RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 PPP2R2CQ9Y2T4 447 aa12.96□□□□□ -0.34
NUDCD1-203ENST00000519607 BCORQ6W2J9 1755 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 TMEM232C9JQI7 657 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 UBE2Q2LH0YL09 131 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 FOXN1O15353 648 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 PRKAB2O43741 272 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 H2AFXP16104 143 aaPredicted RBP12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 BMP6P22004 513 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 FAM193AP78312 1265 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 PDE4BQ07343 736 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 ARHGAP29Q52LW3 1261 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 TRIM65Q6PJ69 517 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 REXO1L1PQ8IX06 675 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 BRMS1Q9HCU9 246 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 CABP5Q9NP86 173 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 PCDHB6Q9Y5E3 794 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 TRIM75PA6NK02 468 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 EFCAB8A8MWE9 144 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 ZNF18P17022 549 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 ATP2B1P20020 1258 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 CASQ1P31415 396 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 BCAMP50895 628 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 PLCD1P51178 756 aa12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 TBX2Q13207 712 aaPredicted RBP12.95□□□□□ -0.34
NUDCD1-203ENST00000519607 MINDY4BA8MYZ0 360 aa12.94□□□□□ -0.34
NUDCD1-203ENST00000519607 CYP7A1P22680 504 aa12.94□□□□□ -0.34
NUDCD1-203ENST00000519607 NR5A1Q13285 461 aa12.94□□□□□ -0.34
NUDCD1-203ENST00000519607 SUSD4Q5VX71 490 aa12.94□□□□□ -0.34
NUDCD1-203ENST00000519607 MIGA1Q8NAN2 632 aa12.94□□□□□ -0.34
NUDCD1-203ENST00000519607 AATFQ9NY61 560 aaKnown RBP eCLIP12.94□□□□□ -0.34
NUDCD1-203ENST00000519607 MAGEB6P1A0A0J9YX57 407 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 KRT2P35908 639 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 TMCO3Q6UWJ1 677 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 CATIPQ7Z7H3 387 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 CTAGE1Q96RT6 745 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 CDC5LQ99459 802 aaKnown RBP12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 CSRNP2Q9H175 543 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 RBM28Q9NW13 759 aaKnown RBP12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 FAM53CQ9NYF3 392 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 RAI14Q9P0K7 980 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 ANAPC4Q9UJX5 808 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 TACC3Q9Y6A5 838 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 ACTN4O43707 911 aaKnown RBP12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 CALM1P0DP23 149 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 CALM2P0DP24 149 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 CALM3P0DP25 149 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 HSP90AA4PQ58FG1 418 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 IQCA1Q86XH1 822 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 TMEM139Q8IV31 216 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 CMTR1Q8N1G2 835 aaKnown RBP12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 FERMT2Q96AC1 680 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 SEC31BQ9NQW1 1179 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 TNKSO95271 1327 aa12.93□□□□□ -0.34
NUDCD1-203ENST00000519607 PCP11498 1178 aaKnown RBP12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 EIF5P55010 431 aaKnown RBP12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 GNG11P61952 73 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 GRIN1Q05586 938 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 FMR1Q06787 632 aaKnown RBP eCLIP12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 FILIP1LQ4L180 1135 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 CREBRFQ8IUR6 639 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 TC2NQ8N9U0 490 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 SPATA20Q8TB22 786 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 NAA15Q9BXJ9 866 aaKnown RBP12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 INTS13Q9NVM9 706 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 ABCF2Q9UG63 623 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 MYH2Q9UKX2 1941 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 VWA3AA6NCI4 1184 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 SNAP23O00161 211 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 PRPF3O43395 683 aaKnown RBP12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 CLCN6P51797 869 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 NR1I3Q14994 352 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 TERF2Q15554 542 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 IFIT1BQ5T764 474 aaKnown RBP12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 TAF3Q5VWG9 929 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 PPFIBP1Q86W92 1011 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 FAM177A1Q8N128 213 aaPredicted RBP12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 DHX58Q96C10 678 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 ZSCAN10Q96SZ4 725 aaPredicted RBP12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 PYM1Q9BRP8 204 aaKnown RBP12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 CCDC87Q9NVE4 849 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 PARP3Q9Y6F1 533 aa12.92□□□□□ -0.34
NUDCD1-203ENST00000519607 AKR1B15C9JRZ8 316 aaPredicted RBP12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 CCDC175P0C221 793 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 SLFN14P0C7P3 912 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 ADKP55263 362 aaKnown RBP12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 CHRNDQ07001 517 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 GOLGA8FQ08AF8 430 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 GOLGA8DPQ0D2H9 430 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 SEC23AQ15436 765 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 SPATA1Q5VX52 437 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 TRMT44Q8IYL2 757 aaKnown RBP12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 OXER1Q8TDS5 423 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 GSDMAQ96QA5 445 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 PANX2Q96RD6 677 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 PLCH1Q4KWH8 1693 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 DISP2A7MBM2 1401 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 A0A1B0GTH6 734 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 ATP8B1O43520 1251 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms