RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 USP17L24Q0WX57 530 aa7.55□□□□□ -1.2
GYPB-215ENST00000513677 NFX1Q12986 1120 aaKnown RBP7.55□□□□□ -1.2
GYPB-215ENST00000513677 PTK7Q13308 1070 aa7.55□□□□□ -1.2
GYPB-215ENST00000513677 HSP90AB3PQ58FF7 597 aa7.55□□□□□ -1.2
GYPB-215ENST00000513677 GNASQ5JWF2 1037 aa7.55□□□□□ -1.2
GYPB-215ENST00000513677 SLC10A5Q5PT55 438 aa7.55□□□□□ -1.2
GYPB-215ENST00000513677 HHIPL1Q96JK4 782 aa7.55□□□□□ -1.2
GYPB-215ENST00000513677 KCNQ5Q9NR82 932 aa7.55□□□□□ -1.2
GYPB-215ENST00000513677 GGA3Q9NZ52 723 aa7.55□□□□□ -1.2
GYPB-215ENST00000513677 PGAP2Q9UHJ9 254 aa7.55□□□□□ -1.2
GYPB-215ENST00000513677 RBM19Q9Y4C8 960 aaKnown RBP7.55□□□□□ -1.2
GYPB-215ENST00000513677 DUOX1Q9NRD9 1551 aa7.54□□□□□ -1.2
GYPB-215ENST00000513677 ASTN2O75129 1339 aaPredicted RBP7.54□□□□□ -1.2
GYPB-215ENST00000513677 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.54□□□□□ -1.2
GYPB-215ENST00000513677 A6NJY4 79 aa7.54□□□□□ -1.2
GYPB-215ENST00000513677 SFI1A8K8P3 1242 aa7.54□□□□□ -1.2
GYPB-215ENST00000513677 DKK1O94907 266 aa7.54□□□□□ -1.2
GYPB-215ENST00000513677 RIPK4P57078 832 aa7.54□□□□□ -1.2
GYPB-215ENST00000513677 MTFR1Q15390 333 aa7.54□□□□□ -1.2
GYPB-215ENST00000513677 KRT24Q2M2I5 525 aa7.54□□□□□ -1.2
GYPB-215ENST00000513677 KIF4BQ2VIQ3 1234 aa7.54□□□□□ -1.2
GYPB-215ENST00000513677 NPAS3Q8IXF0 933 aa7.54□□□□□ -1.2
GYPB-215ENST00000513677 CELF1Q92879 486 aaKnown RBP7.54□□□□□ -1.2
GYPB-215ENST00000513677 FAM89AQ96GI7 184 aa7.54□□□□□ -1.2
GYPB-215ENST00000513677 PLEKHF1Q96S99 279 aa7.54□□□□□ -1.2
GYPB-215ENST00000513677 RNF186Q9NXI6 227 aa7.54□□□□□ -1.2
GYPB-215ENST00000513677 SCAF8Q9UPN6 1271 aaKnown RBP7.54□□□□□ -1.2
GYPB-215ENST00000513677 USP3Q9Y6I4 520 aa7.54□□□□□ -1.2
GYPB-215ENST00000513677 DDX60Q8IY21 1712 aaKnown RBP7.54□□□□□ -1.2
GYPB-215ENST00000513677 FAM155AB1AL88 458 aaPredicted RBP7.53□□□□□ -1.2
GYPB-215ENST00000513677 H3BM21 787 aa7.53□□□□□ -1.2
GYPB-215ENST00000513677 WFS1O76024 890 aa7.53□□□□□ -1.2
GYPB-215ENST00000513677 DPYDQ12882 1025 aa7.53□□□□□ -1.2
GYPB-215ENST00000513677 TCIRG1Q13488 830 aa7.53□□□□□ -1.2
GYPB-215ENST00000513677 C4orf17Q53FE4 359 aa7.53□□□□□ -1.2
GYPB-215ENST00000513677 LRP10Q7Z4F1 713 aa7.53□□□□□ -1.2
GYPB-215ENST00000513677 RHBDD1Q8TEB9 315 aa7.53□□□□□ -1.2
GYPB-215ENST00000513677 CDCA5Q96FF9 252 aa7.53□□□□□ -1.2
GYPB-215ENST00000513677 EYA3Q99504 573 aa7.53□□□□□ -1.2
GYPB-215ENST00000513677 PNNQ9H307 717 aaKnown RBP7.53□□□□□ -1.2
GYPB-215ENST00000513677 TIMMDC1Q9NPL8 285 aa7.53□□□□□ -1.2
GYPB-215ENST00000513677 CHPF2Q9P2E5 772 aa7.53□□□□□ -1.2
GYPB-215ENST00000513677 POLLQ9UGP5 575 aa7.53□□□□□ -1.2
GYPB-215ENST00000513677 HDAC9Q9UKV0 1011 aa7.53□□□□□ -1.2
GYPB-215ENST00000513677 COL4A1P02462 1669 aa7.53□□□□□ -1.2
GYPB-215ENST00000513677 LRRC37AA6NMS7 1700 aa7.52□□□□□ -1.2
GYPB-215ENST00000513677 RTL9Q8NET4 1388 aa7.52□□□□□ -1.21
GYPB-215ENST00000513677 UFL1O94874 794 aa7.52□□□□□ -1.21
GYPB-215ENST00000513677 TBC1D8O95759 1140 aa7.52□□□□□ -1.21
GYPB-215ENST00000513677 PLA2G4AP47712 749 aa7.52□□□□□ -1.21
GYPB-215ENST00000513677 SEC13P55735 322 aa7.52□□□□□ -1.21
GYPB-215ENST00000513677 ANGEL2Q5VTE6 544 aaKnown RBP7.52□□□□□ -1.21
GYPB-215ENST00000513677 MOB2Q70IA6 237 aa7.52□□□□□ -1.21
GYPB-215ENST00000513677 CTU1Q7Z7A3 348 aaKnown RBP7.52□□□□□ -1.21
GYPB-215ENST00000513677 ANKMY2Q8IV38 441 aa7.52□□□□□ -1.21
GYPB-215ENST00000513677 CCDC146Q8IYE0 955 aa7.52□□□□□ -1.21
GYPB-215ENST00000513677 TSEN2Q8NCE0 465 aaKnown RBP7.52□□□□□ -1.21
GYPB-215ENST00000513677 DPF2Q92785 391 aa7.52□□□□□ -1.21
GYPB-215ENST00000513677 CSRNP1Q96S65 589 aa7.52□□□□□ -1.21
GYPB-215ENST00000513677 GAS2L1Q99501 681 aaPredicted RBP7.52□□□□□ -1.21
GYPB-215ENST00000513677 ZC3H12CQ9C0D7 883 aaKnown RBP7.52□□□□□ -1.21
GYPB-215ENST00000513677 SAGE1Q9NXZ1 904 aa7.52□□□□□ -1.21
GYPB-215ENST00000513677 ANKIB1Q9P2G1 1089 aa7.52□□□□□ -1.21
GYPB-215ENST00000513677 IQSEC3Q9UPP2 1182 aaPredicted RBP7.52□□□□□ -1.21
GYPB-215ENST00000513677 UBE2Q2LH0YL09 131 aa7.51□□□□□ -1.21
GYPB-215ENST00000513677 IRS4O14654 1257 aaPredicted RBP7.51□□□□□ -1.21
GYPB-215ENST00000513677 ITGA6P23229 1130 aa7.51□□□□□ -1.21
GYPB-215ENST00000513677 RPS12P25398 132 aaKnown RBP7.51□□□□□ -1.21
GYPB-215ENST00000513677 EPHA4P54764 986 aa7.51□□□□□ -1.21
GYPB-215ENST00000513677 WDR44Q5JSH3 913 aa7.51□□□□□ -1.21
GYPB-215ENST00000513677 TBCELQ5QJ74 424 aa7.51□□□□□ -1.21
GYPB-215ENST00000513677 PRAMEF18Q5VWM3 479 aa7.51□□□□□ -1.21
GYPB-215ENST00000513677 TREML4Q6UXN2 200 aa7.51□□□□□ -1.21
GYPB-215ENST00000513677 TMC4Q7Z404 712 aa7.51□□□□□ -1.21
GYPB-215ENST00000513677 RASAL3Q86YV0 1011 aa7.51□□□□□ -1.21
GYPB-215ENST00000513677 TBC1D16Q8TBP0 767 aa7.51□□□□□ -1.21
GYPB-215ENST00000513677 JARID2Q92833 1246 aaPredicted RBP7.51□□□□□ -1.21
GYPB-215ENST00000513677 SCHIP1Q9P0W5 487 aaPredicted RBP7.51□□□□□ -1.21
GYPB-215ENST00000513677 DYRK1BQ9Y463 629 aa7.51□□□□□ -1.21
GYPB-215ENST00000513677 SCN9AQ15858 1988 aa7.5□□□□□ -1.21
GYPB-215ENST00000513677 M0R2N6 131 aa7.5□□□□□ -1.21
GYPB-215ENST00000513677 CDK2AP1O14519 115 aa7.5□□□□□ -1.21
GYPB-215ENST00000513677 TMPOP42166 694 aaKnown RBP7.5□□□□□ -1.21
GYPB-215ENST00000513677 LMOD3Q0VAK6 560 aa7.5□□□□□ -1.21
GYPB-215ENST00000513677 PRKG1Q13976 671 aa7.5□□□□□ -1.21
GYPB-215ENST00000513677 LCE2CQ5TA81 110 aa7.5□□□□□ -1.21
GYPB-215ENST00000513677 RIPOR1Q6ZS17 1223 aa7.5□□□□□ -1.21
GYPB-215ENST00000513677 SLC9A9Q8IVB4 645 aa7.5□□□□□ -1.21
GYPB-215ENST00000513677 PLBD2Q8NHP8 589 aa7.5□□□□□ -1.21
GYPB-215ENST00000513677 PBXIP1Q96AQ6 731 aa7.5□□□□□ -1.21
GYPB-215ENST00000513677 NIFKQ9BYG3 293 aaKnown RBP7.5□□□□□ -1.21
GYPB-215ENST00000513677 SEC31BQ9NQW1 1179 aa7.5□□□□□ -1.21
GYPB-215ENST00000513677 GGA1Q9UJY5 639 aa7.5□□□□□ -1.21
GYPB-215ENST00000513677 CDC14CA4D256 554 aa7.49□□□□□ -1.21
GYPB-215ENST00000513677 LGR5O75473 907 aa7.49□□□□□ -1.21
GYPB-215ENST00000513677 VIL1P09327 827 aaKnown RBP7.49□□□□□ -1.21
GYPB-215ENST00000513677 RPS8P62241 208 aaKnown RBP7.49□□□□□ -1.21
GYPB-215ENST00000513677 FOXK2Q01167 660 aa7.49□□□□□ -1.21
GYPB-215ENST00000513677 SF3B3Q15393 1217 aaKnown RBP7.49□□□□□ -1.21
GYPB-215ENST00000513677 ZNF295-AS1Q8N0V1 137 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms