RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 MTMR2Q13614 643 aa23.68■■□□□ 1.38
DDR1-280ENST00000515881 TATDN1Q6P1N9 297 aa23.68■■□□□ 1.38
DDR1-280ENST00000515881 SH3TC2Q8TF17 1288 aa23.68■■□□□ 1.38
DDR1-280ENST00000515881 DCTPP1Q9H773 170 aa23.68■■□□□ 1.38
DDR1-280ENST00000515881 PTPRFP10586 1907 aa23.68■■□□□ 1.38
DDR1-280ENST00000515881 MYPNQ86TC9 1320 aa23.67■■□□□ 1.38
DDR1-280ENST00000515881 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.67■■□□□ 1.381e-8■■■■■ 50
DDR1-280ENST00000515881 ATAD5Q96QE3 1844 aa23.66■■□□□ 1.38
DDR1-280ENST00000515881 LOC285556D6RIA3 1793 aa23.66■■□□□ 1.38
DDR1-280ENST00000515881 ADD2P35612 726 aa23.66■■□□□ 1.38
DDR1-280ENST00000515881 RRP1P56182 461 aaKnown RBP23.66■■□□□ 1.38
DDR1-280ENST00000515881 LCORLQ8N3X6 602 aa23.66■■□□□ 1.38
DDR1-280ENST00000515881 TMEM106CQ9BVX2 250 aa23.66■■□□□ 1.38
DDR1-280ENST00000515881 TMOD4Q9NZQ9 345 aa23.66■■□□□ 1.38
DDR1-280ENST00000515881 C19orf81C9J6K1 198 aa23.65■■□□□ 1.38
DDR1-280ENST00000515881 GH2P01242 217 aa23.65■■□□□ 1.38
DDR1-280ENST00000515881 POLR3DP05423 398 aaPredicted RBP23.65■■□□□ 1.38
DDR1-280ENST00000515881 PLCD1P51178 756 aa23.65■■□□□ 1.38
DDR1-280ENST00000515881 PRKCZQ05513 592 aa23.65■■□□□ 1.38
DDR1-280ENST00000515881 ANKRD13CQ8N6S4 541 aa23.65■■□□□ 1.38
DDR1-280ENST00000515881 RAET1EQ8TD07 263 aa23.65■■□□□ 1.38
DDR1-280ENST00000515881 ASCC2Q9H1I8 757 aaPredicted RBP23.65■■□□□ 1.38
DDR1-280ENST00000515881 USP17L10C9JJH3 530 aa23.64■■□□□ 1.37
DDR1-280ENST00000515881 GCLCP48506 637 aaPredicted RBP23.64■■□□□ 1.37
DDR1-280ENST00000515881 FAM110CQ1W6H9 321 aa23.64■■□□□ 1.37
DDR1-280ENST00000515881 SLFNL1Q499Z3 407 aa23.64■■□□□ 1.37
DDR1-280ENST00000515881 SDR42E1Q8WUS8 393 aa23.64■■□□□ 1.37
DDR1-280ENST00000515881 ARMT1Q9H993 441 aa23.64■■□□□ 1.37
DDR1-280ENST00000515881 ECHDC1Q9NTX5 307 aa23.64■■□□□ 1.37
DDR1-280ENST00000515881 MCM9Q9NXL9 1143 aa23.64■■□□□ 1.37
DDR1-280ENST00000515881 MYCP01106 439 aaPredicted RBP23.63■■□□□ 1.37
DDR1-280ENST00000515881 CERKLQ49MI3 558 aaPredicted RBP23.63■■□□□ 1.37
DDR1-280ENST00000515881 DDX60LQ5H9U9 1706 aaKnown RBP23.63■■□□□ 1.37
DDR1-280ENST00000515881 DCP1AQ9NPI6 582 aaPredicted RBP23.63■■□□□ 1.37
DDR1-280ENST00000515881 PCDHB15Q9Y5E8 787 aa23.63■■□□□ 1.37
DDR1-280ENST00000515881 TNPO2O14787 897 aaKnown RBP23.62■■□□□ 1.37
DDR1-280ENST00000515881 MBD4O95243 580 aa23.62■■□□□ 1.37
DDR1-280ENST00000515881 EN2P19622 333 aaPredicted RBP23.62■■□□□ 1.37
DDR1-280ENST00000515881 GRK4P32298 578 aa23.62■■□□□ 1.37
DDR1-280ENST00000515881 SHMT1P34896 483 aa23.62■■□□□ 1.37
DDR1-280ENST00000515881 UBE3CQ15386 1083 aa23.62■■□□□ 1.37
DDR1-280ENST00000515881 GABRQQ9UN88 632 aa23.62■■□□□ 1.37
DDR1-280ENST00000515881 HOXA7P31268 230 aaPredicted RBP23.61■■□□□ 1.37
DDR1-280ENST00000515881 IRX3P78415 501 aaPredicted RBP23.61■■□□□ 1.37
DDR1-280ENST00000515881 GABPAQ06546 454 aa23.61■■□□□ 1.37
DDR1-280ENST00000515881 ABCB5Q2M3G0 1257 aa23.61■■□□□ 1.37
DDR1-280ENST00000515881 GPATCH3Q96I76 525 aa23.61■■□□□ 1.37
DDR1-280ENST00000515881 MYH1P12882 1939 aa23.61■■□□□ 1.37
DDR1-280ENST00000515881 CHGBP05060 677 aa23.6■■□□□ 1.37
DDR1-280ENST00000515881 EVX2Q03828 476 aa23.6■■□□□ 1.37
DDR1-280ENST00000515881 RAB3GAP1Q15042 981 aa23.6■■□□□ 1.37
DDR1-280ENST00000515881 ZSCAN25Q6NSZ9 544 aa23.6■■□□□ 1.37
DDR1-280ENST00000515881 YTHDC1Q96MU7 727 aaKnown RBP23.6■■□□□ 1.37
DDR1-280ENST00000515881 EMILIN3Q9NT22 766 aa23.6■■□□□ 1.37
DDR1-280ENST00000515881 RBBP6Q7Z6E9 1792 aaKnown RBP23.6■■□□□ 1.37
DDR1-280ENST00000515881 PRKAB2O43741 272 aa23.59■■□□□ 1.37
DDR1-280ENST00000515881 FLT3LGP49771 235 aa23.59■■□□□ 1.37
DDR1-280ENST00000515881 USP17L2Q6R6M4 530 aa23.59■■□□□ 1.37
DDR1-280ENST00000515881 CABP5Q9NP86 173 aa23.59■■□□□ 1.37
DDR1-280ENST00000515881 ATP8A2Q9NTI2 1148 aa23.59■■□□□ 1.37
DDR1-280ENST00000515881 CYP2D6P10635 497 aa23.58■■□□□ 1.37
DDR1-280ENST00000515881 SLAIN1Q8ND83 568 aa23.58■■□□□ 1.37
DDR1-280ENST00000515881 COA7Q96BR5 231 aa23.58■■□□□ 1.37
DDR1-280ENST00000515881 P2RX7Q99572 595 aaKnown RBP23.58■■□□□ 1.37
DDR1-280ENST00000515881 FEZ1Q99689 392 aa23.58■■□□□ 1.37
DDR1-280ENST00000515881 MORF4L1Q9UBU8 362 aa23.58■■□□□ 1.37
DDR1-280ENST00000515881 TNRC18O15417 2968 aaPredicted RBP23.58■■□□□ 1.36
DDR1-280ENST00000515881 NAV1Q8NEY1 1877 aa23.58■■□□□ 1.36
DDR1-280ENST00000515881 MTFR1Q15390 333 aa23.57■■□□□ 1.36
DDR1-280ENST00000515881 TSHZ3Q63HK5 1081 aa23.57■■□□□ 1.36
DDR1-280ENST00000515881 C12orf42Q96LP6 360 aa23.57■■□□□ 1.36
DDR1-280ENST00000515881 KIAA1683Q9H0B3 1180 aa23.57■■□□□ 1.36
DDR1-280ENST00000515881 TAOK2Q9UL54 1235 aa23.57■■□□□ 1.36
DDR1-280ENST00000515881 ADCY3O60266 1144 aa23.56■■□□□ 1.36
DDR1-280ENST00000515881 GUCY1A2P33402 732 aa23.56■■□□□ 1.36
DDR1-280ENST00000515881 HERVK_113P62684 666 aa23.56■■□□□ 1.36
DDR1-280ENST00000515881 IRF5Q13568 498 aa23.56■■□□□ 1.36
DDR1-280ENST00000515881 ZYXQ15942 572 aaKnown RBP23.56■■□□□ 1.36
DDR1-280ENST00000515881 KBTBD3Q8NAB2 608 aa23.56■■□□□ 1.36
DDR1-280ENST00000515881 CRBNQ96SW2 442 aa23.56■■□□□ 1.36
DDR1-280ENST00000515881 PUS7LQ9H0K6 701 aaKnown RBP23.56■■□□□ 1.36
DDR1-280ENST00000515881 BIN2Q9UBW5 565 aaPredicted RBP23.56■■□□□ 1.36
DDR1-280ENST00000515881 SWAP70Q9UH65 585 aa23.56■■□□□ 1.36
DDR1-280ENST00000515881 USP14P54578 494 aa23.55■■□□□ 1.36
DDR1-280ENST00000515881 UBXN2AP68543 259 aa23.55■■□□□ 1.36
DDR1-280ENST00000515881 PRPF38BQ5VTL8 546 aaKnown RBP23.55■■□□□ 1.36
DDR1-280ENST00000515881 SLC44A5Q8NCS7 719 aa23.55■■□□□ 1.36
DDR1-280ENST00000515881 ACER1Q8TDN7 264 aa23.55■■□□□ 1.36
DDR1-280ENST00000515881 CCL5P13501 91 aa23.54■■□□□ 1.36
DDR1-280ENST00000515881 SEPT2Q15019 361 aa23.54■■□□□ 1.36
DDR1-280ENST00000515881 PXYLP1Q8TE99 480 aa23.54■■□□□ 1.36
DDR1-280ENST00000515881 DYNLL2Q96FJ2 89 aa23.54■■□□□ 1.36
DDR1-280ENST00000515881 DDRGK1Q96HY6 314 aa23.54■■□□□ 1.36
DDR1-280ENST00000515881 TXNRD2Q9NNW7 524 aa23.54■■□□□ 1.36
DDR1-280ENST00000515881 SLC4A4Q9Y6R1 1079 aa23.54■■□□□ 1.36
DDR1-280ENST00000515881 MPHOSPH10O00566 681 aaKnown RBP23.53■■□□□ 1.36
DDR1-280ENST00000515881 ELNP15502 786 aa23.53■■□□□ 1.36
DDR1-280ENST00000515881 C12orf60Q5U649 245 aa23.53■■□□□ 1.36
DDR1-280ENST00000515881 AMOTL1Q8IY63 956 aa23.53■■□□□ 1.36
DDR1-280ENST00000515881 GPRC5AQ8NFJ5 357 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms