RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 STRIP2Q9ULQ0 834 aa5.94□□□□□ -1.46
VPS13B-207ENST00000518569 PCDHB14Q9Y5E9 798 aa5.94□□□□□ -1.46
VPS13B-207ENST00000518569 CORINQ9Y5Q5 1042 aa5.94□□□□□ -1.46
VPS13B-207ENST00000518569 HMX2A2RU54 273 aa5.93□□□□□ -1.46
VPS13B-207ENST00000518569 GRIN3BO60391 1043 aa5.93□□□□□ -1.46
VPS13B-207ENST00000518569 LRIG2O94898 1065 aa5.93□□□□□ -1.46
VPS13B-207ENST00000518569 CST3P01034 146 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-207ENST00000518569 RANGAP1P46060 587 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-207ENST00000518569 ARID5AQ03989 594 aa5.93□□□□□ -1.46
VPS13B-207ENST00000518569 RNF43Q68DV7 783 aa5.93□□□□□ -1.46
VPS13B-207ENST00000518569 MFSD2AQ8NA29 543 aa5.93□□□□□ -1.46
VPS13B-207ENST00000518569 ACSF2Q96CM8 615 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-207ENST00000518569 FBRSQ9HAH7 460 aa5.93□□□□□ -1.46
VPS13B-207ENST00000518569 C1GALT1Q9NS00 363 aa5.93□□□□□ -1.46
VPS13B-207ENST00000518569 ZNRF3Q9ULT6 936 aa5.93□□□□□ -1.46
VPS13B-207ENST00000518569 EFR3BQ9Y2G0 817 aa5.93□□□□□ -1.46
VPS13B-207ENST00000518569 MEIS3P2A8K0S8 358 aa5.92□□□□□ -1.46
VPS13B-207ENST00000518569 HYAL3O43820 417 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-207ENST00000518569 YARSP54577 528 aaKnown RBP5.92□□□□□ -1.46
VPS13B-207ENST00000518569 NKG7Q16617 165 aa5.92□□□□□ -1.46
VPS13B-207ENST00000518569 GK5Q6ZS86 529 aa5.92□□□□□ -1.46
VPS13B-207ENST00000518569 UBE3DQ7Z6J8 389 aa5.92□□□□□ -1.46
VPS13B-207ENST00000518569 ZAR1Q86SH2 424 aa5.92□□□□□ -1.46
VPS13B-207ENST00000518569 SLFN12Q8IYM2 578 aa5.92□□□□□ -1.46
VPS13B-207ENST00000518569 RBBP8NLQ8NC74 664 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-207ENST00000518569 TMEM87BQ96K49 555 aa5.92□□□□□ -1.46
VPS13B-207ENST00000518569 FOXQ1Q9C009 403 aa5.92□□□□□ -1.46
VPS13B-207ENST00000518569 GMIPQ9P107 970 aa5.92□□□□□ -1.46
VPS13B-207ENST00000518569 SLC22A31A6NKX4 558 aa5.91□□□□□ -1.46
VPS13B-207ENST00000518569 DYNC1LI2O43237 492 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-207ENST00000518569 IGLV1-40P01703 118 aa5.91□□□□□ -1.46
VPS13B-207ENST00000518569 NASPP49321 788 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-207ENST00000518569 NFIAQ12857 509 aa5.91□□□□□ -1.46
VPS13B-207ENST00000518569 CPSF6Q16630 551 aaKnown RBP eCLIP5.91□□□□□ -1.46
VPS13B-207ENST00000518569 ARMCX6Q7L4S7 300 aa5.91□□□□□ -1.46
VPS13B-207ENST00000518569 GATA6Q92908 595 aa5.91□□□□□ -1.46
VPS13B-207ENST00000518569 FERD3LQ96RJ6 166 aa5.91□□□□□ -1.46
VPS13B-207ENST00000518569 DBNDD2Q9BQY9 259 aa5.91□□□□□ -1.46
VPS13B-207ENST00000518569 FSTP19883 344 aa5.9□□□□□ -1.46
VPS13B-207ENST00000518569 CYP27A1Q02318 531 aa5.9□□□□□ -1.46
VPS13B-207ENST00000518569 CDCP2Q5VXM1 449 aa5.9□□□□□ -1.46
VPS13B-207ENST00000518569 OGFOD3Q6PK18 319 aa5.9□□□□□ -1.46
VPS13B-207ENST00000518569 FAM13CQ8NE31 585 aa5.9□□□□□ -1.46
VPS13B-207ENST00000518569 OR6P1Q8NGX9 317 aa5.9□□□□□ -1.46
VPS13B-207ENST00000518569 SRRTQ9BXP5 876 aaKnown RBP5.9□□□□□ -1.46
VPS13B-207ENST00000518569 PRDM10Q9NQV6 1147 aa5.9□□□□□ -1.46
VPS13B-207ENST00000518569 CHURC1-FNTBB4DL54 471 aa5.89□□□□□ -1.47
VPS13B-207ENST00000518569 FGRP09769 529 aa5.89□□□□□ -1.47
VPS13B-207ENST00000518569 GIPRP48546 466 aa5.89□□□□□ -1.47
VPS13B-207ENST00000518569 PRAMEF13Q5VWM6 474 aa5.89□□□□□ -1.47
VPS13B-207ENST00000518569 INTS3Q68E01 1043 aaKnown RBP5.89□□□□□ -1.47
VPS13B-207ENST00000518569 TAB3Q8N5C8 712 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-207ENST00000518569 CYB5D2Q8WUJ1 264 aa5.89□□□□□ -1.47
VPS13B-207ENST00000518569 TMEM40Q8WWA1 233 aa5.89□□□□□ -1.47
VPS13B-207ENST00000518569 TBC1D32Q96NH3 1257 aa5.89□□□□□ -1.47
VPS13B-207ENST00000518569 CRBNQ96SW2 442 aa5.89□□□□□ -1.47
VPS13B-207ENST00000518569 CNNM2Q9H8M5 875 aa5.89□□□□□ -1.47
VPS13B-207ENST00000518569 LGR6Q9HBX8 967 aa5.89□□□□□ -1.47
VPS13B-207ENST00000518569 PCMTD2Q9NV79 361 aa5.89□□□□□ -1.47
VPS13B-207ENST00000518569 PPT2Q9UMR5 302 aa5.89□□□□□ -1.47
VPS13B-207ENST00000518569 UPK3BL1B0FP48 263 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 UPK3BL2E5RIL1 263 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 TNFRSF10CO14798 259 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 DNAJA2O60884 412 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 DNAJA1P31689 397 aaKnown RBP5.88□□□□□ -1.47
VPS13B-207ENST00000518569 ADMP35318 185 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 CCNFP41002 786 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 EIF6P56537 245 aaKnown RBP5.88□□□□□ -1.47
VPS13B-207ENST00000518569 CDK5R2Q13319 367 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 SF3A1Q15459 793 aaKnown RBP5.88□□□□□ -1.47
VPS13B-207ENST00000518569 CYP27C1Q4G0S4 372 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 OVOS1Q6IE37 1185 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 CPLX3Q8WVH0 158 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 ATG4CQ96DT6 458 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 SHDQ96IW2 340 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 CCDC74BQ96LY2 380 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 MFSD14AQ96MC6 490 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 TM9SF2Q99805 663 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.88□□□□□ -1.47
VPS13B-207ENST00000518569 METTL22Q9BUU2 404 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-207ENST00000518569 DUSP23Q9BVJ7 150 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 RNF112Q9ULX5 631 aa5.88□□□□□ -1.47
VPS13B-207ENST00000518569 RGS13O14921 159 aa5.87□□□□□ -1.47
VPS13B-207ENST00000518569 SLITRK5O94991 958 aa5.87□□□□□ -1.47
VPS13B-207ENST00000518569 F13BP05160 661 aa5.87□□□□□ -1.47
VPS13B-207ENST00000518569 SSBP05455 408 aaKnown RBP eCLIP5.87□□□□□ -1.47
VPS13B-207ENST00000518569 NME1P15531 152 aaKnown RBP5.87□□□□□ -1.47
VPS13B-207ENST00000518569 ARSHQ5FYA8 562 aa5.87□□□□□ -1.47
VPS13B-207ENST00000518569 DUSP27Q5VZP5 1158 aa5.87□□□□□ -1.47
VPS13B-207ENST00000518569 FBXW10Q5XX13 1052 aa5.87□□□□□ -1.47
VPS13B-207ENST00000518569 ZNF746Q6NUN9 644 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-207ENST00000518569 NLRC3Q7RTR2 1065 aa5.87□□□□□ -1.47
VPS13B-207ENST00000518569 MCF2L2Q86YR7 1114 aa5.87□□□□□ -1.47
VPS13B-207ENST00000518569 TOP6BLQ8N6T0 577 aa5.87□□□□□ -1.47
VPS13B-207ENST00000518569 SHKBP1Q8TBC3 707 aa5.87□□□□□ -1.47
VPS13B-207ENST00000518569 ARMC5Q96C12 935 aa5.87□□□□□ -1.47
VPS13B-207ENST00000518569 COX4I2Q96KJ9 171 aa5.87□□□□□ -1.47
VPS13B-207ENST00000518569 KRTAP9-2Q9BYQ4 174 aa5.87□□□□□ -1.47
VPS13B-207ENST00000518569 KLHL3Q9UH77 587 aa5.87□□□□□ -1.47
VPS13B-207ENST00000518569 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms