RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 IFNAR1P17181 557 aa17.75■□□□□ 0.43
SCLT1-209ENST00000511426 CDK8P49336 464 aa17.75■□□□□ 0.43
SCLT1-209ENST00000511426 RBM5P52756 815 aaKnown RBP eCLIP17.75■□□□□ 0.43
SCLT1-209ENST00000511426 RTN1Q16799 776 aa17.75■□□□□ 0.43
SCLT1-209ENST00000511426 CFAP100Q494V2 611 aa17.75■□□□□ 0.43
SCLT1-209ENST00000511426 FKBP1CQ5VVH2 108 aa17.75■□□□□ 0.43
SCLT1-209ENST00000511426 KLHL34Q8N239 644 aa17.75■□□□□ 0.43
SCLT1-209ENST00000511426 WASF1Q92558 559 aa17.75■□□□□ 0.43
SCLT1-209ENST00000511426 ZSCAN16Q9H4T2 348 aaPredicted RBP17.75■□□□□ 0.43
SCLT1-209ENST00000511426 NCOA5Q9HCD5 579 aaKnown RBP17.75■□□□□ 0.43
SCLT1-209ENST00000511426 TMOD2Q9NZR1 351 aa17.75■□□□□ 0.43
SCLT1-209ENST00000511426 SERPINB13Q9UIV8 391 aa17.75■□□□□ 0.43
SCLT1-209ENST00000511426 MYH1P12882 1939 aa17.75■□□□□ 0.43
SCLT1-209ENST00000511426 RASA1P20936 1047 aa17.74■□□□□ 0.43
SCLT1-209ENST00000511426 TFAP4Q01664 338 aa17.74■□□□□ 0.43
SCLT1-209ENST00000511426 SAP30BPQ9UHR5 308 aaKnown RBP17.74■□□□□ 0.43
SCLT1-209ENST00000511426 H3BQV1 296 aa17.74■□□□□ 0.43
SCLT1-209ENST00000511426 RAD17O75943 681 aa17.74■□□□□ 0.43
SCLT1-209ENST00000511426 PICALMQ13492 652 aa17.74■□□□□ 0.43
SCLT1-209ENST00000511426 CSPP1Q1MSJ5 1256 aa17.74■□□□□ 0.43
SCLT1-209ENST00000511426 IFFO2Q5TF58 517 aa17.74■□□□□ 0.43
SCLT1-209ENST00000511426 STK11IPQ8N1F8 1099 aa17.74■□□□□ 0.43
SCLT1-209ENST00000511426 FANCBQ8NB91 859 aa17.74■□□□□ 0.43
SCLT1-209ENST00000511426 NEDD1Q8NHV4 660 aa17.74■□□□□ 0.43
SCLT1-209ENST00000511426 ZKSCAN3Q9BRR0 538 aa17.74■□□□□ 0.43
SCLT1-209ENST00000511426 DDX4Q9NQI0 724 aaKnown RBP17.74■□□□□ 0.43
SCLT1-209ENST00000511426 VPS37CA5D8V6 355 aaPredicted RBP17.73■□□□□ 0.43
SCLT1-209ENST00000511426 SPDYE2BA6NHP3 402 aa17.73■□□□□ 0.43
SCLT1-209ENST00000511426 SMIM22K7EJ46 135 aa17.73■□□□□ 0.43
SCLT1-209ENST00000511426 SPDYE6P0CI01 402 aa17.73■□□□□ 0.43
SCLT1-209ENST00000511426 NOVP48745 357 aa17.73■□□□□ 0.43
SCLT1-209ENST00000511426 CXCL9Q07325 125 aa17.73■□□□□ 0.43
SCLT1-209ENST00000511426 NTRK3Q16288 839 aa17.73■□□□□ 0.43
SCLT1-209ENST00000511426 TRIM22Q8IYM9 498 aa17.73■□□□□ 0.43
SCLT1-209ENST00000511426 DYNLL2Q96FJ2 89 aa17.73■□□□□ 0.43
SCLT1-209ENST00000511426 CCDC17Q96LX7 622 aa17.73■□□□□ 0.43
SCLT1-209ENST00000511426 ORC3Q9UBD5 711 aaPredicted RBP17.73■□□□□ 0.43
SCLT1-209ENST00000511426 PI4KBQ9UBF8 816 aa17.73■□□□□ 0.43
SCLT1-209ENST00000511426 TROAPQ12815 778 aa17.72■□□□□ 0.43
SCLT1-209ENST00000511426 DLGAP5Q15398 846 aa17.72■□□□□ 0.43
SCLT1-209ENST00000511426 SENP2Q9HC62 589 aa17.72■□□□□ 0.43
SCLT1-209ENST00000511426 ADAMTSL1Q8N6G6 1762 aa17.72■□□□□ 0.43
SCLT1-209ENST00000511426 KIF5BP33176 963 aa17.71■□□□□ 0.43
SCLT1-209ENST00000511426 ATL3Q6DD88 541 aa17.71■□□□□ 0.43
SCLT1-209ENST00000511426 FOXP4Q8IVH2 680 aaPredicted RBP17.71■□□□□ 0.43
SCLT1-209ENST00000511426 DPF2Q92785 391 aa17.71■□□□□ 0.43
SCLT1-209ENST00000511426 DDX11Q96FC9 970 aa17.71■□□□□ 0.43
SCLT1-209ENST00000511426 RNF26Q9BY78 433 aaPredicted RBP17.71■□□□□ 0.43
SCLT1-209ENST00000511426 KAT14Q9H8E8 782 aa17.71■□□□□ 0.43
SCLT1-209ENST00000511426 FAM217BQ9NTX9 383 aaPredicted RBP17.71■□□□□ 0.43
SCLT1-209ENST00000511426 RBM27Q9P2N5 1060 aaKnown RBP17.71■□□□□ 0.43
SCLT1-209ENST00000511426 FZD9O00144 591 aa17.71■□□□□ 0.42
SCLT1-209ENST00000511426 MYO1BO43795 1136 aa17.71■□□□□ 0.42
SCLT1-209ENST00000511426 FMNL1O95466 1100 aaPredicted RBP17.71■□□□□ 0.42
SCLT1-209ENST00000511426 FDPSP14324 419 aaKnown RBP17.71■□□□□ 0.42
SCLT1-209ENST00000511426 CDC27P30260 824 aa17.71■□□□□ 0.42
SCLT1-209ENST00000511426 ADD1P35611 737 aaKnown RBP17.71■□□□□ 0.42
SCLT1-209ENST00000511426 EIF6P56537 245 aaKnown RBP17.71■□□□□ 0.42
SCLT1-209ENST00000511426 FAM47AQ5JRC9 791 aa17.71■□□□□ 0.42
SCLT1-209ENST00000511426 RCSD1Q6JBY9 416 aa17.71■□□□□ 0.42
SCLT1-209ENST00000511426 METTL16Q86W50 562 aaKnown RBP17.71■□□□□ 0.42
SCLT1-209ENST00000511426 TMEM87AQ8NBN3 555 aa17.71■□□□□ 0.42
SCLT1-209ENST00000511426 CTCFLQ8NI51 663 aaPredicted RBP17.71■□□□□ 0.42
SCLT1-209ENST00000511426 FAM198AQ9UFP1 575 aa17.71■□□□□ 0.42
SCLT1-209ENST00000511426 GNAQP50148 359 aa17.7■□□□□ 0.42
SCLT1-209ENST00000511426 EVX2Q03828 476 aa17.7■□□□□ 0.42
SCLT1-209ENST00000511426 SSRP1Q08945 709 aaKnown RBP17.7■□□□□ 0.42
SCLT1-209ENST00000511426 NFIAQ12857 509 aa17.7■□□□□ 0.42
SCLT1-209ENST00000511426 MCTP1Q6DN14 999 aa17.7■□□□□ 0.42
SCLT1-209ENST00000511426 CDC37L1Q7L3B6 337 aa17.7■□□□□ 0.42
SCLT1-209ENST00000511426 NLGN2Q8NFZ4 835 aa17.7■□□□□ 0.42
SCLT1-209ENST00000511426 C8orf76Q96K31 380 aa17.7■□□□□ 0.42
SCLT1-209ENST00000511426 DEXIO95424 95 aa17.69■□□□□ 0.42
SCLT1-209ENST00000511426 ZNF280AP59817 542 aaPredicted RBP17.69■□□□□ 0.42
SCLT1-209ENST00000511426 SPDYE2Q495Y8 402 aa17.69■□□□□ 0.42
SCLT1-209ENST00000511426 FAM83AQ86UY5 434 aa17.69■□□□□ 0.42
SCLT1-209ENST00000511426 FBXO18Q8NFZ0 1043 aa17.69■□□□□ 0.42
SCLT1-209ENST00000511426 NUP133Q8WUM0 1156 aa17.69■□□□□ 0.42
SCLT1-209ENST00000511426 PRMT6Q96LA8 375 aaPredicted RBP17.69■□□□□ 0.42
SCLT1-209ENST00000511426 IL17RBQ9NRM6 502 aa17.69■□□□□ 0.42
SCLT1-209ENST00000511426 SLC44A5Q8NCS7 719 aa17.68■□□□□ 0.42
SCLT1-209ENST00000511426 ZBED3Q96IU2 234 aaPredicted RBP17.68■□□□□ 0.42
SCLT1-209ENST00000511426 TDRD3Q9H7E2 651 aaKnown RBP17.68■□□□□ 0.42
SCLT1-209ENST00000511426 HERC5Q9UII4 1024 aaKnown RBP17.68■□□□□ 0.42
SCLT1-209ENST00000511426 KRT85P78386 507 aa17.67■□□□□ 0.42
SCLT1-209ENST00000511426 FAM177A1Q8N128 213 aaPredicted RBP17.67■□□□□ 0.42
SCLT1-209ENST00000511426 CRACR2BQ8N4Y2 399 aaPredicted RBP17.67■□□□□ 0.42
SCLT1-209ENST00000511426 PNMA1Q8ND90 353 aa17.67■□□□□ 0.42
SCLT1-209ENST00000511426 FAM151AQ8WW52 585 aa17.67■□□□□ 0.42
SCLT1-209ENST00000511426 LZTS2Q9BRK4 669 aa17.67■□□□□ 0.42
SCLT1-209ENST00000511426 MYL10Q9BUA6 226 aa17.67■□□□□ 0.42
SCLT1-209ENST00000511426 TOP1P11387 765 aaKnown RBP17.67■□□□□ 0.42
SCLT1-209ENST00000511426 XBP1P17861 261 aa17.67■□□□□ 0.42
SCLT1-209ENST00000511426 RXRAP19793 462 aa17.67■□□□□ 0.42
SCLT1-209ENST00000511426 LMNB1P20700 586 aa17.67■□□□□ 0.42
SCLT1-209ENST00000511426 AKAP17AQ02040 695 aaKnown RBP17.67■□□□□ 0.42
SCLT1-209ENST00000511426 RESTQ13127 1097 aa17.67■□□□□ 0.42
SCLT1-209ENST00000511426 TRIM29Q14134 588 aa17.67■□□□□ 0.42
SCLT1-209ENST00000511426 SLC4A8Q2Y0W8 1093 aa17.67■□□□□ 0.42
SCLT1-209ENST00000511426 BRAPQ7Z569 592 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms