RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 MYH7P12883 1935 aa23.27■■□□□ 1.32
LMNA-225ENST00000515824 GNAT2P19087 354 aa23.27■■□□□ 1.32
LMNA-225ENST00000515824 GABPAQ06546 454 aa23.27■■□□□ 1.32
LMNA-225ENST00000515824 WDR18Q9BV38 432 aa23.27■■□□□ 1.32
LMNA-225ENST00000515824 ZBTB21Q9ULJ3 1066 aa23.27■■□□□ 1.32
LMNA-225ENST00000515824 SIPA1L1O43166 1804 aa23.26■■□□□ 1.31
LMNA-225ENST00000515824 USP17L12C9JPN9 530 aa23.26■■□□□ 1.31
LMNA-225ENST00000515824 USP17L21D6R901 530 aa23.26■■□□□ 1.31
LMNA-225ENST00000515824 GPAA1O43292 621 aa23.26■■□□□ 1.31
LMNA-225ENST00000515824 TLR2O60603 784 aa23.26■■□□□ 1.31
LMNA-225ENST00000515824 JAG1P78504 1218 aa23.26■■□□□ 1.31
LMNA-225ENST00000515824 SP3Q02447 781 aa23.26■■□□□ 1.31
LMNA-225ENST00000515824 GPAT2Q6NUI2 795 aa23.26■■□□□ 1.31
LMNA-225ENST00000515824 PLEKHM2Q8IWE5 1019 aa23.26■■□□□ 1.31
LMNA-225ENST00000515824 MCOLN1Q9GZU1 580 aa23.26■■□□□ 1.31
LMNA-225ENST00000515824 CABP5Q9NP86 173 aa23.26■■□□□ 1.31
LMNA-225ENST00000515824 SWAP70Q9UH65 585 aa23.26■■□□□ 1.31
LMNA-225ENST00000515824 TRIM6-TRIM34B2RNG4 842 aa23.25■■□□□ 1.31
LMNA-225ENST00000515824 M0R2C6 588 aa23.25■■□□□ 1.31
LMNA-225ENST00000515824 GH2P01242 217 aa23.25■■□□□ 1.31
LMNA-225ENST00000515824 CYP2D6P10635 497 aa23.25■■□□□ 1.31
LMNA-225ENST00000515824 SHMT1P34896 483 aa23.25■■□□□ 1.31
LMNA-225ENST00000515824 ABCB5Q2M3G0 1257 aa23.25■■□□□ 1.31
LMNA-225ENST00000515824 ZMYM1Q5SVZ6 1142 aa23.25■■□□□ 1.31
LMNA-225ENST00000515824 C12orf60Q5U649 245 aa23.25■■□□□ 1.31
LMNA-225ENST00000515824 GIMAP6Q6P9H5 292 aa23.25■■□□□ 1.31
LMNA-225ENST00000515824 OSBPL3Q9H4L5 887 aa23.25■■□□□ 1.31
LMNA-225ENST00000515824 TICAM2Q86XR7 235 aa23.24■■□□□ 1.31
LMNA-225ENST00000515824 PROCA1Q8NCQ7 364 aaPredicted RBP23.24■■□□□ 1.31
LMNA-225ENST00000515824 ERO1AQ96HE7 468 aa23.24■■□□□ 1.31
LMNA-225ENST00000515824 PARK7Q99497 189 aaKnown RBP23.24■■□□□ 1.31
LMNA-225ENST00000515824 SLC45A1Q9Y2W3 748 aa23.24■■□□□ 1.31
LMNA-225ENST00000515824 GSG1L2A8MUP6 293 aa23.23■■□□□ 1.31
LMNA-225ENST00000515824 USP17L10C9JJH3 530 aa23.23■■□□□ 1.31
LMNA-225ENST00000515824 APPP05067 770 aa23.23■■□□□ 1.31
LMNA-225ENST00000515824 BACE1P56817 501 aa23.23■■□□□ 1.31
LMNA-225ENST00000515824 PKN2Q16513 984 aaKnown RBP23.23■■□□□ 1.31
LMNA-225ENST00000515824 SHROOM1Q2M3G4 852 aaPredicted RBP23.23■■□□□ 1.31
LMNA-225ENST00000515824 CTR9Q6PD62 1173 aa23.23■■□□□ 1.31
LMNA-225ENST00000515824 SEC62Q99442 399 aaKnown RBP23.23■■□□□ 1.31
LMNA-225ENST00000515824 ARPP21Q9UBL0 812 aaPredicted RBP23.23■■□□□ 1.31
LMNA-225ENST00000515824 AGTPBP1Q9UPW5 1226 aa23.23■■□□□ 1.31
LMNA-225ENST00000515824 NAV1Q8NEY1 1877 aa23.23■■□□□ 1.31
LMNA-225ENST00000515824 C19orf81C9J6K1 198 aa23.22■■□□□ 1.31
LMNA-225ENST00000515824 PATL2C9JE40 543 aaKnown RBP23.22■■□□□ 1.31
LMNA-225ENST00000515824 HMGCS2P54868 508 aa23.22■■□□□ 1.31
LMNA-225ENST00000515824 EVX2Q03828 476 aa23.22■■□□□ 1.31
LMNA-225ENST00000515824 RAB3GAP1Q15042 981 aa23.22■■□□□ 1.31
LMNA-225ENST00000515824 SH3D19Q5HYK7 790 aa23.22■■□□□ 1.31
LMNA-225ENST00000515824 RILPL2Q969X0 211 aa23.22■■□□□ 1.31
LMNA-225ENST00000515824 DYNLL2Q96FJ2 89 aa23.22■■□□□ 1.31
LMNA-225ENST00000515824 TMOD4Q9NZQ9 345 aa23.22■■□□□ 1.31
LMNA-225ENST00000515824 CYP2D7A0A087X1C5 515 aa23.21■■□□□ 1.31
LMNA-225ENST00000515824 PABPC4Q13310 644 aaKnown RBP eCLIP23.21■■□□□ 1.31
LMNA-225ENST00000515824 MTMR2Q13614 643 aa23.21■■□□□ 1.31
LMNA-225ENST00000515824 ARHGEF6Q15052 776 aa23.21■■□□□ 1.31
LMNA-225ENST00000515824 SBK1Q52WX2 424 aa23.21■■□□□ 1.31
LMNA-225ENST00000515824 ABHD8Q96I13 439 aa23.21■■□□□ 1.31
LMNA-225ENST00000515824 NACAP1Q9BZK3 213 aa23.21■■□□□ 1.31
LMNA-225ENST00000515824 DDX60LQ5H9U9 1706 aaKnown RBP23.2■■□□□ 1.3
LMNA-225ENST00000515824 MPHOSPH10O00566 681 aaKnown RBP23.2■■□□□ 1.3
LMNA-225ENST00000515824 CYP2C8P10632 490 aa23.2■■□□□ 1.3
LMNA-225ENST00000515824 TDO2P48775 406 aa23.2■■□□□ 1.3
LMNA-225ENST00000515824 CDK8P49336 464 aa23.2■■□□□ 1.3
LMNA-225ENST00000515824 C17orf99Q6UX52 265 aa23.2■■□□□ 1.3
LMNA-225ENST00000515824 SLC44A5Q8NCS7 719 aa23.2■■□□□ 1.3
LMNA-225ENST00000515824 CD99L2Q8TCZ2 262 aa23.2■■□□□ 1.3
LMNA-225ENST00000515824 HELLSQ9NRZ9 838 aa23.2■■□□□ 1.3
LMNA-225ENST00000515824 PHIPQ8WWQ0 1821 aa23.19■■□□□ 1.3
LMNA-225ENST00000515824 ATAD5Q96QE3 1844 aa23.19■■□□□ 1.3
LMNA-225ENST00000515824 MINDY4BA8MYZ0 360 aa23.19■■□□□ 1.3
LMNA-225ENST00000515824 KIF22Q14807 665 aa23.19■■□□□ 1.3
LMNA-225ENST00000515824 TREML2Q5T2D2 321 aa23.19■■□□□ 1.3
LMNA-225ENST00000515824 C16orf86Q6ZW13 317 aa23.19■■□□□ 1.3
LMNA-225ENST00000515824 IFNL3Q8IZI9 196 aa23.19■■□□□ 1.3
LMNA-225ENST00000515824 CCDC17Q96LX7 622 aa23.19■■□□□ 1.3
LMNA-225ENST00000515824 CPA4Q9UI42 421 aa23.19■■□□□ 1.3
LMNA-225ENST00000515824 PNMA3Q9UL41 463 aa23.19■■□□□ 1.3
LMNA-225ENST00000515824 TRIM17Q9Y577 477 aa23.19■■□□□ 1.3
LMNA-225ENST00000515824 OSBPP22059 807 aa23.18■■□□□ 1.3
LMNA-225ENST00000515824 USP17L2Q6R6M4 530 aa23.18■■□□□ 1.3
LMNA-225ENST00000515824 SMCR8Q8TEV9 937 aaPredicted RBP23.18■■□□□ 1.3
LMNA-225ENST00000515824 EFCC1Q9HA90 598 aa23.18■■□□□ 1.3
LMNA-225ENST00000515824 TMEM179Q6ZVK1 233 aa23.17■■□□□ 1.3
LMNA-225ENST00000515824 FEZ1Q99689 392 aa23.17■■□□□ 1.3
LMNA-225ENST00000515824 EPB41L4AQ9HCS5 686 aaPredicted RBP23.17■■□□□ 1.3
LMNA-225ENST00000515824 ADGRA2Q96PE1 1338 aa23.16■■□□□ 1.3
LMNA-225ENST00000515824 SMIM22K7EJ46 135 aa23.16■■□□□ 1.3
LMNA-225ENST00000515824 CAPN15O75808 1086 aa23.16■■□□□ 1.3
LMNA-225ENST00000515824 GUCY1A2P33402 732 aa23.16■■□□□ 1.3
LMNA-225ENST00000515824 USP14P54578 494 aa23.16■■□□□ 1.3
LMNA-225ENST00000515824 SEPT2Q15019 361 aa23.16■■□□□ 1.3
LMNA-225ENST00000515824 MCMDC2Q4G0Z9 681 aa23.16■■□□□ 1.3
LMNA-225ENST00000515824 OTOP1Q7RTM1 612 aa23.16■■□□□ 1.3
LMNA-225ENST00000515824 NAPBQ9H115 298 aa23.16■■□□□ 1.3
LMNA-225ENST00000515824 BAZ2AQ9UIF9 1905 aaKnown RBP23.16■■□□□ 1.3
LMNA-225ENST00000515824 PDE4AP27815 886 aa23.15■■□□□ 1.3
LMNA-225ENST00000515824 LACTBP83111 547 aaPredicted RBP23.15■■□□□ 1.3
LMNA-225ENST00000515824 FBXO46Q6PJ61 603 aaPredicted RBP23.15■■□□□ 1.3
LMNA-225ENST00000515824 CCDC129Q6ZRS4 1044 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms