RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 PASKQ96RG2 1323 aa14.17□□□□□ -0.14
PDLIM5-220ENST00000514830 CTCFP49711 727 aaPredicted RBP14.17□□□□□ -0.14
PDLIM5-220ENST00000514830 FKBP1BP68106 108 aa14.17□□□□□ -0.14
PDLIM5-220ENST00000514830 TRDNQ13061 729 aa14.17□□□□□ -0.14
PDLIM5-220ENST00000514830 NCOA7Q8NI08 942 aa14.17□□□□□ -0.14
PDLIM5-220ENST00000514830 KIF2CQ99661 725 aa14.17□□□□□ -0.14
PDLIM5-220ENST00000514830 PRDM10Q9NQV6 1147 aa14.17□□□□□ -0.14
PDLIM5-220ENST00000514830 NEDD4P46934 1319 aa14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 PCNTO95613 3336 aa14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 PPP1R12BO60237 982 aaPredicted RBP14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 CTNND1O60716 968 aaKnown RBP14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 PSMA5P28066 241 aa14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 NOL9Q5SY16 702 aaKnown RBP14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 MB21D2Q8IYB1 491 aaPredicted RBP14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 FBXL16Q8N461 479 aa14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 SLC44A5Q8NCS7 719 aa14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 ESR2Q92731 530 aa14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 NEK1Q96PY6 1258 aa14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 TRIM34Q9BYJ4 488 aa14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 MKNK2Q9HBH9 465 aa14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 ZSWIM6Q9HCJ5 1215 aa14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 TCP11L1Q9NUJ3 509 aa14.16□□□□□ -0.14
PDLIM5-220ENST00000514830 MYH4Q9Y623 1939 aa14.15□□□□□ -0.14
PDLIM5-220ENST00000514830 USP2O75604 605 aaPredicted RBP14.15□□□□□ -0.14
PDLIM5-220ENST00000514830 CAP2P40123 477 aa14.15□□□□□ -0.14
PDLIM5-220ENST00000514830 NOVP48745 357 aa14.15□□□□□ -0.14
PDLIM5-220ENST00000514830 SLC4A8Q2Y0W8 1093 aa14.15□□□□□ -0.14
PDLIM5-220ENST00000514830 ADCK5Q3MIX3 580 aa14.15□□□□□ -0.14
PDLIM5-220ENST00000514830 CERKLQ49MI3 558 aaPredicted RBP14.15□□□□□ -0.14
PDLIM5-220ENST00000514830 PRAMEF18Q5VWM3 479 aa14.15□□□□□ -0.14
PDLIM5-220ENST00000514830 RALYLQ86SE5 291 aaKnown RBP14.15□□□□□ -0.14
PDLIM5-220ENST00000514830 ZNF444Q8N0Y2 327 aaPredicted RBP14.15□□□□□ -0.14
PDLIM5-220ENST00000514830 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.15□□□□□ -0.141e-6■■■□□ 17.2
PDLIM5-220ENST00000514830 NEDD1Q8NHV4 660 aa14.15□□□□□ -0.14
PDLIM5-220ENST00000514830 ALDH8A1Q9H2A2 487 aaPredicted RBP14.15□□□□□ -0.14
PDLIM5-220ENST00000514830 IGKV6D-41A0A0C4DH26 115 aa14.14□□□□□ -0.15
PDLIM5-220ENST00000514830 TMEM88BA6NKF7 163 aa14.14□□□□□ -0.15
PDLIM5-220ENST00000514830 FAM196BA6NMK8 535 aa14.14□□□□□ -0.15
PDLIM5-220ENST00000514830 MCM5P33992 734 aa14.14□□□□□ -0.15
PDLIM5-220ENST00000514830 EXOSC10Q01780 885 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-220ENST00000514830 CCDC178Q5BJE1 867 aa14.14□□□□□ -0.15
PDLIM5-220ENST00000514830 PPP4R3BQ5MIZ7 849 aa14.14□□□□□ -0.15
PDLIM5-220ENST00000514830 MIGA2Q7L4E1 593 aa14.14□□□□□ -0.15
PDLIM5-220ENST00000514830 DHX32Q7L7V1 743 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-220ENST00000514830 INCENPQ9NQS7 918 aa14.14□□□□□ -0.15
PDLIM5-220ENST00000514830 B4E1Z4 1266 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 TRAF5O00463 557 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 KDM4AO75164 1064 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 PRDM1O75626 825 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 ASNSP08243 561 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 IREB2P48200 963 aaKnown RBP14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 RRP1BQ14684 758 aaKnown RBP14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 ABCB5Q2M3G0 1257 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 LDLRAD1Q5T700 205 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 BLOC1S2Q6QNY1 142 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 DLK2Q6UY11 383 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 TMEM179Q6ZVK1 233 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 RUFY3Q7L099 469 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 ARMC9Q7Z3E5 817 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 ANKS1AQ92625 1134 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 JAKMIP1Q96N16 626 aaKnown RBP14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 AGXT2Q9BYV1 514 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 TBC1D2Q9BYX2 928 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 ZSWIM5Q9P217 1185 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 SYNPO2Q9UMS6 1093 aa14.13□□□□□ -0.15
PDLIM5-220ENST00000514830 PTPRFP10586 1907 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 TSPY2A6NKD2 308 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 RANBP6O60518 1105 aaKnown RBP14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 TSPY3P0CV98 308 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 TSPY8P0CW00 308 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 SLURP2P0DP57 97 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 AKR1B1P15121 316 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 CASTP20810 708 aaKnown RBP14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 RPS6KB1P23443 525 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 ANTXR2P58335 489 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 MAP3K9P80192 1104 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 TFAP4Q01664 338 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 RABEP1Q15276 862 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 CYB5R4Q7L1T6 521 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 IQCA1Q86XH1 822 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 SCYL3Q8IZE3 742 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 TMEM87BQ96K49 555 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 TTC14Q96N46 770 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 WRNIP1Q96S55 665 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 CYP46A1Q9Y6A2 500 aa14.12□□□□□ -0.15
PDLIM5-220ENST00000514830 GUCY1A2P33402 732 aa14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 LIFRP42702 1097 aa14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 MAP2K1Q02750 393 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 SART3Q15020 963 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 RRP12Q5JTH9 1297 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 CST9Q5W186 159 aa14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 DGKHQ86XP1 1220 aa14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 ANKRD13AQ8IZ07 590 aa14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 NKX2-3Q8TAU0 364 aa14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 BEGAINQ9BUH8 593 aa14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 KANSL2Q9H9L4 492 aa14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 GBA2Q9HCG7 927 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-220ENST00000514830 CABP5Q9NP86 173 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms