RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	DPP8	Q6V1X1	898 aa	Predicted RBP	5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CDC37L1	Q7L3B6	337 aa		5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	DEFB132	Q7Z7B7	95 aa		5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	KRTAP1-3	Q8IUG1	177 aa		5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TMTC2	Q8N394	836 aa		5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	FAM184A	Q8NB25	1140 aa		5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SLC16A10	Q8TF71	515 aa		5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	C7orf43	Q8WVR3	580 aa		5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ESR2	Q92731	530 aa		5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CNKSR1	Q969H4	720 aa		5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ZNF622	Q969S3	477 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	EYA3	Q99504	573 aa		5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	RTFDC1	Q9BY42	306 aa	Predicted RBP	5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ZC3H12C	Q9C0D7	883 aa	Known RBP	5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TMX4	Q9H1E5	349 aa	Predicted RBP	5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SENP2	Q9HC62	589 aa		5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	NCOA5	Q9HCD5	579 aa	Known RBP	5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ARPP21	Q9UBL0	812 aa	Predicted RBP	5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SUGT1	Q9Y2Z0	365 aa		5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	KIF3A	Q9Y496	699 aa		5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	DDX49	Q9Y6V7	483 aa	Known RBP	5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	NID2	Q14112	1375 aa		5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	COL11A2	P13942	1736 aa	Predicted RBP	5.26	□□□□□ -1.57
ATP2C1-223	ENST00000515854	GAK	O14976	1311 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	C10orf71	Q711Q0	1435 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SNED1	Q8TER0	1413 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CYP2D7	A0A087X1C5	515 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	KRTAP9-6	A0A140TA67	174 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SMIM22	K7EJ46	135 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ZBTB43	O43298	467 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ZMYND10	O75800	440 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	MBD3	O95983	291 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CHRNA5	P30532	468 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	BTD	P43251	543 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	METAP2	P50579	478 aa	Known RBP eCLIP	5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	RCAN1	P53805	252 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	FKBP1A	P62942	108 aa	Known RBP	5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	GTF2I	P78347	998 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	REST	Q13127	1097 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SART3	Q15020	963 aa	Known RBP	5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SEC23A	Q15436	765 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	DIXDC1	Q155Q3	683 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	NTRK3	Q16288	839 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	RRP12	Q5JTH9	1297 aa	Known RBP	5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	MFSD14B	Q5SR56	506 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	C12orf60	Q5U649	245 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CC2D2B	Q6DHV5	1058 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	APOA5	Q6Q788	366 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	PODN	Q7Z5L7	613 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	USP48	Q86UV5	1035 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CCDC125	Q86Z20	511 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SLF2	Q8IX21	1173 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	GPT2	Q8TD30	523 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	DDX11	Q96FC9	970 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	NOL10	Q9BSC4	688 aa	Known RBP	5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	KRTAP9-2	Q9BYQ4	174 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	FAM217B	Q9NTX9	383 aa	Predicted RBP	5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	NAP1L2	Q9ULW6	460 aa	Predicted RBP	5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CNPY2	Q9Y2B0	182 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ROBO3	Q96MS0	1386 aa		5.25	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ERICH2	A1L162	156 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	FSD2	A1L4K1	749 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CCDC69	A6NI79	296 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	GOLGA8A	A7E2F4	631 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854		H3BQV1	296 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CPLX1	O14810	134 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	GADD45B	O75293	160 aa	Predicted RBP	5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	WFS1	O76024	890 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CDKL5	O76039	1030 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SLC3A2	P08195	630 aa	Known RBP	5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	USP17L8	P0C7I0	530 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CYP2D6	P10635	497 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	IFNAR1	P17181	557 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CDC27	P30260	824 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ADD1	P35611	737 aa	Known RBP	5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	USP5	P45974	858 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	PSEN2	P49810	448 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	RHBDL3	P58872	404 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	KRT85	P78386	507 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	DNM1	Q05193	864 aa	Known RBP	5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	WTAP	Q15007	396 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	PPP2R5B	Q15173	497 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CSPP1	Q1MSJ5	1256 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	GRIPAP1	Q4V328	841 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CPLX2	Q6PUV4	134 aa	Known RBP	5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	FOXD4L3	Q6VB84	417 aa	Predicted RBP	5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SYNE3	Q6ZMZ3	975 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	NFXL1	Q6ZNB6	911 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	FERMT3	Q86UX7	667 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CERS5	Q8N5B7	392 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ZKSCAN3	Q9BRR0	538 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	MRI	Q9BWK5	157 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	GZF1	Q9H116	711 aa	Predicted RBP	5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TOMM22	Q9NS69	142 aa		5.24	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms