RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 PCDHAC2Q9Y5I4 1007 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 NID2Q14112 1375 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SIPA1L1O43166 1804 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SBF1O95248 1867 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 MYH15Q9Y2K3 1946 aa8.93□□□□□ -0.98
SCARNA20.1-201ENST00000516009 GOLGB1Q14789 3259 aaKnown RBP8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CCDC196A0A1B0GTZ2 297 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SPDYE2BA6NHP3 402 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 H3BQV1 296 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SPDYE6P0CI01 402 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TSPY3P0CV98 308 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TSPY8P0CW00 308 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CALM1P0DP23 149 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CALM2P0DP24 149 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CALM3P0DP25 149 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 RASA1P20936 1047 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 RASSF7Q02833 373 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 NFIAQ12857 509 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 PPP2R5BQ15173 497 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 DLGAP5Q15398 846 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 RTN1Q16799 776 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 IFFO2Q5TF58 517 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CATIPQ7Z7H3 387 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CCDC144CPQ8IYA2 1237 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 NUP133Q8WUM0 1156 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 PRMT6Q96LA8 375 aaPredicted RBP8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 MYL10Q9BUA6 226 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 IDI2Q9BXS1 227 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 FHDC1Q9C0D6 1143 aaPredicted RBP8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 DHX36Q9H2U1 1008 aaKnown RBP8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TDRD3Q9H7E2 651 aaKnown RBP8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TCP11L1Q9NUJ3 509 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SWAP70Q9UH65 585 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SERPINB13Q9UIV8 391 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 MTMR6Q9Y217 621 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ZBTB12Q9Y330 459 aaPredicted RBP8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ATP6V1DQ9Y5K8 247 aa8.92□□□□□ -0.98
SCARNA20.1-201ENST00000516009 COL2A1P02458 1487 aaPredicted RBP8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 NMT2O60551 498 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ENTPD3O75355 529 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 DDAH1O94760 285 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 F13A1P00488 732 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 RPS12P25398 132 aaKnown RBP8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CDC27P30260 824 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ADD1P35611 737 aaKnown RBP8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 MMP14P50281 582 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CACNB3P54284 484 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 EIF6P56537 245 aaKnown RBP8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TCP10Q12799 353 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ILDR2Q71H61 639 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 DGKHQ86XP1 1220 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ZSCAN29Q8IWY8 852 aaPredicted RBP8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 FANCBQ8NB91 859 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 MTMR14Q8NCE2 650 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 NEDD1Q8NHV4 660 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 EHD4Q9H223 541 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ORC3Q9UBD5 711 aaPredicted RBP8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 FAM198AQ9UFP1 575 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TAOK2Q9UL54 1235 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 MYH4Q9Y623 1939 aa8.91□□□□□ -0.98
SCARNA20.1-201ENST00000516009 GREB1LQ9C091 1923 aaPredicted RBP8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 STK36Q9NRP7 1315 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 MYO1BO43795 1136 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 FDPSP14324 419 aaKnown RBP8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 GABPAQ06546 454 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 NTRK3Q16288 839 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 SPDYE2Q495Y8 402 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 MCTP1Q6DN14 999 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 RCSD1Q6JBY9 416 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ARHGAP27Q6ZUM4 889 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CDC37L1Q7L3B6 337 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ZFPM1Q8IX07 1006 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 CRACR2BQ8N4Y2 399 aaPredicted RBP8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ANKS1AQ92625 1134 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 TRIM34Q9BYJ4 488 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 KAT14Q9H8E8 782 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 IL17RBQ9NRM6 502 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 FAM217BQ9NTX9 383 aaPredicted RBP8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 RBM28Q9NW13 759 aaKnown RBP8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 PI4KBQ9UBF8 816 aa8.9□□□□□ -0.98
SCARNA20.1-201ENST00000516009 ATRNL1Q5VV63 1379 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 PLIN4Q96Q06 1357 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CLRN2A0PK11 232 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FZD9O00144 591 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 PPFIA3O75145 1194 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 IFNAR1P17181 557 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 LMNB1P20700 586 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 SHMT1P34896 483 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 PRELPP51888 382 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FOSBP53539 338 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 ZNF280AP59817 542 aaPredicted RBP8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 SSRP1Q08945 709 aaKnown RBP8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TROAPQ12815 778 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FKBP1CQ5VVH2 108 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FOXP4Q8IVH2 680 aaPredicted RBP8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TRIM22Q8IYM9 498 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 PNMA1Q8ND90 353 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CTCFLQ8NI51 663 aaPredicted RBP8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 PHKBQ93100 1093 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 C8orf76Q96K31 380 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms