RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 KANSL2Q9H9L4 492 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 COG5Q9UP83 839 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 USP17L12C9JPN9 530 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 USP17L21D6R901 530 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 POTEB2H3BUK9 544 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 DKC1O60832 514 aaKnown RBP eCLIP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 XRCC5P13010 732 aaKnown RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 GNAQP50148 359 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 HSP90AA2PQ14568 343 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 COG2Q14746 738 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 CCDC96Q2M329 555 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 PRAMEF18Q5VWM3 479 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 PPP4R3AQ6IN85 833 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 TMEM179Q6ZVK1 233 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 IQCA1Q86XH1 822 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 ITPRIPQ8IWB1 547 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 RPAP2Q8IXW5 612 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 ANKRD35Q8N283 1001 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 KIF1BPQ96EK5 621 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 RNPC3Q96LT9 517 aaKnown RBP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 FTOQ9C0B1 505 aaKnown RBP eCLIP3.37□□□□□ -1.87
CLOCK-209ENST00000511124 COG6Q9Y2V7 657 aa3.37□□□□□ -1.87
CLOCK-209ENST00000511124 WDR90Q96KV7 1748 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 ADGRA2Q96PE1 1338 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 NR1I2O75469 434 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 AKR1A1P14550 325 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 FOSL2P15408 326 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 CYP2B6P20813 491 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 RFC2P35250 354 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 TCP10Q12799 353 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 CRHR2Q13324 411 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 GNPTABQ3T906 1256 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 VPS53Q5VIR6 699 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 TSEN34Q9BSV6 310 aaKnown RBP3.36□□□□□ -1.87
CLOCK-209ENST00000511124 GREM2Q9H772 168 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 PUF60Q9UHX1 559 aaKnown RBP3.36□□□□□ -1.87
CLOCK-209ENST00000511124 CPA4Q9UI42 421 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 ATP11BQ9Y2G3 1177 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 SBF2Q86WG5 1849 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 RBBP6Q7Z6E9 1792 aaKnown RBP3.36□□□□□ -1.87
CLOCK-209ENST00000511124 ZNF609O15014 1411 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 MOXD2PA6NHM9 499 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 TRIM75PA6NK02 468 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 TBC1D12O60347 775 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 MYCP01106 439 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-209ENST00000511124 INHAP05111 366 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 PCP11498 1178 aaKnown RBP3.36□□□□□ -1.87
CLOCK-209ENST00000511124 ALADP13716 330 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 TRIM21P19474 475 aaKnown RBP3.36□□□□□ -1.87
CLOCK-209ENST00000511124 BTDP43251 543 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 GJA8P48165 433 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 EXOSC9Q06265 439 aaKnown RBP3.36□□□□□ -1.87
CLOCK-209ENST00000511124 SPP2Q13103 211 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 CHST13Q8NET6 341 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 RSPH1Q8WYR4 309 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 MMP19Q99542 508 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 BCL11AQ9H165 835 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 STARD7Q9NQZ5 370 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 POLLQ9UGP5 575 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 R3HCC1Q9Y3T6 440 aaKnown RBP3.36□□□□□ -1.87
CLOCK-209ENST00000511124 CCER2I3L3R5 266 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 WDR46O15213 610 aaKnown RBP3.36□□□□□ -1.87
CLOCK-209ENST00000511124 KCNQ3O43525 872 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 FLOT1O75955 427 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 ANXA1P04083 346 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 MCCP23508 829 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 FLT3LGP49771 235 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 RGS3P49796 1198 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 RAB3GAP1Q15042 981 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 FAM47CQ5HY64 1035 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 FAM109BQ6ICB4 259 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-209ENST00000511124 RALYLQ86SE5 291 aaKnown RBP3.36□□□□□ -1.87
CLOCK-209ENST00000511124 SUGP1Q8IWZ8 645 aaKnown RBP3.36□□□□□ -1.87
CLOCK-209ENST00000511124 ABRAQ8N0Z2 381 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 SAMD3Q8N6K7 520 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 WDR18Q9BV38 432 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 PRKRIP1Q9H875 184 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-209ENST00000511124 ATP8A2Q9NTI2 1148 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 STK39Q9UEW8 545 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 SERPINB13Q9UIV8 391 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 PTCH2Q9Y6C5 1203 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 ZNF831Q5JPB2 1677 aa3.36□□□□□ -1.87
CLOCK-209ENST00000511124 STAG3L1P0CL83 205 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 EXOC8Q8IYI6 725 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 TDHQ8IZJ6 230 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 CDHR1Q96JP9 859 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 C22orf23Q9BZE7 217 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 SEC31BQ9NQW1 1179 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 ARPP21Q9UBL0 812 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-209ENST00000511124 ZHX1Q9UKY1 873 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-209ENST00000511124 LRFN2Q9ULH4 789 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 SYNPO2Q9UMS6 1093 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 ADAMTS8Q9UP79 889 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 DIS3Q9Y2L1 958 aaKnown RBP3.35□□□□□ -1.87
CLOCK-209ENST00000511124 KIF3AQ9Y496 699 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 LY75O60449 1722 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 PFASO15067 1338 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 PKD1L3Q7Z443 1732 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 A0A0U1RQG5 324 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-209ENST00000511124 ZBTB7BO15156 539 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms