RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 C8orf74Q6P047 294 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 TEX11Q8IYF3 940 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 PPP1R14CQ8TAE6 165 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 GABPB2Q8TAK5 448 aaPredicted RBP10.33□□□□□ -0.76
TRIO-214ENST00000509967 RUNDC3BQ96NL0 473 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 SYNCQ9H7C4 482 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 RAB11FIP4Q86YS3 637 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 MAP4K1Q92918 833 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 PLCD4Q9BRC7 762 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 MTMR6Q9Y217 621 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 ABCC3O15438 1527 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 ADCY9O60503 1353 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 N4BP1O75113 896 aaKnown RBP10.33□□□□□ -0.76
TRIO-214ENST00000509967 LIG1P18858 919 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 SEMA3FQ13275 785 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 TMEM87AQ8NBN3 555 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 SMC6Q96SB8 1091 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 TRIM7Q9C029 511 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 RTEL1Q9NZ71 1219 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 ATP6V0A2Q9Y487 856 aa10.33□□□□□ -0.76
TRIO-214ENST00000509967 H0YCG3 227 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 PPFIA4O75335 1185 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 ERCC5P28715 1186 aaPredicted RBP10.32□□□□□ -0.76
TRIO-214ENST00000509967 PDE6BP35913 854 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 MAP3K9P80192 1104 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 PPP1R2P3Q6NXS1 205 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 TAOK1Q7L7X3 1001 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 TMC4Q7Z404 712 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 SLC17A8Q8NDX2 589 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 TRIM58Q8NG06 486 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 CCDC110Q8TBZ0 833 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 ATP8A2Q9NTI2 1148 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 H7C1D1 291 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 NBPF14Q5TI25 921 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 OTUD7AQ8TE49 926 aaPredicted RBP10.32□□□□□ -0.76
TRIO-214ENST00000509967 FBF1Q8TES7 1133 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 SPDYE4A6NLX3 237 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 EFCAB8A8MWE9 144 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 TRAF5O00463 557 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 CCT6AP40227 531 aaKnown RBP10.32□□□□□ -0.76
TRIO-214ENST00000509967 MNAT1P51948 309 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 CFAP221Q4G0U5 840 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 WDR44Q5JSH3 913 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 NOSTRINQ8IVI9 506 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 C10orf67Q8IYJ2 551 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 ATRIPQ8WXE1 791 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 FAM227BQ96M60 508 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 MTA3Q9BTC8 594 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 LZTFL1Q9NQ48 299 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 NKIRAS1Q9NYS0 192 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 NFE2L3Q9Y4A8 694 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 PARP3Q9Y6F1 533 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 MRVI1Q9Y6F6 885 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 CDC42BPBQ9Y5S2 1711 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 ABCD1P33897 745 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 LONP1P36776 959 aaKnown RBP10.32□□□□□ -0.76
TRIO-214ENST00000509967 DNM2P50570 870 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 TTC31Q49AM3 519 aaPredicted RBP10.32□□□□□ -0.76
TRIO-214ENST00000509967 CDAN1Q8IWY9 1227 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 RETREG2Q8NC44 543 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 UTP11Q9Y3A2 253 aaKnown RBP10.32□□□□□ -0.76
TRIO-214ENST00000509967 LMTK2Q8IWU2 1503 aa10.32□□□□□ -0.76
TRIO-214ENST00000509967 DNA2P51530 1060 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 CDC37L1Q7L3B6 337 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 HAUS4Q9H6D7 363 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 ZSWIM4Q9H7M6 989 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 POLR3EQ9NVU0 708 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 VPS18Q9P253 973 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 GGA1Q9UJY5 639 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 RIOK3O14730 519 aaKnown RBP10.31□□□□□ -0.76
TRIO-214ENST00000509967 GTPBP6O43824 516 aaPredicted RBP10.31□□□□□ -0.76
TRIO-214ENST00000509967 CTSWP56202 376 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 CNBD1Q8NA66 436 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 ZBTB38Q8NAP3 1195 aaPredicted RBP10.31□□□□□ -0.76
TRIO-214ENST00000509967 C8orf37Q96NL8 207 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 LSG1Q9H089 658 aaKnown RBP10.31□□□□□ -0.76
TRIO-214ENST00000509967 RSPH14Q9UHP6 348 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 WDR19Q8NEZ3 1342 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 POLR2DO15514 142 aaKnown RBP10.31□□□□□ -0.76
TRIO-214ENST00000509967 BCRP11274 1271 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 PHKG2P15735 406 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 YWHAEP62258 255 aaKnown RBP10.31□□□□□ -0.76
TRIO-214ENST00000509967 GRIPAP1Q4V328 841 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 TRAPPC3LQ5T215 181 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 CPLX4Q7Z7G2 160 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 RAB17Q9H0T7 212 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 RASSF4Q9H2L5 321 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 MED4Q9NPJ6 270 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 TMEM63CQ9P1W3 806 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 LRWD1Q9UFC0 647 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 SOS2Q07890 1332 aaPredicted RBP10.31□□□□□ -0.76
TRIO-214ENST00000509967 ABCC12Q96J65 1359 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 SPHKAPQ2M3C7 1700 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 CDC42BPGQ6DT37 1551 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 PABPN1LA6NDY0 278 aaKnown RBP10.31□□□□□ -0.76
TRIO-214ENST00000509967 TNFAIP3P21580 790 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 LACTBP83111 547 aaPredicted RBP10.31□□□□□ -0.76
TRIO-214ENST00000509967 UBE4AQ14139 1066 aa10.31□□□□□ -0.76
TRIO-214ENST00000509967 KARSQ15046 597 aaKnown RBP10.31□□□□□ -0.76
TRIO-214ENST00000509967 ME3Q16798 604 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms