RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 RUSC1Q9BVN2 902 aa7.88□□□□□ -1.15
CTNNA1-202ENST00000517533 PCDHB10Q9UN67 800 aa7.88□□□□□ -1.15
CTNNA1-202ENST00000517533 R3HCC1Q9Y3T6 440 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-202ENST00000517533 SYNGAP1Q96PV0 1343 aa7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 TNFRSF10CO14798 259 aa7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 U2SURPO15042 1029 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 ADH5P11766 374 aa7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 IBSPP21815 317 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 SHISA2Q6UWI4 295 aa7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 ACAD11Q709F0 780 aa7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 NLRC3Q7RTR2 1065 aa7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 LRP10Q7Z4F1 713 aa7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 AGGF1Q8N302 714 aaeCLIP7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 SVOPQ8N4V2 548 aa7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 TAB3Q8N5C8 712 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 NEDD1Q8NHV4 660 aa7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 RAD18Q9NS91 495 aa7.87□□□□□ -1.15
CTNNA1-202ENST00000517533 MEGF11A6BM72 1044 aa7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 TPD52L2O43399 206 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 TIAF1O95411 115 aa7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 SLFN14P0C7P3 912 aa7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 ETF1P62495 437 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 TTLL4Q14679 1199 aa7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 FXNQ16595 210 aa7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 LRRFIP1Q32MZ4 808 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 TREML4Q6UXN2 200 aa7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 FAM178BQ8IXR5 827 aa7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 KLHL6Q8WZ60 621 aa7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 DPH2Q9BQC3 489 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 BRINP2Q9C0B6 783 aa7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 ADAM30Q9UKF2 790 aa7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 COL4A3BPQ9Y5P4 624 aa7.86□□□□□ -1.15
CTNNA1-202ENST00000517533 PDPK1O15530 556 aa7.85□□□□□ -1.15
CTNNA1-202ENST00000517533 DIAPH1O60610 1272 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-202ENST00000517533 ALX3O95076 343 aa7.85□□□□□ -1.15
CTNNA1-202ENST00000517533 PDE4BQ07343 736 aa7.85□□□□□ -1.15
CTNNA1-202ENST00000517533 RASGRF1Q13972 1273 aa7.85□□□□□ -1.15
CTNNA1-202ENST00000517533 SLBPQ14493 270 aaKnown RBP eCLIP7.85□□□□□ -1.15
CTNNA1-202ENST00000517533 DIEXFQ68CQ4 756 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-202ENST00000517533 SPATC1Q76KD6 591 aa7.85□□□□□ -1.15
CTNNA1-202ENST00000517533 MCATQ8IVS2 390 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-202ENST00000517533 SMG8Q8ND04 991 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-202ENST00000517533 GSX1Q9H4S2 264 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-202ENST00000517533 SUGCTQ9HAC7 445 aa7.85□□□□□ -1.15
CTNNA1-202ENST00000517533 IFT57Q9NWB7 429 aa7.85□□□□□ -1.15
CTNNA1-202ENST00000517533 FANCGO15287 622 aa7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 DDAH1O94760 285 aa7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 MAP4K4O95819 1239 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 HCLS1P14317 486 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 RAC1P63000 192 aa7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 SOX4Q06945 474 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 GRIK4Q16099 956 aa7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 RNF187Q5TA31 235 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 CCDC181Q5TID7 509 aa7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 INTS3Q68E01 1043 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 FILIP1Q7Z7B0 1213 aa7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 C2CD4AQ8NCU7 369 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 RNF214Q8ND24 703 aa7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 SH3TC2Q8TF17 1288 aa7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 ISL2Q96A47 359 aa7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 TMEM87BQ96K49 555 aa7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 PCDH12Q9NPG4 1184 aa7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 FAM105AQ9NUU6 356 aa7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 AP4E1Q9UPM8 1137 aa7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 ACTL7BQ9Y614 415 aa7.84□□□□□ -1.15
CTNNA1-202ENST00000517533 UBOX5O94941 541 aa7.83□□□□□ -1.16
CTNNA1-202ENST00000517533 SQSTM1Q13501 440 aa7.83□□□□□ -1.16
CTNNA1-202ENST00000517533 NUTM2GQ5VZR2 741 aa7.83□□□□□ -1.16
CTNNA1-202ENST00000517533 PPFIBP1Q86W92 1011 aa7.83□□□□□ -1.16
CTNNA1-202ENST00000517533 MRPL41Q8IXM3 137 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-202ENST00000517533 TMEM192Q8IY95 271 aa7.83□□□□□ -1.16
CTNNA1-202ENST00000517533 FAM13CQ8NE31 585 aa7.83□□□□□ -1.16
CTNNA1-202ENST00000517533 KIF2CQ99661 725 aa7.83□□□□□ -1.16
CTNNA1-202ENST00000517533 RNF208Q9H0X6 261 aa7.83□□□□□ -1.16
CTNNA1-202ENST00000517533 F8W735 103 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-202ENST00000517533 ENPP3O14638 875 aa7.82□□□□□ -1.16
CTNNA1-202ENST00000517533 HP1BP3Q5SSJ5 553 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-202ENST00000517533 IGF2-ASQ6U949 168 aa7.82□□□□□ -1.16
CTNNA1-202ENST00000517533 SLFN12Q8IYM2 578 aa7.82□□□□□ -1.16
CTNNA1-202ENST00000517533 RPUSD2Q8IZ73 545 aaKnown RBP7.82□□□□□ -1.16
CTNNA1-202ENST00000517533 ZCRB1Q8TBF4 217 aaKnown RBP7.82□□□□□ -1.16
CTNNA1-202ENST00000517533 UBE2Q2Q8WVN8 375 aa7.82□□□□□ -1.16
CTNNA1-202ENST00000517533 MYH16Q9H6N6 1097 aa7.82□□□□□ -1.16
CTNNA1-202ENST00000517533 PRDM16Q9HAZ2 1276 aa7.82□□□□□ -1.16
CTNNA1-202ENST00000517533 CHPF2Q9P2E5 772 aa7.82□□□□□ -1.16
CTNNA1-202ENST00000517533 PFDN2Q9UHV9 154 aa7.82□□□□□ -1.16
CTNNA1-202ENST00000517533 LEMD3Q9Y2U8 911 aa7.82□□□□□ -1.16
CTNNA1-202ENST00000517533 CNTNAP5Q8WYK1 1306 aa7.81□□□□□ -1.16
CTNNA1-202ENST00000517533 ESYT3A0FGR9 886 aa7.81□□□□□ -1.16
CTNNA1-202ENST00000517533 GNB5O14775 395 aa7.81□□□□□ -1.16
CTNNA1-202ENST00000517533 CLSTN1O94985 981 aa7.81□□□□□ -1.16
CTNNA1-202ENST00000517533 ELNP15502 786 aa7.81□□□□□ -1.16
CTNNA1-202ENST00000517533 VHLLQ6RSH7 139 aa7.81□□□□□ -1.16
CTNNA1-202ENST00000517533 DYMQ7RTS9 669 aa7.81□□□□□ -1.16
CTNNA1-202ENST00000517533 HID1Q8IV36 788 aa7.81□□□□□ -1.16
CTNNA1-202ENST00000517533 BAHD1Q8TBE0 780 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-202ENST00000517533 RAG1P15918 1043 aa7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 PREPP48147 710 aa7.8□□□□□ -1.16
CTNNA1-202ENST00000517533 TRIM28Q13263 835 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms