RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 SUSD4Q5VX71 490 aa11.51□□□□□ -0.57
MTCL1-207ENST00000518815 ENGASEQ8NFI3 743 aa11.51□□□□□ -0.57
MTCL1-207ENST00000518815 RBM28Q9NW13 759 aaKnown RBP11.51□□□□□ -0.57
MTCL1-207ENST00000518815 CCDC194A0A1B0GVG4 234 aa11.51□□□□□ -0.57
MTCL1-207ENST00000518815 PRDM1O75626 825 aa11.51□□□□□ -0.57
MTCL1-207ENST00000518815 IFNAR1P17181 557 aa11.51□□□□□ -0.57
MTCL1-207ENST00000518815 U2AF2P26368 475 aaKnown RBP eCLIP11.51□□□□□ -0.57
MTCL1-207ENST00000518815 RXRBP28702 533 aa11.51□□□□□ -0.57
MTCL1-207ENST00000518815 NDUFA8P51970 172 aa11.51□□□□□ -0.57
MTCL1-207ENST00000518815 UBE4AQ14139 1066 aa11.51□□□□□ -0.57
MTCL1-207ENST00000518815 TBC1D10CQ8IV04 446 aa11.51□□□□□ -0.57
MTCL1-207ENST00000518815 PYM1Q9BRP8 204 aaKnown RBP11.51□□□□□ -0.57
MTCL1-207ENST00000518815 GOLPH3LQ9H4A5 285 aa11.51□□□□□ -0.57
MTCL1-207ENST00000518815 FMNL1O95466 1100 aaPredicted RBP11.5□□□□□ -0.57
MTCL1-207ENST00000518815 SKILP12757 684 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 PFKFB1P16118 471 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 MARCKSP29966 332 aaPredicted RBP11.5□□□□□ -0.57
MTCL1-207ENST00000518815 COL9A3Q14050 684 aaPredicted RBP11.5□□□□□ -0.57
MTCL1-207ENST00000518815 CFAP100Q494V2 611 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 VGLL2Q8N8G2 317 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 STAG1Q8WVM7 1258 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 FTOQ9C0B1 505 aaKnown RBP eCLIP11.5□□□□□ -0.57
MTCL1-207ENST00000518815 GPHNQ9NQX3 736 aaPredicted RBP11.5□□□□□ -0.57
MTCL1-207ENST00000518815 HPS5Q9UPZ3 1129 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 MYH3P11055 1940 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 SEMA3EO15041 775 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 FGFR2P21802 821 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 RASGRF1Q13972 1273 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 IQCB1Q15051 598 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 SYNE4Q8N205 404 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 MAGEC2Q9UBF1 373 aaPredicted RBP11.5□□□□□ -0.57
MTCL1-207ENST00000518815 PYCARDQ9ULZ3 195 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 ZNF76P36508 570 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 NT5C2P49902 561 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 C11orf57Q6ZUT1 292 aaPredicted RBP11.5□□□□□ -0.57
MTCL1-207ENST00000518815 ANKRD2Q9GZV1 360 aa11.5□□□□□ -0.57
MTCL1-207ENST00000518815 C4BP0C0L5 1744 aa11.49□□□□□ -0.57
MTCL1-207ENST00000518815 NARFQ9UHQ1 456 aa11.49□□□□□ -0.57
MTCL1-207ENST00000518815 LAMB2P55268 1798 aa11.49□□□□□ -0.57
MTCL1-207ENST00000518815 IKBKBO14920 756 aa11.49□□□□□ -0.57
MTCL1-207ENST00000518815 TSPY3P0CV98 308 aa11.49□□□□□ -0.57
MTCL1-207ENST00000518815 TSPY8P0CW00 308 aa11.49□□□□□ -0.57
MTCL1-207ENST00000518815 SNW1Q13573 536 aaKnown RBP11.49□□□□□ -0.57
MTCL1-207ENST00000518815 KIF18AQ8NI77 898 aa11.49□□□□□ -0.57
MTCL1-207ENST00000518815 MYL5Q02045 173 aa11.49□□□□□ -0.57
MTCL1-207ENST00000518815 CTDSPL2Q05D32 466 aa11.49□□□□□ -0.57
MTCL1-207ENST00000518815 CHRNDQ07001 517 aa11.49□□□□□ -0.57
MTCL1-207ENST00000518815 CEP135Q66GS9 1140 aa11.49□□□□□ -0.57
MTCL1-207ENST00000518815 CYB5R4Q7L1T6 521 aa11.49□□□□□ -0.57
MTCL1-207ENST00000518815 NOSTRINQ8IVI9 506 aa11.49□□□□□ -0.57
MTCL1-207ENST00000518815 FOXP1Q9H334 677 aaPredicted RBP11.49□□□□□ -0.57
MTCL1-207ENST00000518815 A0A0G2JLW4 131 aa11.48□□□□□ -0.57
MTCL1-207ENST00000518815 KIF5BP33176 963 aa11.48□□□□□ -0.57
MTCL1-207ENST00000518815 PPARAQ07869 468 aa11.48□□□□□ -0.57
MTCL1-207ENST00000518815 CCDC178Q5BJE1 867 aa11.48□□□□□ -0.57
MTCL1-207ENST00000518815 TMC6Q7Z403 805 aa11.48□□□□□ -0.57
MTCL1-207ENST00000518815 PHKBQ93100 1093 aa11.48□□□□□ -0.57
MTCL1-207ENST00000518815 LY9Q9HBG7 655 aa11.48□□□□□ -0.57
MTCL1-207ENST00000518815 LDHBP07195 334 aaKnown RBP11.48□□□□□ -0.57
MTCL1-207ENST00000518815 STIM1Q13586 685 aa11.48□□□□□ -0.57
MTCL1-207ENST00000518815 ZNF804AQ7Z570 1209 aa11.48□□□□□ -0.57
MTCL1-207ENST00000518815 LRRC8AQ8IWT6 810 aa11.48□□□□□ -0.57
MTCL1-207ENST00000518815 DIS3L2Q8IYB7 885 aaKnown RBP11.48□□□□□ -0.57
MTCL1-207ENST00000518815 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.48□□□□□ -0.57
MTCL1-207ENST00000518815 KCNH3Q9ULD8 1083 aa11.48□□□□□ -0.57
MTCL1-207ENST00000518815 HIBADHP31937 336 aaKnown RBP11.48□□□□□ -0.57
MTCL1-207ENST00000518815 TRMT1LQ7Z2T5 733 aaKnown RBP11.48□□□□□ -0.57
MTCL1-207ENST00000518815 SMARCE1Q969G3 411 aa11.48□□□□□ -0.57
MTCL1-207ENST00000518815 RIOK3O14730 519 aaKnown RBP11.47□□□□□ -0.57
MTCL1-207ENST00000518815 IGDCC4Q8TDY8 1250 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 ZSWIM5Q9P217 1185 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 RGPD3A6NKT7 1758 aaPredicted RBP11.47□□□□□ -0.57
MTCL1-207ENST00000518815 RGPD4Q7Z3J3 1758 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 UFL1O94874 794 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 GTF2F1P35269 517 aaKnown RBP eCLIP11.47□□□□□ -0.57
MTCL1-207ENST00000518815 BCAMP50895 628 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 ZNF654Q8IZM8 581 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 BBXQ8WY36 941 aaPredicted RBP11.47□□□□□ -0.57
MTCL1-207ENST00000518815 UBN2Q6ZU65 1347 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 CCDC66A2RUB6 948 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 TRIM75PA6NK02 468 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 GSTO1P78417 241 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 PPFIBP1Q86W92 1011 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 SMAP1Q8IYB5 467 aaPredicted RBP11.47□□□□□ -0.57
MTCL1-207ENST00000518815 MYL10Q9BUA6 226 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 RNF26Q9BY78 433 aaPredicted RBP11.47□□□□□ -0.57
MTCL1-207ENST00000518815 TANGO6Q9C0B7 1094 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 KCNF1Q9H3M0 494 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 IFNKQ9P0W0 207 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 NEDD4P46934 1319 aa11.47□□□□□ -0.57
MTCL1-207ENST00000518815 TCRBV5S4A2TA0A5A2 114 aa11.46□□□□□ -0.57
MTCL1-207ENST00000518815 PLSCR1O15162 318 aa11.46□□□□□ -0.57
MTCL1-207ENST00000518815 POLR3GO15318 223 aaPredicted RBP11.46□□□□□ -0.57
MTCL1-207ENST00000518815 TOP1P11387 765 aaKnown RBP11.46□□□□□ -0.57
MTCL1-207ENST00000518815 FANCBQ8NB91 859 aa11.46□□□□□ -0.57
MTCL1-207ENST00000518815 SEC31BQ9NQW1 1179 aa11.46□□□□□ -0.57
MTCL1-207ENST00000518815 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.46□□□□□ -0.57
MTCL1-207ENST00000518815 GSG1L2A8MUP6 293 aa11.46□□□□□ -0.57
MTCL1-207ENST00000518815 AP5Z1O43299 807 aa11.46□□□□□ -0.57
MTCL1-207ENST00000518815 HLA-DOAP06340 250 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms