RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 NCKAP5LQ9HCH0 1330 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 CADPSQ9ULU8 1353 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 POTEB2H3BUK9 544 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 TACC1O75410 805 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 IFNA8P32881 189 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 MAGEB6Q8N7X4 407 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 SCYL1Q96KG9 808 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 SYNDIG1LA6NDD5 238 aa9.9□□□□□ -0.83
VCAN-208ENST00000512590 KBTBD13C9JR72 458 aa9.9□□□□□ -0.83
VCAN-208ENST00000512590 MX1P20591 662 aa9.9□□□□□ -0.83
VCAN-208ENST00000512590 SMAP1Q8IYB5 467 aaPredicted RBP9.9□□□□□ -0.83
VCAN-208ENST00000512590 ZNF654Q8IZM8 581 aa9.9□□□□□ -0.83
VCAN-208ENST00000512590 ENGASEQ8NFI3 743 aa9.9□□□□□ -0.83
VCAN-208ENST00000512590 CABLES1Q8TDN4 633 aa9.9□□□□□ -0.83
VCAN-208ENST00000512590 BAG1Q99933 345 aaPredicted RBP9.9□□□□□ -0.83
VCAN-208ENST00000512590 BICDL2A1A5D9 508 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 CAPZA2P47755 286 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 NAA25Q14CX7 972 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 CCDC102BQ68D86 513 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 CHURC1Q8WUH1 139 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 GLT8D2Q9H1C3 349 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 TEKT2Q9UIF3 430 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 ZFYP08048 801 aaPredicted RBP9.89□□□□□ -0.83
VCAN-208ENST00000512590 KRT2P35908 639 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 ZNF174Q15697 407 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 EFCAB13Q8IY85 973 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 SLC12A5Q9H2X9 1139 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 EFCAB14O75071 495 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 SSTR3P32745 418 aaPredicted RBP9.89□□□□□ -0.83
VCAN-208ENST00000512590 CCDC38Q502W7 563 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 LRRC23Q53EV4 343 aaPredicted RBP9.89□□□□□ -0.83
VCAN-208ENST00000512590 LGSNQ5TDP6 509 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 GBP7Q8N8V2 638 aaPredicted RBP9.89□□□□□ -0.83
VCAN-208ENST00000512590 CDC26Q8NHZ8 85 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 SNX25Q9H3E2 840 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.89□□□□□ -0.83
VCAN-208ENST00000512590 BIN1O00499 593 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 APOA4P06727 396 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 PPP2R5AQ15172 486 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 PLCB1Q9NQ66 1216 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 TFIP11Q9UBB9 837 aaKnown RBP9.89□□□□□ -0.83
VCAN-208ENST00000512590 SBNO2Q9Y2G9 1366 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 PRG4Q92954 1404 aaPredicted RBP9.89□□□□□ -0.83
VCAN-208ENST00000512590 TBC1D12O60347 775 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 EIF2B5Q13144 721 aaKnown RBP9.89□□□□□ -0.83
VCAN-208ENST00000512590 KANK4Q5T7N3 995 aaPredicted RBP9.89□□□□□ -0.83
VCAN-208ENST00000512590 FAM102BQ5T8I3 360 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 AFAP1L1Q8TED9 768 aa9.89□□□□□ -0.83
VCAN-208ENST00000512590 PPFIA4O75335 1185 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 RNF8O76064 485 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 LMNB1P20700 586 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 RPAP2Q8IXW5 612 aaPredicted RBP9.88□□□□□ -0.83
VCAN-208ENST00000512590 TRIM45Q9H8W5 580 aaPredicted RBP9.88□□□□□ -0.83
VCAN-208ENST00000512590 FBXL21Q9UKT6 434 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 ZNF215Q9UL58 517 aaPredicted RBP9.88□□□□□ -0.83
VCAN-208ENST00000512590 RABGAP1Q9Y3P9 1069 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 TFRCP02786 760 aaKnown RBP9.88□□□□□ -0.83
VCAN-208ENST00000512590 SLC9C2Q5TAH2 1124 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 ABCC8Q09428 1581 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 RAB44Q7Z6P3 723 aaPredicted RBP9.88□□□□□ -0.83
VCAN-208ENST00000512590 HELBQ8NG08 1087 aaPredicted RBP9.88□□□□□ -0.83
VCAN-208ENST00000512590 CSRNP1Q96S65 589 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 KDM2BQ8NHM5 1336 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 KIF2AO00139 706 aaPredicted RBP9.88□□□□□ -0.83
VCAN-208ENST00000512590 MIER3Q7Z3K6 550 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 WDR17Q8IZU2 1322 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 SECISBP2LQ93073 1101 aaKnown RBP9.88□□□□□ -0.83
VCAN-208ENST00000512590 SH3KBP1Q96B97 665 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 FAM135AQ9P2D6 1515 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 MROH2BQ7Z745 1585 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 ISM2Q6H9L7 571 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 ARMC6Q6NXE6 501 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 NT5DC4Q86YG4 428 aa9.88□□□□□ -0.83
VCAN-208ENST00000512590 PDCD7Q8N8D1 485 aaKnown RBP9.88□□□□□ -0.83
VCAN-208ENST00000512590 KLF18A0A0U1RQI7 1052 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 DENND3A2RUS2 1198 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 FLOT1O75955 427 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 ZNF365Q70YC5 407 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 DDX53Q86TM3 631 aaKnown RBP9.87□□□□□ -0.83
VCAN-208ENST00000512590 SH2B1Q9NRF2 756 aaPredicted RBP9.87□□□□□ -0.83
VCAN-208ENST00000512590 CNOT7Q9UIV1 285 aaKnown RBP9.87□□□□□ -0.83
VCAN-208ENST00000512590 PPP1R9AQ9ULJ8 1098 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 SYNJ2O15056 1496 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 FYB2Q5VWT5 728 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 MTERF4Q7Z6M4 381 aaKnown RBP9.87□□□□□ -0.83
VCAN-208ENST00000512590 CERS3Q8IU89 383 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 RNF139Q8WU17 664 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 CTAGE1Q96RT6 745 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 COG4Q9H9E3 785 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 HSPA4P34932 840 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 LIG4P49917 911 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 PDCD2Q16342 344 aaPredicted RBP9.87□□□□□ -0.83
VCAN-208ENST00000512590 SV2BQ7L1I2 683 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 CEP57Q86XR8 500 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 RAB42Q8N4Z0 105 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 UBLCP1Q8WVY7 318 aaPredicted RBP9.87□□□□□ -0.83
VCAN-208ENST00000512590 PIK3R5Q8WYR1 880 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 NEUROD4Q9HD90 331 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 ERBINQ96RT1 1412 aa9.87□□□□□ -0.83
VCAN-208ENST00000512590 ZNF263O14978 683 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms