□□□□ -1.5
VPS13B-208ENST00000521037 CCDC82Q8N4S0 544 aa5.7□□□□□ -1.5
VPS13B-208ENST00000521037 MYRFLQ96LU7 910 aa5.7□□□□□ -1.5
VPS13B-208ENST00000521037 MCOLN1Q9GZU1 580 aa5.7□□□□□ -1.5
VPS13B-208ENST00000521037 UNC80Q8N2C7 3258 aa5.7□□□□□ -1.5
VPS13B-208ENST00000521037 C4AP0C0L4 1744 aa5.7□□□□□ -1.5
VPS13B-208ENST00000521037 TTC21BQ7Z4L5 1316 aa5.7□□□□□ -1.5
VPS13B-208ENST00000521037 ADAMTS7Q9UKP4 1686 aa5.69□□□□□ -1.5
VPS13B-208ENST00000521037 USP31Q70CQ4 1352 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms