RNA–Protein interactions for RNA: ENST00000516227.1

RN7SKP288-201, Transcript of RNA, 7SK small nuclear pseudogene 288, humanhuman

BASIC

Gene RN7SKP288, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP288-201ENST00000516227 CRKP46108 304 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 TFAP4Q01664 338 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 SEC23AQ15436 765 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 CCDC178Q5BJE1 867 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 STRIP1Q5VSL9 837 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 FAM173BQ6P4H8 233 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 HHIPL2Q6UWX4 724 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 RTKN2Q8IZC4 609 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 CCDC82Q8N4S0 544 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 CERS5Q8N5B7 392 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 ENAHQ8N8S7 591 aaPredicted RBP6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 WASF1Q92558 559 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 PHKBQ93100 1093 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 FAM163AQ96GL9 167 aaPredicted RBP6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 SPATA32Q96LK8 384 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 ZNF396Q96N95 335 aaPredicted RBP6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 ALG1Q9BT22 464 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 KCNQ5Q9NR82 932 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 PIM2Q9P1W9 311 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 RBM27Q9P2N5 1060 aaKnown RBP6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 FLT1P17948 1338 aa6.94□□□□□ -1.3
RN7SKP288-201ENST00000516227 PTPRFP10586 1907 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 PHIPQ8WWQ0 1821 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 GOLGA6L3A6NEY3 463 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 NMT2O60551 498 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 FGRP09769 529 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 CDK8P49336 464 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 PLCD1P51178 756 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 RHBDL3P58872 404 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 UBE2HP62256 183 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 FKBP1AP62942 108 aaKnown RBP6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 CEBPZQ03701 1054 aaKnown RBP6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 KIAA2012Q0VF49 1180 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 RESTQ13127 1097 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 R3HDM1Q15032 1099 aaKnown RBP6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 L1TD1Q5T7N2 865 aaKnown RBP6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 SOGA3Q5TF21 947 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 OTUD7BQ6GQQ9 843 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 TTC6Q86TZ1 520 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 LARGE2Q8N3Y3 721 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 FANCBQ8NB91 859 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 CTCFLQ8NI51 663 aaPredicted RBP6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 GPT2Q8TD30 523 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 SCAND2PQ9GZW5 306 aaPredicted RBP6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 MTFR1LQ9H019 292 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 KAT14Q9H8E8 782 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 RBM28Q9NW13 759 aaKnown RBP6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 CFAP45Q9UL16 551 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 MTMR7Q9Y216 660 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 DOCK5Q9H7D0 1870 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 ROBO3Q96MS0 1386 aa6.93□□□□□ -1.3
RN7SKP288-201ENST00000516227 PSDA5PKW4 1024 aaPredicted RBP6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 DDAH1O94760 285 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 FMNL1O95466 1100 aaPredicted RBP6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 HLA-DOAP06340 250 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 IFNAR1P17181 557 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 RASA1P20936 1047 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 RCAN1P53805 252 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 TGFB2P61812 414 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 PPP2R5BQ15173 497 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 SAFBQ15424 915 aaKnown RBP eCLIP6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 NTRK3Q16288 839 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 DALRD3Q5D0E6 543 aaKnown RBP6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 DACT2Q5SW24 774 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 KRT40Q6A162 431 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 CDC42EP5Q6NZY7 148 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 C16orf86Q6ZW13 317 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 ZSCAN29Q8IWY8 852 aaPredicted RBP6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 NIM1KQ8IY84 436 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 CMTR1Q8N1G2 835 aaKnown RBP6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 CRACR2BQ8N4Y2 399 aaPredicted RBP6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 TMEM87AQ8NBN3 555 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 SLC44A5Q8NCS7 719 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 FBXO18Q8NFZ0 1043 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 C7orf43Q8WVR3 580 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 AIFM3Q96NN9 605 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 TRIM34Q9BYJ4 488 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 ZNF277Q9NRM2 450 aaPredicted RBP6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 FAM217BQ9NTX9 383 aaPredicted RBP6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 MKRN1Q9UHC7 482 aaKnown RBP6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 HDAC9Q9UKV0 1011 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 STK36Q9NRP7 1315 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 NID2Q14112 1375 aa6.92□□□□□ -1.3
RN7SKP288-201ENST00000516227 COL4A5P29400 1685 aa6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 YDJCA8MPS7 323 aa6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 RAD17O75943 681 aa6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 DEXIO95424 95 aa6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 XBP1P17861 261 aa6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 KCNA3P22001 575 aa6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 KIF5BP33176 963 aa6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 NT5C2P49902 561 aa6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 HDLBPQ00341 1268 aaKnown RBP6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 TCP10Q12799 353 aa6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 STK38Q15208 465 aa6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 SF3A1Q15459 793 aaKnown RBP6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 ZSCAN23Q3MJ62 389 aa6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 BRAPQ7Z569 592 aa6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 PNMA1Q8ND90 353 aa6.91□□□□□ -1.3
RN7SKP288-201ENST00000516227 BICD2Q8TD16 824 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms